BAC Information

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BAC

Clone NameB6Ng01-242L21
Chromosome4 (Build37)
Map Location 29,329,008 - 29,330,194
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665141, LOC100040773, Epha7, LOC100040907, LOC100040811
Downstream geneLOC665185
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-242L21.bB6Ng01-242L21.g
ACCGA052307GA052308
length1,1851,142
definitionB6Ng01-242L21.b B6Ng01-242L21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactgtaggcatttctaatcaagaaaggccttaagacctctactg
cttgtattataggctgttgagtttgcatgctctgcttgtgttttctatac
catagtgcagttcttctatcatatacataagcagctctttaagttcatgt
ggtaaaacccacaataattggagtagcaaatattgtgcagagaggaattc
ataatgtgtttacaagcaagactgggcactctatttttaattgaccacca
agttaaagcatatccatagcaactgcctggataagtttcagatctattga
gtttaggaagacacacacacagattctgcgtttcacaacatttccttatt
ttccattcctgtgattcttattgatcttgatattcttaaggcacaaagtc
tgttagtgttaaaatgtaaatccctttccagaagccactctgactgaagg
cttgctttactctcagaaaagaaaagactgccgacttgaagccaaggata
tgacagttgtggaaaaggcagcctggaaatgacatggatttggctgtgtt
tcatcctcataaatgtatctcttcctaaatatggtgggctgacaatgtgg
acaaaccgctctgtgggaagtggtggtccattgctttggccttctgggag
acaatggcagtggggacagctggcaagaaacaactgaaaacagtggatct
ttatgggcaaaggcactgaccatgattcaaaaaggcagggaagcagacag
tgccagattctgtagctccatggctgatgttgtcccatgtgctacatgta
atgggtcagtggttagctcagtaaagcaccagcatacctgggaccaactc
ttatagacagagaaatgttgctaattatttttcaaggacttagcctagaa
ttagctttgggtatgtctgagatgtaacactggcacatcagtactagaaa
ccaagttagacttcactcataaatatttccccccttttttttcaaatgca
tgtaaccaagcaatgctgtaaacactcaaagatctctttacacaatgtgt
acttgtgactcacttacgtagaatggagagaattgtttcatcagcagaaa
ctataaatataaattggagtacaatatttgttccaacaatttcaaattgc
acggacttcgacaagtcagcctgtcaaggcaggga
gaattcttcctgtctattaggaactgcagggtcaaaaatggagaagaaac
agagtgaaaggaagtccagtgactggcctagtctgggatccatctcaaga
ggagcctccaaggcctgacactattactgatgctatggtgtgcttacaga
taggaaactagcatggctgtcctccaagaggcccaacgagcagctgacta
agaccgaagcagacacttacacccaaccaatggactgaagtcagggagcc
ctgtgcttgaattagaaaaaagctggaagaagaccctgtgtttgaattca
ggaaagtatctcaggaggggggcaaccccatagaaacaccagcaatctca
ataacccagatcctagagatttctcagacactgagccatcaaccagacag
cacaccctggctggtatgagacccaggacacatacacagcagaggactgc
ctggtctgggctcaagagagaagatgagcctaactctcaggagactttaa
gccccagggaatgggaggtctagtggggggtggtggaacatcctcttgga
aacagggggaggagaaatgtgataaggaactgtgagaggaaggaccagga
gggagataatgactggactataaaaaaaaaaaaaaggaaagagcgaaaga
aagaaaagtaatttaagagaaagggacacagagagacagagagacagaga
gatagagagacagagagacagagagatagagagacagagagacagagaga
tagagagagagataaaatactgcaagacaactatccaagacagaaatgaa
caactcaaaattgcccaggacgtcccagaaacttgttagtttcattagac
ctccatcctgatcaagtgtaaagaattaagacttataatagtcaccctca
gactaggcatgatcatacagacagtcatgacaagccagaaaatagtcaaa
acaagtagagaacagaataattgcattaaaaaaacacaaaggaaaaaact
caaagactgataccaagctgtttgaaatggctcaagtaattggacacttg
aaaagatcacaactatggacgagcagctgaacctggttgttcattaggaa
gctgacatagctgagaaggccaagtggtggggtcacccttaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_29329008_29330194
seq2: B6Ng01-242L21.b_42_1226

seq1  GAATTCACTGTAGGCATTTCTAATCAAGAAAGGCCTTAAGACCTCTACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGTAGGCATTTCTAATCAAGAAAGGCCTTAAGACCTCTACTG  50

seq1  CTTGTATTATAGGCTGTTGAGTTTGCATGCTCTGCTTGTGTTTTCTATAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTATTATAGGCTGTTGAGTTTGCATGCTCTGCTTGTGTTTTCTATAC  100

seq1  CATAGTGCAGTTCTTCTATCATATACATAAGCAGCTCTTTAAGTTCATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTGCAGTTCTTCTATCATATACATAAGCAGCTCTTTAAGTTCATGT  150

seq1  GGTAAAACCCACAATAATTGGAGTAGCAAATATTGTGCAGAGAGGAATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAACCCACAATAATTGGAGTAGCAAATATTGTGCAGAGAGGAATTC  200

