BAC Information

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BAC

Clone NameB6Ng01-242N07
Chromosome4 (Build37)
Map Location 69,976,828 - 69,978,015
singlet/doubletsinglet
Overlap geneCdk5rap2
Upstream geneLOC622491, LOC433716, LOC100039888, LOC242497, LOC671064
Downstream geneMegf9, LOC100039565
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-242N07.bB6Ng01-242N07.g
ACCGA052371GA052372
length1,1811,196
definitionB6Ng01-242N07.b B6Ng01-242N07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgagattctatccaggtaactgtgggggattaaatccacgtat
ttagcagtgcctcctactactgaaaccccattaaaacaagagttggggag
tagggatgtgtaagcccacggtgccaagtaggagcagtgtgcagcagaag
ctgtaagttatcaaaattttgcgtactgcacaggatttagttttgctact
atggcacatagtaaagaacagccaataagaattgaactaaaataggtttc
atcccaaaaatggctcagcagatataagatgtggccagtacctttgaaaa
caaatgatttaactacgattctgggcaggtataggtgaccctctctttgt
ctccagcaagagatttctgagggattgaaagccaagaagtgctgtcctgg
gcatcgttggaggcagctaaaagcagaagtggcagttgaagggaaagaag
tgagtggagtgtgcagaccccaaccaggagaatcctcctagagggaagta
gaatgaaggatgccagccaatgaaagttcttcaatcgaacagttggtttt
cacttgcacatctctgcaggcccatatctgcgtctcccccagtggtagtt
gggtcctttgtgcactgggctggactggaggaagagaagcttagccaggt
ggcttcaggtcagcgatgagtgcgtgaacaaagaacacacacacacacac
acacacacacacacacacaccccagttcttcagaaaactggttcagttta
tttgggggcagaaaaggctctttaaatattttggggggtgagtagagtct
tttgggatgagtttacatcattggccagaaccaagatgttggggatgccc
atttgcatgaggaggagttccagatgcttctggacatgtcgttatgaggg
gaaaggaagttttcacccaactactggcaacataacgtcctctggtgagg
caaggggcgggggagcacagggcttgtacaccatgcatgcagaccggggc
agtggggggagcaatcctattcctgccatctcaggaacaagatttcctag
tttgggacatgcctcaacacactcttgctcagggctggctcttggtgcca
tggctctctggccacacatctccctgtaaggactactaaatgcaattctc
tactgtcactatgttaaacggctgggaaatg

gaattcctgatctttccaagacttttatcatgaatgagtgttggatcttg
tcgaatgctttttccgcatctaatgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacgttgatggatttccgtatattaaacc
atccctgcatccctggaatgaaacctacttggtcagtatggatgattgct
ttaatgtgttcttggattcggttggcgagaattttattgaggatttttgc
atctttattcataagggaaattggtctgaagttgtctatctttgttggat
ctttctgtggtttaggtatcagagtaactgtggcttcatagaatgagttg
ggtagagttccttctacttctatattgtggaatagtttgtgcagaactgg
aattagatcgtctttgaaggtctggtagaactctgcactaaacccatctc
gtcctgggctttttttggctgggagattattaatgactgcttctatttct
ttaggggatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcatccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaac
taggatgctgtccctgtgccctctagtgagtctagctaagtgtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattgtttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
ttcctgccgtctactcctctttgggtgaatttgcttcctttttttctaga
gcttttagatgtgttgacaagcctgctagtatgtgctctctcccgtttct
tcttggagccactcatagctatgagtttccctcttagaaatgctttcatt
gtgtccataggtttgggtacattgtggcttcattttcatgaactctaaaa
gtcttttatttcttttcttaattcccttcttgaacaagtatatcattgga
caaggagtggtgtttagtttccacggcacgtttgcttaccataattaagt
atgttattgcagaatcataccctctagggacaatgtggtgggtctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_69976828_69978015
seq2: B6Ng01-242N07.b_47_1227 (reverse)

seq1  CATTTCCCAGCCAGTTAACATGATGGGCAAGTAGAGGAATTACATATTTA  50
      ||||||||||||  |||||||   | |  |||||| ||||| ||   || 
seq2  CATTTCCCAGCCGTTTAACAT--AGTGACAGTAGA-GAATTGCA---TTT  44

seq1  AGTAGT-CTTACAGGGAGATGTGTGGGGCCAAGAGAGCCATGGCACCAGG  99
      |||||| |||||||||||||||||||   | ||||||||||||||||| |
seq2  AGTAGTCCTTACAGGGAGATGTGTGG---CCAGAGAGCCATGGCACCAAG  91

seq1  AGCAGCCCCTGAGCAAGAGTGTGTTGAGGCATGTCCAAACCTAGGAAATC  149
      |||   |||||||||||||||||||||||||||||| || ||||||||||
seq2  AGCCAGCCCTGAGCAAGAGTGTGTTGAGGCATGTCCCAAACTAGGAAATC  141

