MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-238M05
Chromosome	4 (Build37)
Map Location	108,804,196 - 108,897,758
singlet/doublet	doublet
Overlap gene	none
Upstream gene	Echdc2, Zyg11a, Zyg11b, LOC100040252, 2010305A19Rik, LOC545667, Gpx7, LOC665728, Zcchc11, LOC100040110, Prpf38a, Orc1l, Cc2d1b, Zfyve9, LOC100040326, 3110021N24Rik, Btf3l4, Txndc12, Kti12, Rab3b, Nrd1, Osbpl9
Downstream gene	Calr4, Eps15, LOC666144, 4922503N01Rik, Rnf11, 4930522H14Rik, Cdkn2c, LOC100040307, Faf1, Dmrta2, Elavl4
Link	Open Mouse BAC browser

Click to get alignment info.

name	Echdc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52430 MGI:1289238
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zyg11a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230590 MGI:2446208
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 2 Proteins

name	Zyg11b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:414872 MGI:2685277
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040252 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040252
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	2010305A19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69893 MGI:1917143
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC545667 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545667
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins

name	Gpx7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67305 MGI:1914555
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665728 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665728
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	Zcchc11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230594 MGI:2445126
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040110 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040110
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Prpf38a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230596 MGI:1916962
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Orc1l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18392 MGI:1328337
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Cc2d1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319965 MGI:2443076
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfyve9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230597 MGI:2652838
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040326 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040326
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	3110021N24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73133 MGI:1920383
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs

name	Btf3l4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70533 MGI:1915312
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Txndc12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66073 MGI:1913323
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kti12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:100087 MGI:1923547
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rab3b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69908 MGI:1917158
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nrd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230598 MGI:1201386
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Osbpl9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:100273 MGI:1923784
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Calr4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108802 MGI:2140435
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Eps15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13858 MGI:104583
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666144 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666144
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 327 ESTs, 2 Proteins pseudo : _no_value

name	4922503N01Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230603 MGI:2444350
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rnf11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:29864 MGI:1352759
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930522H14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67646 MGI:1914896
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cdkn2c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12580 MGI:105388
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040307 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040307
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Faf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14084 MGI:109419
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dmrta2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:242620 MGI:2653629
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Elavl4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15572 MGI:107427
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Echdc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142349919 GeneID:52430 MGI:1289238
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : enoyl Coenzyme A hydratase domain containing 2 transcript_id : NM_026728.2

name	Zyg11a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149252841 GeneID:230590 MGI:2446208
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 2 Proteins product : zyg-11 homolog A (C. elegans) transcript_id : XM_131619.6

name	Zyg11b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142354695 GeneID:414872 MGI:2685277
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zyg-ll homolog B (C. elegans) transcript_id : NM_001033634.2

name	2010305A19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371762 GeneID:69893 MGI:1917143
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2010305A19 gene transcript_id : NM_027250.3

name	LOC545667 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252832 GeneID:545667
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins product : hypothetical LOC545667 transcript_id : XM_620088.4

name	Gpx7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366038 GeneID:67305 MGI:1914555
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutathione peroxidase 7 transcript_id : NM_024198.3

name	Zcchc11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83977460 GeneID:230594 MGI:2445126
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, CCHC domain containing 11 transcript_id : NM_175472.3

name	Prpf38a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385028 GeneID:230596 MGI:1916962
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PRP38 pre-mRNA processing factor 38 (yeast) domain containing A transcript_id : NM_172697.2

name	Orc1l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754943 GeneID:18392 MGI:1328337
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : origin recognition complex, subunit 1-like (S.cereviaiae) transcript_id : NM_011015.1

name	Orc1l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:62460373 GeneID:18392 MGI:1328337
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : origin recognition complex, subunit 1-like (S.cereviaiae) transcript_id : NM_001014425.1

name	Cc2d1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142373435 GeneID:319965 MGI:2443076
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil and C2 domain containing 1B transcript_id : NM_177045.3

name	Zfyve9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119508809 GeneID:230597 MGI:2652838
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, FYVE domain containing 9 transcript_id : NM_183300.2

name	3110021N24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149252839 GeneID:73133 MGI:1920383
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs product : RIKEN cDNA 3110021N24 gene transcript_id : XM_897870.3

name	Btf3l4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892989 GeneID:70533 MGI:1915312
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : basic transcription factor 3-like 4 transcript_id : NM_027453.2

name	Txndc12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130370 GeneID:66073 MGI:1913323
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thioredoxin domain containing 12 (endoplasmic reticulum) transcript_id : NM_025334.3

name	Kti12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803069 GeneID:100087 MGI:1923547
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : KTI12 homolog, chromatin associated (S. cerevisiae) transcript_id : NM_029571.2

name	Rab3b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130330 GeneID:69908 MGI:1917158
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAB3B, member RAS oncogene family transcript_id : NM_023537.5

