BAC Information

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BAC

Clone NameB6Ng01-243K10
Chromosome4 (Build37)
Map Location 6,125,560 - 6,126,674
singlet/doubletsinglet
Overlap gene3110003A22Rik
Upstream gene1700012H17Rik, LOC669309
Downstream geneCyp7a1, Sdcbp, Nsmaf, LOC100039397, LOC100039414, Tox, LOC100039421, LOC666700
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-243K10.bB6Ng01-243K10.g
ACCGA052976GA052977
length1,1651,108
definitionB6Ng01-243K10.b B6Ng01-243K10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatgacattcttgggcaaatggatgtatctggaggatatcatcct
gagtgaggtatctcaatcacaaaagaacacacatgatatgtactcactga
tatgtggatattagcccagaaacgtagaatacccaagatacattttttaa
aacacatgaaaatcaagatgaaggaagaccaaagtgtggatactttgttc
cttcttagaatggggaacaaaatacccatggaaggagttacagtgacaaa
gttcagagttgagatggaaggaagaccatccagaaactgccccacccagg
tatccatcccatacacaaccaccaaacccagacactattgcatatgccag
caagattttgctgacaggaccctgatatagttatctcttgtgaggctatg
ccagtgcctggcaaatacagaggtggatgctcacagtcatctataggatg
aaacacagggtccctaataaaggagccagagaatgtacccaaggagctaa
aggggtctgcaaccctagaggaggaacaacaatatgaactaactagtacc
caccaacctgtgtctctagttgcatatgtagcagaggttggcttagttgg
ccatcaatgggaggagaggccctaggtctagagaaaaatcatatacccag
tacaggggaatgccagggccaggaagcaggaattggtgggttgtggagca
gggcgggaggatggtataggggactttcagaattcatttgaaatgtaaat
gaagaaaatatctaattacaaaatagaaatgtgtctctctagatgtttag
agtaagctattgacctcatgtcttattcactcagagactcttataaagga
ggatactgtaagaacaaccacatttacaaatccttcaaaattataaaatg
tatactaatttcttatgttccagttaacccttttgttaattttttatcaa
gaccctacagccaacaaatagtttggtggtcaaggaccagagacccttgg
agctagaacatggggcagaagtgggggttcaactaacctcaacttgaatg
agaaaacacatgaactatgcatgtggttatatcttctgtaaccagggggg
aacagcagaagaatggtgttggatttcgttggctcagctatgaatatgcg
aaaataacaagtctc

gaattcaagtctccctaagctgccaagcaagttcaaaccagtttgaactg
ccccaaaaaactaaggtctgtggatgtggctcagtagtagagttttgcct
agcatatgcaagacgctgggttcaatccctagaactctttcttcagatga
atatagtttgttgttggtagttttaatttcataatgcgctttggtttgtt
tgtgtttgggaatgtgatagtttagtatcccacacctatcccatgtcctt
cttactgctggactatacctctgcaaccagtgatgtagttattaaagact
tcttgcctcaagtttgacctcttgcattatttactacacaacaagccgag
tttctttagaagatgtagtgactgttgactcactggagatagtgtgagga
ccattggcagtcctttgtaagcatgatgctgctttccatccactagagca
cttcccactcccttgctctacactcagtaagaacacttgccctgttgtgt
cttcattgtacttcaaacgggtgtctttaattgtcatgtcctcctagggt
agcattagagaccaaaacaattatatattgattgtcatcttgttcttgtg
gttttcagggtatcattgtgtagcctaggcaggcctggaactcactgtca
ctccagctaccctcaaacagtcgatccccctgcttcagcctcccaatgtc
aagatgtccagagtctgctagcaccaccacatgtggtacactggcttttc
aatcccactggtttgatttttatccacttgacacagctagagtcttgtgg
gaagaaggctctcatatgagaggtgacctctatccaatgcctaagggcat
gtctgtggggcattttcttgattaatgagttatgtgggatggtccagccc
actttgggcagtgccgtccctgggcaggtgactgtagaatggtggaaata
ctattgtgcagtaaagtccttgagtgataaagttgctgtcatgacagacc
tgctctaaaaagagatctctcagccccatgtttatatggtgtgtggtgtg
tctgtgtgtgtgtgtgtctttcataacctcccatagctctgttttcttat
tccaaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_6125560_6126674
seq2: B6Ng01-243K10.g_65_1172

seq1  GAATTCAAGTCTCCCTAAGCTGCCAAGCAAGTTCAAACCAGTTTGAACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTCTCCCTAAGCTGCCAAGCAAGTTCAAACCAGTTTGAACTG  50

seq1  CCCCAAAAAACTAAGGTCTGTGGATGTGGCTCAGTAGTAGAGTTTTGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAAAAACTAAGGTCTGTGGATGTGGCTCAGTAGTAGAGTTTTGCCT  100