seq1  ATAATGTGTTTACAAGCAAGACTGGGCACTCTATTTTTAATTGACCACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGTGTTTACAAGCAAGACTGGGCACTCTATTTTTAATTGACCACCA  250

seq1  AGTTAAAGCATATCCATAGCAACTGCCTGGATAAGTTTCAGATCTATTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAAGCATATCCATAGCAACTGCCTGGATAAGTTTCAGATCTATTGA  300

seq1  GTTTAGGAAGACACACACACAGATTCTGCGTTTCACAACATTTCCTTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGGAAGACACACACACAGATTCTGCGTTTCACAACATTTCCTTATT  350

seq1  TTCCATTCCTGTGATTCTTATTGATCTTGATATTCTTAAGGCACAAAGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTCCTGTGATTCTTATTGATCTTGATATTCTTAAGGCACAAAGTC  400

seq1  TGTTAGTGTTAAAATGTAAATCCCTTTCCAGAAGCCACTCTGACTGAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGTGTTAAAATGTAAATCCCTTTCCAGAAGCCACTCTGACTGAAGG  450

seq1  CTTGCTTTACTCTCAGAAAAGAAAAGACTGCCGACTTGAAGCCAAGGATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTTTACTCTCAGAAAAGAAAAGACTGCCGACTTGAAGCCAAGGATA  500

seq1  TGACAGTTGTGGAAAAGGCAGCCTGGAAATGACATGGATTTGGCTGTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGTTGTGGAAAAGGCAGCCTGGAAATGACATGGATTTGGCTGTGTT  550

seq1  TCATCCTCATAAATGTATCTCTTCCTAAATATGGTGGGCTGACAATGTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCTCATAAATGTATCTCTTCCTAAATATGGTGGGCTGACAATGTGG  600

seq1  ACAAACCGCTCTGTGGGAAGTGGTGGTCCATTGCTTTGGCCTTCTGGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACCGCTCTGTGGGAAGTGGTGGTCCATTGCTTTGGCCTTCTGGGAG  650

seq1  ACAATGGCAGTGGGGACAGCTGGCAAGAAACAACTGAAAACAGTGGATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGGCAGTGGGGACAGCTGGCAAGAAACAACTGAAAACAGTGGATCT  700

seq1  TTATGGGCAAAGGCACTGACCATGATTCAAAAAGGCAGGGAAGCAGACAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGGCAAAGGCACTGACCATGATTCAAAAAGGCAGGGAAGCAGACAG  750

seq1  TGCCAGATTCTGTAGCTCCATGGCTGATGTTGTCCCATGTGCTACATGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGATTCTGTAGCTCCATGGCTGATGTTGTCCCATGTGCTACATGTA  800

seq1  ATGGGTCAGTGGTTAGCTCAGTAAAGCACCAGCATACCTGGGACCAACTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTCAGTGGTTAGCTCAGTAAAGCACCAGCATACCTGGGACCAACTC  850

seq1  TTATAGACAGAGAAATGTTGCTAATTATTTTTCAGGGACTTAGCCTAGAA  900
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTATAGACAGAGAAATGTTGCTAATTATTTTTCAAGGACTTAGCCTAGAA  900

seq1  TTAGCTTT-GGTATGTCTGAGATGTAACACTGGCACATCAGTACTAG-AA  948
      |||||||| |||||||||||||||||||||||||||||||||||||| ||
seq2  TTAGCTTTGGGTATGTCTGAGATGTAACACTGGCACATCAGTACTAGAAA  950

seq1  CCAAGTTAGACTTCACTCATAAATATTT-CCCCCTTTTTTTTCAAATGCA  997
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CCAAGTTAGACTTCACTCATAAATATTTCCCCCCTTTTTTTTCAAATGCA  1000

seq1  TGTTAACCAAGCAATGCTGTAAACACTCAAAGATCTCTTTACACAATGTG  1047
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TG-TAACCAAGCAATGCTGTAAACACTCAAAGATCTCTTTACACAATGTG  1049

seq1  TACTTGTGACTCACTTTAACGTAGAATTGAGAGAA-TGTTTCATTCAGCA  1096
      ||||||||||||||||  ||||||||| ||||||| ||||||| ||||||
seq2  TACTTGTGACTCACTT--ACGTAGAATGGAGAGAATTGTTTCA-TCAGCA  1096

seq1  GAAACTATAAATATTAATT-GAGTACATATTTTGTTTCAAACAATTCAAT  1145
      |||||||||||||| |||| ||||||| || ||  ||| |||||||  | 
seq2  GAAACTATAAATATAAATTGGAGTACA-ATATTTGTTCCAACAATTTCAA  1145

seq1  ATTGCCACGGCACTCCGGCCAAGTCAGCCTGTC-AGGCAGGGA  1187
      |||| ||||| ||| | | |||||||||||||| |||||||||
seq2  ATTG-CACGG-ACTTC-GACAAGTCAGCCTGTCAAGGCAGGGA  1185