MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-238L13
Chromosome	4 (Build37)
Map Location	56,664,685 - 56,798,879
singlet/doublet	doublet
Overlap gene	Actl7b, Actl7a, Ikbkap
Upstream gene	none
Downstream gene	BC026590, Ctnnal1, D730040F13Rik, 6430704M03Rik, Epb4.1l4b, Ptpn3, LOC100041460, 1700042G15Rik, LOC100041342, LOC619973, LOC667049, Palm2, LOC100041513
Link	Open Mouse BAC browser

Click to get alignment info.

name	Actl7b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11471 MGI:1343053
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Actl7a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11470 MGI:1343051
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ikbkap (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230233 MGI:1914544
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC026590 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230234 MGI:2677850
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ctnnal1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54366 MGI:1859649
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D730040F13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:242474 MGI:2445107
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	6430704M03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230235 MGI:2442704
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 9 ESTs, 2 Proteins

name	Epb4.1l4b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54357 MGI:1859149
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 94 ESTs, 4 Proteins

name	Ptpn3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:545622 MGI:105307
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041460 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041460
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	1700042G15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73349 MGI:1920599
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs

name	LOC100041342 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041342
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 101 mRNAs, 1906 ESTs, 1 Protein

name	LOC619973 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:619973
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 11 Proteins

name	LOC667049 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667049
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Palm2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:242481 MGI:1934601
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041513 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041513
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Actl7b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23956123 GeneID:11471 MGI:1343053
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : actin-like 7b transcript_id : NM_025271.1

name	Actl7a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350072 GeneID:11470 MGI:1343051
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : actin-like 7a transcript_id : NM_009611.2

name	Ikbkap (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368357 GeneID:230233 MGI:1914544
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : inhibitor of kappa light polypeptide enhancer in B-cells, kinase complex-associated protein transcript_id : NM_026079.2

name	BC026590 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487244 GeneID:230234 MGI:2677850
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC026590 transcript_id : NM_001081420.1

name	Ctnnal1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542342 GeneID:54366 MGI:1859649
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : catenin (cadherin associated protein), alpha-like 1 transcript_id : NM_018761.2

name	D730040F13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126723477 GeneID:242474 MGI:2445107
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D730040F13 gene transcript_id : NM_175518.4

name	Epb4.1l4b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149252408 GeneID:54357 MGI:1859149
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 ESTs, 2 Proteins product : erythrocyte protein band 4.1-like 4b, transcript variant 1 transcript_id : XM_001476161.1

name	Epb4.1l4b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149252410 GeneID:54357 MGI:1859149
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 94 ESTs, 2 Proteins product : erythrocyte protein band 4.1-like 4b, transcript variant 2 transcript_id : XM_001476174.1

name	Ptpn3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114326174 GeneID:545622 MGI:105307
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein tyrosine phosphatase, non-receptor type 3 transcript_id : NM_011207.1

name	1700042G15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149252414 GeneID:73349 MGI:1920599
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs product : RIKEN cDNA 1700042G15 gene transcript_id : XM_001476256.1

name	LOC100041342 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252412 GeneID:100041342
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 101 mRNAs, 1906 ESTs, 1 Protein product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) transcript_id : XM_001476225.1

name	LOC619973 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252418 GeneID:619973
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 11 Proteins product : similar to LRRGT00183 transcript_id : XM_884359.3

name	Palm2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:93004083 GeneID:242481 MGI:1934601
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : paralemmin 2 transcript_id : NM_172868.2

name	Actl7b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956124 CCDS:CCDS18196.1 GeneID:11471 MGI:1343053
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005856 - cytoskeleton [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA]; GO:0005200 - structural constituent of cytoskeleton [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0007010 - cytoskeleton organization and biogenesis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : t-actin 1 product : actin-like 7b protein_id : NP_079547.1