name	Nrd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31559917 GeneID:230598 MGI:1201386
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nardilysin, N-arginine dibasic convertase, NRD convertase 1 transcript_id : NM_146150.2

name	Osbpl9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27597099 GeneID:100273 MGI:1923784
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : oxysterol binding protein-like 9 transcript_id : NM_173350.1

name	Osbpl9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385216 GeneID:100273 MGI:1923784
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : oxysterol binding protein-like 9 transcript_id : NM_133885.2

name	Calr4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803566 GeneID:108802 MGI:2140435
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calreticulin 4 transcript_id : NM_001033226.2

name	Eps15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375587 GeneID:13858 MGI:104583
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : epidermal growth factor receptor pathway substrate 15 transcript_id : NM_007943.2

name	4922503N01Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23510250 GeneID:230603 MGI:2444350
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4922503N01 gene transcript_id : NM_153392.1

name	Rnf11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892912 GeneID:29864 MGI:1352759
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ring finger protein 11 transcript_id : NM_013876.3

name	4930522H14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367097 GeneID:67646 MGI:1914896
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930522H14 gene transcript_id : NM_026291.2

name	Cdkn2c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982862 GeneID:12580 MGI:105388
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) transcript_id : NM_007671.2

name	LOC100040307 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252844 GeneID:100040307
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : hypothetical protein LOC100040307 transcript_id : XM_001475212.1

name	Faf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40789279 GeneID:14084 MGI:109419
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Fas-associated factor 1 transcript_id : NM_007983.2

name	Dmrta2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112821684 GeneID:242620 MGI:2653629
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : doublesex and mab-3 related transcription factor like family A2 transcript_id : NM_172296.2

name	Elavl4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84662763 GeneID:15572 MGI:107427
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D) transcript_id : NM_001038698.1

name	Elavl4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112181304 GeneID:15572 MGI:107427
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D) transcript_id : NM_010488.3

name	Echdc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312020 CCDS:CCDS18447.1 GeneID:52430 MGI:1289238
definition	GO_function : GO:0003824 - catalytic activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation product : enoyl Coenzyme A hydratase domain containing 2 protein_id : NP_081004.1

name	Zyg11a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149252842 GeneID:230590 MGI:2446208
definition	codon_start : 1 product : hypothetical protein protein_id : XP_131619.5

name	Zyg11b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702061 CCDS:CCDS18448.1 GeneID:414872 MGI:2685277
definition	GO_function : GO:0005488 - binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : zyg-ll homolog B protein_id : NP_001028806.1

name	2010305A19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28076933 CCDS:CCDS18449.1 GeneID:69893 MGI:1917143
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : hypothetical protein LOC69893 protein_id : NP_081526.1

name	LOC545667 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252833 GeneID:545667
definition	codon_start : 1 product : hypothetical protein protein_id : XP_620088.4

name	Gpx7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13195626 CCDS:CCDS18450.1 GeneID:67305 MGI:1914555
definition	GO_function : GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006979 - response to oxidative stress [Evidence IEA] codon_start : 1 product : glutathione peroxidase 7 protein_id : NP_077160.1

name	Zcchc11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83977461 CCDS:CCDS18451.1 GeneID:230594 MGI:2445126
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] codon_start : 1 product : zinc finger, CCHC domain containing 11 protein_id : NP_780681.2

name	Prpf38a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370014 CCDS:CCDS18452.1 GeneID:230596 MGI:1916962
definition	codon_start : 1 exception : mismatches in translation product : PRP38 pre-mRNA processing factor 38 (yeast) domain containing A protein_id : NP_766285.1

name	Orc1l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754944 CCDS:CCDS18453.1 GeneID:18392 MGI:1328337
definition	GO_component : GO:0005634 - nucleus [Evidence TAS] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence TAS]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA] GO_process : GO:0006260 - DNA replication [Evidence TAS] codon_start : 1 exception : mismatches in translation function : involved in initiation of DNA replication note : isoform A is encoded by transcript variant A product : origin recognition complex, subunit 1 isoform A protein_id : NP_035145.1

name	Orc1l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62460374 GeneID:18392 MGI:1328337
definition	GO_component : GO:0005634 - nucleus [Evidence TAS] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence TAS]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA] GO_process : GO:0006260 - DNA replication [Evidence TAS] codon_start : 1 exception : mismatches in translation note : isoform B is encoded by transcript variant B product : origin recognition complex, subunit 1 isoform B protein_id : NP_001014425.1

name	Cc2d1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28892935 CCDS:CCDS18454.1 GeneID:319965 MGI:2443076
definition	codon_start : 1 product : coiled-coil and C2 domain containing 1B protein_id : NP_796019.1

name	Zfyve9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119508810 GeneID:230597 MGI:2652838
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS] GO_function : GO:0046332 - SMAD binding [Evidence ISS] GO_process : GO:0017015 - regulation of transforming growth factor beta receptor signaling pathway [Evidence ISS] codon_start : 1 note : MAD, mothers against decapentaplegic homolog (Drosophila) interacting protein, receptor activation anchor product : zinc finger, FYVE domain containing 9 protein_id : NP_899123.2