seq1  TTG-TCCTGAGATGGGCAGGAATAGGATGGCT-CCCCCACTGCCCCGGGT  197
      ||| ||||||||| |||||||||||||| ||| ||||||||||||| |||
seq2  TTGTTCCTGAGAT-GGCAGGAATAGGATTGCTCCCCCCACTGCCCC-GGT  189

seq1  CTGCATGCCATGGTGTACAAGCCCTGTGCT-CCCCGCCCCTTGCCTCACC  246
      ||||||| |||||||||||||||||||||| |||||||||||||||||||
seq2  CTGCATG-CATGGTGTACAAGCCCTGTGCTCCCCCGCCCCTTGCCTCACC  238

seq1  AGAGGACGTTATGTTGCCAGTAGTTGGGTG-AAACTTCCTTTCCCCTCAT  295
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AGAGGACGTTATGTTGCCAGTAGTTGGGTGAAAACTTCCTTTCCCCTCAT  288

seq1  AACGACATGTCCAGAAGCATCTGGAACTCCTCCTCATGCAAATGGGCATC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGACATGTCCAGAAGCATCTGGAACTCCTCCTCATGCAAATGGGCATC  338

seq1  CCCAACATCTTGGTTCTGGCCAATGATGTAAACTCATCCCAAAAGACTCT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACATCTTGGTTCTGGCCAATGATGTAAACTCATCCCAAAAGACTCT  388

seq1  ACTCACCCCCCAAAATATTTAAAGAGCCTTTTCTGCCCCCAAATAAACTG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACCCCCCAAAATATTTAAAGAGCCTTTTCTGCCCCCAAATAAACTG  438

seq1  AACCAGTTTTCTGAAGAACTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGTTTTCTGAAGAACTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTG  488

seq1  TGTGTGTGTTCTTTGTTCACGCACTCATCGCTGACCTGAAGCCACCTGGC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTTCTTTGTTCACGCACTCATCGCTGACCTGAAGCCACCTGGC  538

seq1  TAAGCTTCTCTTCCTCCAGTCCAGCCCAGTGCACAAAGGACCCAACTACC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTTCTCTTCCTCCAGTCCAGCCCAGTGCACAAAGGACCCAACTACC  588

seq1  ACTGGGGGAGACGCAGATATGGGCCTGCAGAGATGTGCAAGTGAAAACCA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGGGAGACGCAGATATGGGCCTGCAGAGATGTGCAAGTGAAAACCA  638

seq1  ACTGTTCGATTGAAGAACTTTCATTGGCTGGCATCCTTCATTCTACTTCC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTCGATTGAAGAACTTTCATTGGCTGGCATCCTTCATTCTACTTCC  688

seq1  CTCTAGGAGGATTCTCCTGGTTGGGGTCTGCACACTCCACTCACTTCTTT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGGAGGATTCTCCTGGTTGGGGTCTGCACACTCCACTCACTTCTTT  738

seq1  CCCTTCAACTGCCACTTCTGCTTTTAGCTGCCTCCAACGATGCCCAGGAC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCAACTGCCACTTCTGCTTTTAGCTGCCTCCAACGATGCCCAGGAC  788

seq1  AGCACTTCTTGGCTTTCAATCCCTCAGAAATCTCTTGCTGGAGACAAAGA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTTCTTGGCTTTCAATCCCTCAGAAATCTCTTGCTGGAGACAAAGA  838

seq1  GAGGGTCACCTATACCTGCCCAGAATCGTAGTTAAATCATTTGTTTTCAA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTCACCTATACCTGCCCAGAATCGTAGTTAAATCATTTGTTTTCAA  888

seq1  AGGTACTGGCCACATCTTATATCTGCTGAGCCATTTTTGGGATGAAACCT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACTGGCCACATCTTATATCTGCTGAGCCATTTTTGGGATGAAACCT  938

seq1  ATTTTAGTTCAATTCTTATTGGCTGTTCTTTACTATGTGCCATAGTAGCA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAGTTCAATTCTTATTGGCTGTTCTTTACTATGTGCCATAGTAGCA  988

seq1  AAACTAAATCCTGTGCAGTACGCAAAATTTTGATAACTTACAGCTTCTGC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAAATCCTGTGCAGTACGCAAAATTTTGATAACTTACAGCTTCTGC  1038

seq1  TGCACACTGCTCCTACTTGGCACCGTGGGCTTACACATCCCTACTCCCCA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACACTGCTCCTACTTGGCACCGTGGGCTTACACATCCCTACTCCCCA  1088

seq1  ACTCTTGTTTTAATGGGGTTTCAGTAGTAGGAGGCACTGCTAAATACGTG  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTGTTTTAATGGGGTTTCAGTAGTAGGAGGCACTGCTAAATACGTG  1138

seq1  GATTTAATCCCCCACAGTTACCTGGATAGAATCTCAGGAATTC  1188
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAATCCCCCACAGTTACCTGGATAGAATCTCAGGAATTC  1181


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