name	Actl7a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6752956 CCDS:CCDS18197.1 GeneID:11470 MGI:1343051
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0009434 - flagellum (sensu Eukaryota) [Evidence IDA]; GO:0001673 - male germ cell nucleus [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IEA]; GO:0005200 - structural constituent of cytoskeleton [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0007010 - cytoskeleton organization and biogenesis [Evidence IEA] codon_start : 1 note : t-actin 2; actin-like Tact2 product : actin-like 7a protein_id : NP_033741.1

name	Ikbkap (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27734086 GeneID:230233 MGI:1914544
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : unclassified translation discrepancy note : IKK-complex-associated protein IKAP product : inhibitor of kappa light polypeptide enhancer in B-cells, kinase complex-associated protein protein_id : NP_080355.1

name	BC026590 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487245 GeneID:230234 MGI:2677850
definition	codon_start : 1 product : hypothetical protein LOC230234 protein_id : NP_001074889.1

name	Ctnnal1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542343 CCDS:CCDS18200.1 GeneID:54366 MGI:1859649
definition	GO_component : GO:0015629 - actin cytoskeleton [Evidence IEA]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005829 - cytosol [Evidence ISS] GO_function : GO:0045296 - cadherin binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0007266 - Rho protein signal transduction [Evidence ISS] codon_start : 1 exception : mismatches in translation note : alpha-catenin related protein; catenin alpha-like 1 product : catenin (cadherin associated protein), alpha-like 1 protein_id : NP_061231.2

name	D730040F13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126723478 GeneID:242474 MGI:2445107
definition	codon_start : 1 product : hypothetical protein LOC242474 protein_id : NP_780727.3

name	Epb4.1l4b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149252409 GeneID:54357 MGI:1859149
definition	codon_start : 1 product : erythrocyte protein band 4.1-like 4b isoform 1 protein_id : XP_001476211.1

name	Epb4.1l4b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149252411 GeneID:54357 MGI:1859149
definition	codon_start : 1 product : erythrocyte protein band 4.1-like 4b isoform 2 protein_id : XP_001476224.1

name	Ptpn3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114326175 GeneID:545622 MGI:105307
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0000062 - acyl-CoA binding [Evidence IEA]; GO:0005488 - binding [Evidence IEA]; GO:0008092 - cytoskeletal protein binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0004725 - protein tyrosine phosphatase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006470 - protein amino acid dephosphorylation [Evidence IEA] codon_start : 1 note : protein-tyrosine phosphatase H1 product : protein tyrosine phosphatase, non-receptor type 3 protein_id : NP_035337.1

name	1700042G15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149252415 GeneID:73349 MGI:1920599
definition	codon_start : 1 product : hypothetical protein LOC73349 protein_id : XP_001476306.1

name	LOC100041342 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252413 GeneID:100041342
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) protein_id : XP_001476275.1

name	LOC619973 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252419 GeneID:619973
definition	codon_start : 1 product : similar to LRRGT00183 protein_id : XP_889452.2

name	Palm2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27777697 CCDS:CCDS18202.1 GeneID:242481 MGI:1934601
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : paralemmin 2 protein_id : NP_766456.1

name	LOC100041460 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041460
definition	number : 6 pseudo : _no_value

name	LOC100041460 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041460
definition	number : 5 pseudo : _no_value

name	LOC100041460 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041460
definition	number : 4 pseudo : _no_value

name	LOC100041460 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041460
definition	number : 3 pseudo : _no_value

name	LOC100041460 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041460
definition	number : 2 pseudo : _no_value

name	LOC100041460 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041460
definition	number : 1 pseudo : _no_value

name	LOC667049 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667049
definition	number : 5 pseudo : _no_value

name	LOC667049 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667049
definition	number : 4 pseudo : _no_value

name	LOC667049 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667049
definition	number : 3 pseudo : _no_value

name	LOC667049 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667049
definition	number : 2 pseudo : _no_value

name	LOC667049 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667049
definition	number : 1 pseudo : _no_value

name	LOC100041513 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041513
definition	number : 1 pseudo : _no_value

name	LOC100041513 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041513
definition	number : 2 pseudo : _no_value