name	3110021N24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82894472 GeneID:73133 MGI:1920383
definition	codon_start : 1 product : hypothetical protein LOC73133 protein_id : XP_902963.1

name	Btf3l4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29789195 CCDS:CCDS18456.1 GeneID:70533 MGI:1915312
definition	codon_start : 1 note : novel protein similar to basic transcription factor 3 Btf3 product : basic transcription factor 3-like 4 protein_id : NP_081729.1

name	Txndc12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384700 CCDS:CCDS18457.1 GeneID:66073 MGI:1913323
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA] GO_function : GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0015035 - protein disulfide oxidoreductase activity [Evidence IEA]; GO:0019153 - protein-disulfide reductase (glutathione) activity [Evidence IEA] codon_start : 1 note : ortholog of endoplasmic reticulum thioredoxin superfamily member, 18 kDa TLP19 product : endoplasmic reticulum protein ERp19 protein_id : NP_079610.1

name	Kti12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20270210 CCDS:CCDS18458.1 GeneID:100087 MGI:1923547
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA] codon_start : 1 product : KTI12 homolog, chromatin associated protein_id : NP_083847.1

name	Rab3b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12963723 CCDS:CCDS18459.1 GeneID:69908 MGI:1917158
definition	GO_component : GO:0031045 - dense core granule [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0008021 - synaptic vesicle [Evidence IDA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0017157 - regulation of exocytosis [Evidence IDA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : RAB3B, member RAS oncogene family protein_id : NP_076026.1

name	Nrd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31559918 CCDS:CCDS18460.1 GeneID:230598 MGI:1201386
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0016919 - nardilysin activity [Evidence IEA] [Evidence ISS]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006869 - lipid transport [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]; GO:0008202 - steroid metabolism [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : nardilysin, N-arginine dibasic convertase, NRD convertase 1 protein_id : NP_666262.2

name	Osbpl9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19527100 GeneID:100273 MGI:1923784
definition	codon_start : 1 note : isoform a is encoded by transcript variant a product : oxysterol binding protein-like 9 isoform a protein_id : NP_598646.1

name	Osbpl9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27597100 GeneID:100273 MGI:1923784
definition	codon_start : 1 note : isoform b is encoded by transcript variant 2 product : oxysterol binding protein-like 9 isoform b protein_id : NP_775485.1

name	Calr4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84370292 CCDS:CCDS18461.1 GeneID:108802 MGI:2140435
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005783 - endoplasmic reticulum [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0005529 - sugar binding [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006457 - protein folding [Evidence IEA] codon_start : 1 product : calreticulin 4 protein_id : NP_001028398.1

name	Eps15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679671 CCDS:CCDS18462.1 GeneID:13858 MGI:104583
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 note : epidermal growth factor pathway substrate 15 product : epidermal growth factor receptor pathway substrate 15 protein_id : NP_031969.1

name	4922503N01Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23510251 CCDS:CCDS18463.1 GeneID:230603 MGI:2444350
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC230603 protein_id : NP_700441.1

name	Rnf11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305435 CCDS:CCDS18464.1 GeneID:29864 MGI:1352759
definition	GO_component : GO:0000151 - ubiquitin ligase complex [Evidence IPI] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IPI] codon_start : 1 product : ring finger protein 11 protein_id : NP_038904.1

name	4930522H14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312856 CCDS:CCDS18465.1 GeneID:67646 MGI:1914896
definition	codon_start : 1 product : hypothetical protein LOC67646 protein_id : NP_080567.1

name	Cdkn2c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680910 CCDS:CCDS18467.1 GeneID:12580 MGI:105388
definition	GO_function : GO:0004861 - cyclin-dependent protein kinase inhibitor activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA] codon_start : 1 product : cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) protein_id : NP_031697.1

name	LOC100040307 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252845 GeneID:100040307
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475262.1

name	Faf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40789280 CCDS:CCDS18468.1 GeneID:14084 MGI:109419
definition	GO_component : GO:0031265 - CD95 death-inducing signaling complex [Evidence ISS]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0005829 - cytosol [Evidence ISS]; GO:0005635 - nuclear envelope [Evidence IDA]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA]; GO:0048471 - perinuclear region [Evidence ISS] GO_function : GO:0031072 - heat shock protein binding [Evidence ISS]; GO:0030191 - Hsp70/Hsc70 protein inhibitor activity [Evidence ISS]; GO:0051059 - NF-kappaB binding [Evidence ISS]; GO:0019901 - protein kinase binding [Evidence ISS]; GO:0008605 - protein kinase CK2 regulator activity [Evidence ISS] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0008219 - cell death [Evidence ISS]; GO:0007253 - cytoplasmic sequestering of NF-kappaB [Evidence ISS]; GO:0043065 - positive regulation of apoptosis [Evidence ISS]; GO:0031334 - positive regulation of protein complex assembly [Evidence ISS]; GO:0043161 - proteasomal ubiquitin-dependent protein catabolism [Evidence ISS]; GO:0030155 - regulation of cell adhesion [Evidence IMP]; GO:0042176 - regulation of protein catabolism [Evidence ISS] codon_start : 1 product : Fas-associated factor 1 protein_id : NP_032009.2