seq1  AGCATATGCAAGACGCTGGGTTCAATCCCTAGAACTCTTTCTTCAGATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATATGCAAGACGCTGGGTTCAATCCCTAGAACTCTTTCTTCAGATGA  150

seq1  ATATAGTTTGTTGTTGGTAGTTTTAATTTCATAATGCGCTTTGGTTTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGTTTGTTGTTGGTAGTTTTAATTTCATAATGCGCTTTGGTTTGTT  200

seq1  TGTGTTTGGGAATGTGATAGTTTAGTATCCCACACCTATCCCATGTCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTGGGAATGTGATAGTTTAGTATCCCACACCTATCCCATGTCCTT  250

seq1  CTTACTGCTGGACTATACCTCTGCAACCAGTGATGTAGTTATTAAAGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTGCTGGACTATACCTCTGCAACCAGTGATGTAGTTATTAAAGACT  300

seq1  TCTTGCCTCAAGTTTGACCTCTTGCATTATTTACTACACAACAAGCCGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCCTCAAGTTTGACCTCTTGCATTATTTACTACACAACAAGCCGAG  350

seq1  TTTCTTTAGAAGATGTAGTGACTGTTGACTCACTGGAGATAGTGTGAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTAGAAGATGTAGTGACTGTTGACTCACTGGAGATAGTGTGAGGA  400

seq1  CCATTGGCAGTCCTTTGTAAGCATGATGCTGCTTTCCATCCACTAGAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGGCAGTCCTTTGTAAGCATGATGCTGCTTTCCATCCACTAGAGCA  450

seq1  CTTCCCACTCCCTTGCTCTACACTCAGTAAGAACACTTGCCCTGTTGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCACTCCCTTGCTCTACACTCAGTAAGAACACTTGCCCTGTTGTGT  500

seq1  CTTCATTGTACTTCAAACGGGTGTCTTTAATTGTCATGTCCTCCTAGGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTGTACTTCAAACGGGTGTCTTTAATTGTCATGTCCTCCTAGGGT  550

seq1  AGCATTAGAGACCAAAACAATTATATATTGATTGTCATCTTGTTCTTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTAGAGACCAAAACAATTATATATTGATTGTCATCTTGTTCTTGTG  600

seq1  GTTTTCAGGGTATCATTGTGTAGCCTAGGCAGGCCTGGAACTCACTGTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCAGGGTATCATTGTGTAGCCTAGGCAGGCCTGGAACTCACTGTCA  650

seq1  CTCCAGCTACCCTCAAACAGTCGATCCCCCTGCTTCAGCCTCCCAATGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGCTACCCTCAAACAGTCGATCCCCCTGCTTCAGCCTCCCAATGTC  700

seq1  AAGATGTCCAGAGTCTGCTAGCACCACCACATGTGGTACACTGGCTTTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGTCCAGAGTCTGCTAGCACCACCACATGTGGTACACTGGCTTTTC  750

seq1  AATCCCACTGGTTTGATTTTTATCCACTTGACACAGCTAGAGTCTTGTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCACTGGTTTGATTTTTATCCACTTGACACAGCTAGAGTCTTGTGG  800

seq1  GAAGAAGGCTCTCATATGAGAGGTGACCTCTATCCAATGCCTAAGGGCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGGCTCTCATATGAGAGGTGACCTCTATCCAATGCCTAAGGGCAT  850

seq1  GTCTGTGGGGCATTTTCTTGATTAATGAGTTATGTGGGATGGTCCAGCCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTGGGGCATTTTCTTGATTAATGAGTTATGTGGGATGGTCCAGCCC  900

seq1  ACTTTGGGCAGTGCCGTCCCTGGGCAGGTGACTGTAGAATGGTGGAAATA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGGGCAGTGCCGTCCCTGGGCAGGTGACTGTAGAATGGTGGAAATA  950

seq1  CTATTGTGCAGTAAAGTCCTTTGAGTGATAAAG-TGCTGTCATGACAAGA  999
      ||||||||||||||||||| ||||||||||||| |||||||||||| |||
seq2  CTATTGTGCAGTAAAGTCC-TTGAGTGATAAAGTTGCTGTCATGAC-AGA  998

seq1  CCTGGCTCTAAAAAGAGATTCCTCTCAGCCCCCATGTTTATATGGTGTGT  1049
      ||| |||||||||||||||  ||||||| |||||||||||||||||||||
seq2  CCT-GCTCTAAAAAGAGAT--CTCTCAG-CCCCATGTTTATATGGTGTGT  1044

seq1  -GTGTGTCTGTGTGTGTGTGTGTCTTTTTCATTAACCTCCCATAGGCTCT  1098
       |||||||||||||||||||||||  ||||| |||||||||||| |||||
seq2  GGTGTGTCTGTGTGTGTGTGTGTC--TTTCA-TAACCTCCCATA-GCTCT  1090

seq1  GTTTTCTTA-TCCAAAAA  1115
      ||||||||| ||||||||
seq2  GTTTTCTTATTCCAAAAA  1108


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