name	6430704M03Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149252405 GeneID:230235 MGI:2442704
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 9 ESTs, 2 Proteins product : RIKEN cDNA 6430704M03 gene transcript_id : XR_001596.2

clone name	MSMg01-288P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-204C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-206G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513M11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-400G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-201C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-206G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248M23
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-238L13.b	B6Ng01-238L13.g
ACC	GA049343	GA049344
length	680	74
definition	B6Ng01-238L13.b	B6Ng01-238L13.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(56,798,204 - 56,798,879)	(56,664,685 - 56,664,758)
sequence	gaattctctggacagatcaccagctcctctgatttcagtcccacatggta cagtgctattgcagtctttctccatgtctgaaaccagctttcaaatcagt aatgctcgcatgttcattgttgagtcgcatggtatatcctctggcaagtg ctgtgcggcaaggttggtatagcataacataggaagactgtgagcaggat ggtagactgttgggggagggtgtcccaaggaaggcttctcggtgtttgag cacattcctgctgagaatccgagagggagatcgcatgtgtggctaagagc attctaagcattcagaagcagctatagtgatgtcttttgttgcattttga aacagctagacagccagtgactgcaggaagacagagggggagagaggggt gggcggggcatagggatggcagagaatagctctttcagggtcttgaaggt ccttattctgaatgaggtagttgtcattaaagagttggaacagggtgcag tgttctggctattttagaggattatagtacctgctgtgttaggaaactag atctacagtgaaaaagagtggtgccccaccctgcaagacagggttttctc ctgtagcctaggctgatctggaaattcctttttaaaaaattaatttattt tatttatttttaatttaatgctttttttaa	attggggattatcttttctttggaaaaagaaagggtgggaggagggaagg aaggaagggaaggagggatgggag
quality values	Open. Hide. 58 33 28 29 58 58 58 58 58 58 58 34 46 34 58 41 42 36 39 58 42 31 58 58 58 62 62 62 62 62 62 38 37 47 36 22 16 19 56 47 46 62 43 62 43 62 62 62 54 62 62 47 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 59 62 62 62 62 62 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 62 59 59 62 49 54 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 59 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 56 51 59 36 59 59 62 51 43 44 59 56 44 62 59 59 22 28 43 44 44 44 43 45 44 39 38 29 44 39 51 56 56 44 62 62 62 62 47 56 62 56 56 44 56 38 56 44 47 42 51 51 47 51 51 42 56 56 51 51 51 31 47 34 42 42 37 32 40 39 38 33 30 41 37 40 56 51 51 24 39 56 31 20 39 42 56 56 38 42 42 39 38 39 51 39 20 56 39 47 34 26 10 12 13 15 24 33 46 47 43 46 56 39 50 46 47 56 43 38 31 23 50 56 56 62 56 62 47 56 47 56 46 39 28 30 22 24 30 42 15 38 24 28 30 33 62 33 32 41 32 31 43 42 47 27 23 16 22 28 27 42 46 42 46 41 23 43 22 27 18 28 38 25 46 33 38 27 31 25 20 14 28 27 14 14 21 25 20 23 13 28 19 39 42 7 14 15 15 27 30 32 50 16 35 20 18 16 11 17 12 9 11 8 9 11 16 22 26 19 24 16 13 9 14 20 13 13 8 11 11 13 21 18 19 22 24 27 33 22 25 20 9 22 22 17 25 19 25 39 35 25 52 19 15 19 33 14 12 18	Open. Hide. 27 49 58 58 22 21 24 15 6 12 11 11 34 42 47 41 58 58 54 58 58 58 32 52 58 58 58 54 54 58 58 58 58 58 28 34 58 58 58 58 58 58 58 58 58 58 58 58 54 62 52 43 34 22 31 26 24 46 52 62 62 62 62 62 62 62 62 42 38 52 24 15 8 7