name	Dmrta2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:112821685 CCDS:CCDS18469.1 GeneID:242620 MGI:2653629
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007548 - sex differentiation [Evidence IEA] codon_start : 1 note : doublesex- and mab-3-related transcription factor 5 product : doublesex and mab-3 related transcription factor like family A2 protein_id : NP_758500.2

name	Elavl4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84662764 CCDS:CCDS18470.1 GeneID:15572 MGI:107427
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2; HU-antigen D; RNA-binding protein HUD3 product : ELAV-like 4 isoform b protein_id : NP_001033787.1

name	Elavl4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84662766 CCDS:CCDS18471.1 GeneID:15572 MGI:107427
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1; HU-antigen D; RNA-binding protein HUD3 product : ELAV-like 4 isoform a protein_id : NP_034618.2

name	LOC100040252 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040252
definition	number : 3 pseudo : _no_value

name	LOC100040252 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040252
definition	number : 2 pseudo : _no_value

name	LOC100040252 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040252
definition	number : 1 pseudo : _no_value

name	LOC665728 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665728
definition	number : 1 pseudo : _no_value

name	LOC100040110 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040110
definition	number : 1 pseudo : _no_value

name	LOC100040326 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040326
definition	number : 1 pseudo : _no_value

name	LOC100040326 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040326
definition	number : 2 pseudo : _no_value

name	LOC666144 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149252843 GeneID:666144
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 327 ESTs, 2 Proteins product : similar to orf pseudo : _no_value transcript_id : XR_032061.1

clone name	MSMg01-374O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289O02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-136O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383N08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-144C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453J10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-272H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-193P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-193P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-210N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079K06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-076B09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-519G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168F05
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-238M05.b	B6Ng01-238M05.g
ACC	GA049372	GA049373
length	1,031	1,135
definition	B6Ng01-238M05.b	B6Ng01-238M05.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(108,896,730 - 108,897,758)	(108,804,196 - 108,805,352)
sequence	gaattccagtttctttcccccagatttttatatccccacaatggtggctg ctgtggtaattagctttccctccatatctgtctgtgttgtcagtctgatg atcctcccattttctctgtcaacactcctgcctacagtaatgtgccagtc cctgggaaagttctgggtttctacatgctcatgttgttccaacggtcact ggtattattgtccgcagccacaggacacttggcggccttccacagtgacc accgaatgctttatgaagaaacaagacctgggcttgacaagatcctctgc taccatgcattgtggaactttggggaagtgaccttacctctctgggactc agtttccccatctctacaaagaaggtgccttctaagggctccacaccctc tcagttctgtgatgttctgtggcctggagtactctaaaggaaagtagaaa gcaaggacctgtatctgtatctgcctcacggaggcttttggattagatga cctttccagacccttttgcttttgacatcaaaagtatgtaagatgtcctt tcttgaaaactgccaagctggaaggcctctggcttacttggcccatgggg gtagaggcagtggaggacagccaaagtggtacaagaaaaatgagttttga aattctgtggtcctggattcaaattctacacttgccacttcagtagccac ccacatggcctctttggcttctgtgggctttaaatgaagaactactttgc agaggtgaactgaggctcggcagcatcgtgcctagggaacaccatgctta gtcaccattactcaaggtatcaggtgcagctgagctagagcagactgggg tggaatgcaggaaattgggcatttgtttatttttttctcccctttggtga ggttttgggttttctttcttactttagttcttctgtagccctagtttgac cttgaacttgctaagtagctgagactagctttgaactcctgatcttcttc ctcctacctacttcagtggaagggattacag	gaattcagtcagagaggtcaatgttaatgaacaaatgctaagccactgca ctgggctacaaaccagacattccagctcctgagtgagcttcaccacaccc actgccgctgagaagacactcctgcccaaaggaacactcactgcatattt ctaaatgttctgtcctctctattcactaagtttaaaaaatacaaagaact tccatattatatctgtccttaaaataccaaagctatcaaaatctaaaaca tctcaaacgtatctcttccttcccgctgtccccaaaacatgtaagctctc ttcttactaaactctaattctgatcctaacactggatcgaagttggtacc tgaacataaggagttacctaggaacggaagttccgtatacttttatgaga gcagaggcacagcactcaggaaatagaggcaggaggatctgagttcaagg ccaacacaacaagatgctgctatcaccagtgtgccaacaatacttgtgaa ttgtgtaatggctaagcacaggaaggtccttgggcttggaggatgggggc ttgccttcatctgctctaccaaagaggccagttctgagccaagctgtgaa aaagggcaaacggcattgggtgtggggaaagaacatcattcagaagaatg tggaggccaggaagctttaaagtgtgttaagggaagtcagcacactccat gggtttgcaggggtcctacagcagaggctccaaggctgaacaaacaccag acacttgaatgtcgctttagccaggcaagtcagaaatcctgtctgtcaca ttcaacacaattaaatctaaaacagctaccttctaaattggaccacaagc ctgtccaagtatgcattattatttatggaactgcctaaactaaaaagaaa ctggtaacatcatgaaattgcttttaaaaaccatacggcagagtatctac aaccccttcaactccatattcatgtctccgtcccttaataccacatcatc aacgctgctttctaagcctctgctgactctcagccaggtagtagtaggac tgagtgaccttacagtcagacatttctggtgtaagacagataaaagaggg gagtccaaagcacctgtttctacattccagcctaa
quality values	Open. Hide. 58 26 17 26 58 58 25 12 58 58 58 58 58 58 58 62 62 62 62 62 45 26 62 47 47 62 62 62 54 62 62 62 54 62 62 62 47 31 47 43 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 59 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 59 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 59 59 62 59 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 54 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 47 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 35 58 58 58 58 58 58 58 58 58 42 54 54 52 58 58 58 58 41 58 58 58 58 58 54 49 54 54 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 52 54 54 54 40 58 58 58 58 54 54 54 58 54 52 58 54 58 52 58 51 54 58 58 58 58 54 54 49 47 58 58 58 58 54 54 58 52 45 35 58 52 58 58 54 58 58 47 28 51 33 58 51 53 53 45 45 50 58 41 40 53 58 58 49 58 50 58 50 50 50 54 58 58 58 54 50 53 51 54 35 58 40 51 50 52 58 49 49 27 54 42 21 51 52 58 51 32 51 43 50 52 58 58 40 49 50 40 58 50 49 58 58 58 49 40 50 58 31 51 58 58 58 47 54 58 50 46 50 50 51 54 46 54 53 32 50 50 50 43 58 35 32 46 45 53 58 50 41 58 47 42 42 50 34 53 53 54 51 50 40 40 49 58 50 42 34 39 50 53 36 54 51 32 39 49 54 41 53 42 52 50 54 49 54 47 42 29 54 37 49 40 35 32 39 39 37 51 39 49 54 40 39 52 54 45 37 54 46 37 34 29 28 16 38 27 30 42 39 41 42 54 50 40 41 34 26 51 13 51 35 30 53 33 27 42 52 46 12 51 28 53 40 53 38 32 39 32 46 26 40 37 31 38 47 29 44 32 31 23 54 52 53 40 32 31 32 37 32 26 31 29 24 34 45 29 31 39 34 33 23 29 45 40 31 32 41 40 35 34 32 44 26 31 29 35 32 6 32 30 45 31 31 32 42 43 31 51 14 42 31 35 30 46 18 31 31 10 42 23 36 31 51 46 27 28 33 30 27 32 31 37 31 26 25 30 42 48 31 31 33 32 47 31 32 34 38 48 37 42 33 48 31 30 26 48 48 46 46 46 31 43 32 43 48 46 31 17 46 29 24 31 21 24 28 30 24 27 46 46 29 18 46 18 37 46 46 46 23 18 46 31 30 21 25 32 27 31 47 27 6 8 5 21 31 19 26 31 23 32 24 34 22 30 44 21 28 36 21 33 44 31 25 32 30 11 18 22 27 30 22 30 18 17 21 22 32 24 30 25 31 18 9 33 34 22 37 13 30 27 32 26 15 29 32 48 33 21 32 21 9 6 5 28 18 28 33 22 31 22 13 9 4 5 34 14 7 4 5 6 7 8 22 21 27 19 9 11 8 8 5 5 6 15 29 15 13 30 13 7 9 6 9 14 15 6	Open. Hide. 62 47 22 38 62 47 41 62 62 54 33 34 50 18 18 21 30 32 37 27 36 44 62 62 47 62 62 49 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 59 62 59 59 62 62 62 59 62 62 62 59 56 59 50 38 43 38 54 59 59 59 62 62 62 62 62 59 59 62 62 59 62 62 62 59 59 59 59 62 62 62 62 62 54 62 62 59 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 59 59 59 59 59 62 59 59 59 62 59 62 62 62 62 62 62 62 59 62 62 62 62 54 54 62 62 62 59 62 62 62 62 62 62 62 62 62 62 54 54 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 59 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 56 62 62 62 62 62 62 62 56 62 62 62 62 62 62 54 62 62 54 62 62 62 62 54 42 62 47 42 62 62 62 62 62 62 62 62 49 62 62 62 62 62 52 58 58 58 58 58 58 58 58 58 54 58 47 58 58 58 58 58 58 54 58 58 52 54 58 52 58 58 58 58 58 58 54 43 58 58 54 58 58 58 58 58 58 58 58 58 58 58 52 58 58 49 58 54 54 58 52 58 58 49 58 54 58 54 58 51 51 51 47 58 58 58 43 58 50 51 54 58 58 58 58 58 54 58 49 58 50 45 25 58 46 27 58 58 58 58 58 51 58 46 58 49 58 48 58 51 50 51 52 54 58 52 58 51 51 37 38 37 37 58 58 43 58 25 49 39 49 50 50 58 58 53 58 58 46 18 51 39 39 51 52 58 58 58 52 53 58 58 58 58 52 39 58 44 37 42 58 51 41 58 58 37 31 54 58 39 58 49 51 58 52 49 54 54 47 53 54 51 35 36 35 40 39 53 45 39 51 50 37 35 15 54 51 31 54 31 37 39 31 51 51 49 35 49 39 51 39 37 54 54 47 31 41 45 54 39 32 54 54 53 45 53 30 46 40 42 37 19 12 54 54 32 33 32 32 38 33 33 53 37 45 40 51 46 33 46 32 32 34 46 47 40 53 51 32 32 33 40 52 51 46 31 43 53 35 31 52 39 31 52 45 36 46 8 38 24 33 27 53 31 32 28 36 24 45 36 42 30 30 30 51 31 31 29 31 31 31 24 31 24 31 31 23 46 29 35 23 29 31 31 31 31 31 41 51 38 31 25 41 30 29 31 21 26 33 31 31 33 31 26 20 46 48 30 31 29 36 31 42 31 38 29 41 28 29 24 28 29 31 31 31 21 33 32 25 28 7 25 25 18 15 47 31 36 34 23 11 48 48 39 19 24 32 31 27 19 26 32 33 38 30 24 29 47 24 18 27 36 19 31 18 34 26 31 21 22 31 38 33 31 41 36 21 18 19 25 27 34 21 24 31 27 23 32 31 33 29 27 33 31 48 32 31 19 24 21 26 28 27 29 31 15 23 34 28 44 29 32 32 33 44 44 48 28 16 36 48 24 10 27 27 33 14 19 17 21 34 14 15 19 32 30 26 48 24 24 23 32 32 32 43 43 31 31 48 40 43 10 21 21 22 30 19 17 10 25 15 32 9 17 6 23 31 10 18 7 12 22 17 24 15 28 30 11 15 11 11 13 26 17 17 13 23 16 8 7 5 13 10 6 16 5 5 17 27 9 24 19 13 13 40 15 14 12 15 5 9 27 13 7 8 10 7 28 21 21 21 20 5 24 8 16 28 24 17 12 24 40 10 18 24 17 21 20 15 13 19 24 20 21 7 9 7 22 10 7 4 7 11 21 10 16 6 11 8 10 20 21 6 11 23 9 19 23 3 6 11 12 4 7 11 13 4 7 18 17 19 6 8 8 7 2 4 6 6 16 12 22 7 14 11 6 7 12 10 25 19 4 7 12 18 7 6 23 4 3 4 7 3 10 15 8 5 4 9 5 30 5 4 6 3 5 6 14 10 8 14 11 10 12 12 21 12 2 4 2 4 8 4 1 1 2 2 3 5 5 21 7 14 8 4 5 5