Alignment Information

BAC End 1

BAC End 2

seq1: chr4_56798204_56798879
seq2: B6Ng01-238L13.b_46_725 (reverse)

seq1  TTAAAAAAAGCATTTAAATAAAAATAAAT-AAATAAA-TAATTTTTAAAA  48
      |||||||||||||| || ||||||||||| ||||||| |||||||| |||
seq2  TTAAAAAAAGCATTAAATTAAAAATAAATAAAATAAATTAATTTTTTAAA  50

seq1  AAGGAA-TTCCAGAACAGCCTAGGCTACAGGAG-AAACCCTGTCTTGCAG  96
      |||||| ||||||| |||||||||||||||||| ||||||||||||||||
seq2  AAGGAATTTCCAGATCAGCCTAGGCTACAGGAGAAAACCCTGTCTTGCAG  100

seq1  GGTGGGGCACCACTCTTTTTCACTGTAGATCTAGTTTCCTAACACAGCAG  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGGCACCACTCTTTTTCACTGTAGATCTAGTTTCCTAACACAGCAG  150

seq1  GTACTATAATCCTCTAAAATAGCCAGAACACTGCACCCTGTTCCAACTCT  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTATAATCCTCTAAAATAGCCAGAACACTGCACCCTGTTCCAACTCT  200

seq1  TTAATGACAACTACCTCATTCAGAATAAGGACCTTCAAGACCCTGAAAGA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGACAACTACCTCATTCAGAATAAGGACCTTCAAGACCCTGAAAGA  250

seq1  GCTATTCTCTGCCATCCCTATGCCCCGCCCACCCCTCTCTCCCCCTCTGT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTCTCTGCCATCCCTATGCCCCGCCCACCCCTCTCTCCCCCTCTGT  300

seq1  CTTCCTGCAGTCACTGGCTGTCTAGCTGTTTCAAAATGCAACAAAAGACA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTGCAGTCACTGGCTGTCTAGCTGTTTCAAAATGCAACAAAAGACA  350

seq1  TCACTATAGCTGCTTCTGAATGCTTAGAATGCTCTTAGCCACACATGCGA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTATAGCTGCTTCTGAATGCTTAGAATGCTCTTAGCCACACATGCGA  400

seq1  TCTCCCTCTCGGATTCTCAGCAGGAATGTGCTCAAACACCGAGAAGCCTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTCTCGGATTCTCAGCAGGAATGTGCTCAAACACCGAGAAGCCTT  450

seq1  CCTTGGGACACCCTCCCCCAACAGTCTACCATCCTGCTCACAGTCTTCCT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGGACACCCTCCCCCAACAGTCTACCATCCTGCTCACAGTCTTCCT  500

seq1  ATGTTATGCTATACCAACCTTGCCGCACAGCACTTGCCAGAGGATATACC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTATGCTATACCAACCTTGCCGCACAGCACTTGCCAGAGGATATACC  550

seq1  ATGCGACTCAACAATGAACATGCGAGCATTACTGATTTGAAAGCTGGTTT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCGACTCAACAATGAACATGCGAGCATTACTGATTTGAAAGCTGGTTT  600

seq1  CAGACATGGAGAAAGACTGCAATAGCACTGTACCATGTGGGACTGAAATC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACATGGAGAAAGACTGCAATAGCACTGTACCATGTGGGACTGAAATC  650

seq1  AGAGGAGCTGGTGATCTGTCCAGAGAATTC  676
      ||||||||||||||||||||||||||||||
seq2  AGAGGAGCTGGTGATCTGTCCAGAGAATTC  680

seq1: chr4_56664685_56664758
seq2: B6Ng01-238L13.g_75_148

seq1  ATTGGGGATTATCTTTTCTTTGGAAAAAGAAAGGGTGGGAGGAGGGAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGGATTATCTTTTCTTTGGAAAAAGAAAGGGTGGGAGGAGGGAAGG  50

seq1  AAGGAAGGGAAGGAGGGATGGGAG  74
      ||||||||||||||||||||||||
seq2  AAGGAAGGGAAGGAGGGATGGGAG  74

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information