Alignment Information

BAC End 1

BAC End 2

seq1: chr4_108896730_108897758
seq2: B6Ng01-238M05.b_43_1073 (reverse)

seq1  CTGTAATCCCTT-CACTG-AGTAGGTA-GAGGAAGGAAGATCAGGAGTTC  47
      |||||||||||| ||||| |||||||| |||||| |||||||||||||||
seq2  CTGTAATCCCTTCCACTGAAGTAGGTAGGAGGAA-GAAGATCAGGAGTTC  49

seq1  AAAGCTAGTCTCAGCTACTTAGCAAGTTCAAGGTCAAACTA-GGCTACAG  96
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AAAGCTAGTCTCAGCTACTTAGCAAGTTCAAGGTCAAACTAGGGCTACAG  99

seq1  AAGAACCTAAAGTAAGAAAAGAAAAACCAAAACCTCACCAAAGGGGAGAA  146
      ||||| |||||||||| |||||||| ||||||||||||||||||||||||
seq2  AAGAA-CTAAAGTAAG-AAAGAAAACCCAAAACCTCACCAAAGGGGAGAA  147

seq1  AAAAATAAACAAATGCCCAATTTCCTGCATTCCA-CCCAGTCTGCTCTAG  195
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AAAAATAAACAAATGCCCAATTTCCTGCATTCCACCCCAGTCTGCTCTAG  197

seq1  CTCAGCTGCACCTGATACCTTGAGTAATGGTGACTAAGCATGGTGTTCCC  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCTGCACCTGATACCTTGAGTAATGGTGACTAAGCATGGTGTTCCC  247

seq1  TAGGCACGATGCTGCCGAGCCTCAGTTCACCTCTGCAAAGTAGTTCTTCA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCACGATGCTGCCGAGCCTCAGTTCACCTCTGCAAAGTAGTTCTTCA  297

seq1  TTTAAAGCCCACAGAAGCCAAAGAGGCCATGTGGGTGGCTACTGAAGTGG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGCCCACAGAAGCCAAAGAGGCCATGTGGGTGGCTACTGAAGTGG  347

seq1  CAAGTGTAGAATTTGAATCCAGGACCACAGAATTTCAAAACTCATTTTTC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGTAGAATTTGAATCCAGGACCACAGAATTTCAAAACTCATTTTTC  397

seq1  TTGTACCACTTTGGCTGTCCTCCACTGCCTCTACCCCCATGGGCCAAGTA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACCACTTTGGCTGTCCTCCACTGCCTCTACCCCCATGGGCCAAGTA  447

seq1  AGCCAGAGGCCTTCCAGCTTGGCAGTTTTCAAGAAAGGACATCTTACATA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGAGGCCTTCCAGCTTGGCAGTTTTCAAGAAAGGACATCTTACATA  497

seq1  CTTTTGATGTCAAAAGCAAAAGGGTCTGGAAAGGTCATCTAATCCAAAAG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGATGTCAAAAGCAAAAGGGTCTGGAAAGGTCATCTAATCCAAAAG  547

seq1  CCTCCGTGAGGCAGATACAGATACAGGTCCTTGCTTTCTACTTTCCTTTA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCGTGAGGCAGATACAGATACAGGTCCTTGCTTTCTACTTTCCTTTA  597

seq1  GAGTACTCCAGGCCACAGAACATCACAGAACTGAGAGGGTGTGGAGCCCT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTACTCCAGGCCACAGAACATCACAGAACTGAGAGGGTGTGGAGCCCT  647

seq1  TAGAAGGCACCTTCTTTGTAGAGATGGGGAAACTGAGTCCCAGAGAGGTA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGGCACCTTCTTTGTAGAGATGGGGAAACTGAGTCCCAGAGAGGTA  697

seq1  AGGTCACTTCCCCAAAGTTCCACAATGCATGGTAGCAGAGGATCTTGTCA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCACTTCCCCAAAGTTCCACAATGCATGGTAGCAGAGGATCTTGTCA  747

seq1  AGCCCAGGTCTTGTTTCTTCATAAAGCATTCGGTGGTCACTGTGGAAGGC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAGGTCTTGTTTCTTCATAAAGCATTCGGTGGTCACTGTGGAAGGC  797

seq1  CGCCAAGTGTCCTGTGGCTGCGGACAATAATACCAGTGACCGTTGGAACA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCAAGTGTCCTGTGGCTGCGGACAATAATACCAGTGACCGTTGGAACA  847

seq1  ACATGAGCATGTAGAAACCCAGAACTTTCCCAGGGACTGGCACATTACTG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAGCATGTAGAAACCCAGAACTTTCCCAGGGACTGGCACATTACTG  897

seq1  TAGGCAGGAGTGTTGACAGAGAAAATGGGAGGATCATCAGACTGACAACA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCAGGAGTGTTGACAGAGAAAATGGGAGGATCATCAGACTGACAACA  947

seq1  CAGACAGATATGGAGGGAAAGCTAATTACCACAGCAGCCACCATTGTGGG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAGATATGGAGGGAAAGCTAATTACCACAGCAGCCACCATTGTGGG  997

seq1  GATATAAAAATCTGGGGGAAAGAAACTGGAATTC  1029
      ||||||||||||||||||||||||||||||||||
seq2  GATATAAAAATCTGGGGGAAAGAAACTGGAATTC  1031

seq1: chr4_108804196_108805352
seq2: B6Ng01-238M05.g_70_1204

seq1  GAATTCAGTCAGAGAGGTCAATGTTAATGAACAAATGCTAAGCCACTGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCAGAGAGGTCAATGTTAATGAACAAATGCTAAGCCACTGCA  50

seq1  CTGGGCTACAAACCAGACATTCCAGCTCCTGAGTGAGCTTCACCACACCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCTACAAACCAGACATTCCAGCTCCTGAGTGAGCTTCACCACACCC  100

seq1  ACTGCCGCTGAGAAGACACTCCTGCCCAAAGGAACACTCACTGCATATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCGCTGAGAAGACACTCCTGCCCAAAGGAACACTCACTGCATATTT  150

seq1  CTAAATGTTCTGTCCTCTCTATTCACTAAGTTTAAAAAATACAAAGAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATGTTCTGTCCTCTCTATTCACTAAGTTTAAAAAATACAAAGAACT  200

seq1  TCCATATTATATCTGTCCTTAAAATACCAAAGCTATCAAAATCTAAAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATATTATATCTGTCCTTAAAATACCAAAGCTATCAAAATCTAAAACA  250

seq1  TCTCAAACGTATCTCTTCCTTCCCGCTGTCCCCAAAACATGTAAGCTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAACGTATCTCTTCCTTCCCGCTGTCCCCAAAACATGTAAGCTCTC  300

seq1  TTCTTACTAAACTCTAATTCTGATCCTAACACTGGATCGAAGTTGGTACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTACTAAACTCTAATTCTGATCCTAACACTGGATCGAAGTTGGTACC  350

seq1  TGAACATAAGGAGTTACCTAGGAACGGAAGTTCCGTATACTTTTATGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACATAAGGAGTTACCTAGGAACGGAAGTTCCGTATACTTTTATGAGA  400

seq1  GCAGAGGCACAGCACTCAGGAAATAGAGGCAGGAGGATCTGAGTTCAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGGCACAGCACTCAGGAAATAGAGGCAGGAGGATCTGAGTTCAAGG  450

seq1  CCAACACAACAAGATGCTGCTATCACCAGTGTGCCAACAATACTTGTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACACAACAAGATGCTGCTATCACCAGTGTGCCAACAATACTTGTGAA  500

seq1  TTGTGTAATGGCTAAGCACAGGAAGGTCCTTGGGCTTGGAGGATGGGGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTAATGGCTAAGCACAGGAAGGTCCTTGGGCTTGGAGGATGGGGGC  550

seq1  TTGCCTTCATCTGCTCTACCAAAGAGGCCAGTTCTGAGCCAAGCTGTGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTTCATCTGCTCTACCAAAGAGGCCAGTTCTGAGCCAAGCTGTGAA  600

seq1  AAAGGGCAAACGGCATTGGGTGTGGGGAAAGAACATCATTCAGAAGAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGCAAACGGCATTGGGTGTGGGGAAAGAACATCATTCAGAAGAATG  650

seq1  TGGAGGCCAGGAAGCTTTAAAGTGTGTTAAGGGAAGTCAGCACACTCCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGCCAGGAAGCTTTAAAGTGTGTTAAGGGAAGTCAGCACACTCCAT  700

seq1  GGGTTTGCAGGGGTCCTACAGCAGAGGCTCCAAGGCTGAACAAACACCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTGCAGGGGTCCTACAGCAGAGGCTCCAAGGCTGAACAAACACCAG  750

seq1  ACACTTGAATGTCGCTTTAGCCAGGCAAGTCAGAAATCCTGTCTGTCACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTGAATGTCGCTTTAGCCAGGCAAGTCAGAAATCCTGTCTGTCACA  800

seq1  TTCAACACAATTAAATCTAAAACAGCTACCTTCTAAATTGGACCACAAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACACAATTAAATCTAAAACAGCTACCTTCTAAATTGGACCACAAGC  850

seq1  CTGTCCAAAGTATGCATTATTATTTATGGAACTGCCTAAACTAAAAAGAA  900
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCC-AAGTATGCATTATTATTTATGGAACTGCCTAAACTAAAAAGAA  899

seq1  ACTGGTAACAATCATGAAATTGCTTTTAAAAACCATACGGCAGAGTAATC  950
      ||||||||| |||||||||||||||||||||||||||||||||||| |||
seq2  ACTGGTAAC-ATCATGAAATTGCTTTTAAAAACCATACGGCAGAGT-ATC  947

seq1  TACAAACCCCTTCAACTCCATATTCATTGTCTCCGTCCCTTAATAACCAC  1000
      ||| |||||||||||||||||||||| ||||||||||||||||| |||||
seq2  TAC-AACCCCTTCAACTCCATATTCA-TGTCTCCGTCCCTTAAT-ACCAC  994

seq1  ATCATCAAACGCTGCTTTCTAAGCCTCTGCTTGAACTCTCAG-CAAGTAG  1049
      |||||| ||||||||||||||||||||||||   |||||||| || ||||
seq2  ATCATC-AACGCTGCTTTCTAAGCCTCTGCT--GACTCTCAGCCAGGTAG  1041

seq1  TAGTAAGACCTGAGGTGACCCTTACCAAGTCAAGACAATTTCTGGTGTAA  1099
      ||||| || |||| |||| ||||||  |||| |||| |||||||||||||
seq2  TAGTAGGA-CTGA-GTGA-CCTTAC--AGTC-AGAC-ATTTCTGGTGTAA  1084

seq1  GACAGAATTAAAAAAGAGGGAGTCACAAAGCACCTGGTTTTCTACAATTC  1149
      ||||||  ||||| || ||||||| |||||||||||  ||||||| ||||
seq2  GACAGA--TAAAAGAG-GGGAGTC-CAAAGCACCTG--TTTCTAC-ATTC  1127

seq1  AAGCCTAA  1157
       |||||||
seq2  CAGCCTAA  1135

BAC Information

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BAC

BAC End Information

Alignment Information