BAC Information

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BAC

Clone NameB6Ng01-244A07
Chromosome4 (Build37)
Map Location 51,998,298 - 51,999,392
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666681, LOC100040814, LOC384015
Downstream geneLOC100041026, LOC100041038, LOC666724, Smc2, LOC100040883, 4930547C10Rik, LOC100040908, LOC666761, Olfr275, Olfr274-ps1, Olfr273, LOC230185, Olfr272, Olfr271-ps1, Olfr270, 1700054F22Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-244A07.bB6Ng01-244A07.g
ACCGA053255GA053256
length1,1731,095
definitionB6Ng01-244A07.b B6Ng01-244A07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgcttagctctgtaccccattttttaatggggttatttgaat
ttctggagaccagcttcttgagctctttgtatatattggatattagttcc
ctatctgatttaggactggtaaaatacctttcccaatctgttggtggcct
ttttgtcttattgacggtgtcttttgccttgcagaagctttgcaacttta
tgaggtcccatttgtcaattcttgatcttacagcacagggcattgctgtt
ttgtttaggaatttttcccctgtgcccatatcttcgaggcttttccccac
tttctcctctatatgtttcactgtctctggttttacgaggagttccttga
tacacttagatttgaccttagtacaaggagataggaatggatcaattccc
attcttctacatgataactgccagttgtgccagcaccatttgttgaaaat
gctgtcttttttccactggatggttttagcacccttgtcaaagatcaagt
gaccatgggtgtgtggattcatttctgtgtctttgattctattccactga
tctacctgtctgtcgctataccagtaccagacagttttttttttttttaa
tcacaattgccctgtagtacagctttagtcagtcatggtgattccaccag
agcttcttttattgttgagaaaagtttttgctatcctaggttttttgtca
ttccatctgaatttgcaaattgcactttctaactctgtgaagaattgagt
tgggattttgatggggatttcattgaatctgtagattgcttttggcagga
tagccatttttactatattaatcctgccaatccataagcatgagaggtct
ttccatcttctgagatcatcttcaattttttttcttcagaggctttaagt
tcttttcatacagatcttcactttccttagagtcataccaaggtatttta
taatgtttgtgactattgtgaagcctgttgtttcctaatttcttctcagc
cctgttattcttggtgtagagaacgctactgaatttatttggagtatatt
tttaaatccagctactgcgcctgacctgaagcctgattatcagtaggagt
ctctggtgaatattaaggttcagtattgcttctagacactcgaatgaatg
agttcctccagttgatgtccgtc
gaattcatttctttgcagcagtagaatgagtggtgtttgcttcttcagca
aaaagaaaaaagaaaaagtaaggccttgctgcttcaagcctgatcattag
actctttattaaaagattatttaaggatgtgaggctcacagaaagggcca
cacccttagattaacctgaaataaactggttagaaaccttaatcatatct
gctaaattgtttgcatctttttcatacaaagttacacctaactggaaaca
gtagcatcgctcctcttctcatggtccacccacattcatcgagagattat
acagtttgtacacagtagcaggattatgcaggaggagaaactttagaggt
tgcattagaattctccctatacatattggaaatgttaggtagtactcttt
taaaggcagaaatgaatcttctatctagtttggtttttaggtttaataat
cttattttgtcacagctttaatggatatgatggaaaacacacacacaagc
atttatttgaggtatctaatgtatcaatttcaactatcccacttctatgt
agactataaaataaatttatgatgaaaagatggttacttcatgggttcaa
gaagggcaggggcactagaaatgtctgtcaaagagcacaagggttcaatt
gtatagaatgagtatggtttggagtgttatagttacattatcactataag
taataatattgtattataaactcaaaatttatgaatatgacagaatctaa
ggttgtctctagtactaaatgggtgcttagtgactgttttgaggccatga
atttctaaacatattcagattttagtactcagtcttagcacttgtttttt
tttattggatatttttaaatttacatttcaaatgttatcccctttcccat
tccctcccccctttggaactctcattccatctcctttccccctgcttctg
tgaaggatgttctccaactacctaccactctgcttcccgtcctggcattc
ccctacactggggcacaaagccctgacattgacaagggcccttcttcact
gaatgcatggacaagtcatcactgcttacataaaacagcctggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_51998298_51999392
seq2: B6Ng01-244A07.g_66_1160

seq1  GAATTCATTTCTTTGCAGCAGTAGAATGAGTGGTGTTTGCTTCTTCAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTCTTTGCAGCAGTAGAATGAGTGGTGTTTGCTTCTTCAGCA  50

seq1  AAAAGAAAAAAGAAAAAGTAAGGCCTTGCTGCTTCAAGCCTGATCATTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAAAAGAAAAAGTAAGGCCTTGCTGCTTCAAGCCTGATCATTAG  100

seq1  ACTCTTTATTAAAAGATTATTTAAGGATGTGAGGCTCACAGAAAGGGCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTTATTAAAAGATTATTTAAGGATGTGAGGCTCACAGAAAGGGCCA  150

seq1  CACCCTTAGATTAACCTGAAATAAACTGGTTAGAAACCTTAATCATATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTTAGATTAACCTGAAATAAACTGGTTAGAAACCTTAATCATATCT  200

seq1  GCTAAATTGTTTGCATCTTTTTCATACAAAGTTACACCTAACTGGAAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAATTGTTTGCATCTTTTTCATACAAAGTTACACCTAACTGGAAACA  250

seq1  GTAGCATCGCTCCTCTTCTCATGGTCCACCCACATTCATCGAGAGATTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCATCGCTCCTCTTCTCATGGTCCACCCACATTCATCGAGAGATTAT  300

seq1  ACAGTTTGTACACAGTAGCAGGATTATGCAGGAGGAGAAACTTTAGAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTTGTACACAGTAGCAGGATTATGCAGGAGGAGAAACTTTAGAGGT  350

seq1  TGCATTAGAATTCTCCCTATACATATTGGAAATGTTAGGTAGTACTCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTAGAATTCTCCCTATACATATTGGAAATGTTAGGTAGTACTCTTT  400

seq1  TAAAGGCAGAAATGAATCTTCTATCTAGTTTGGTTTTTAGGTTTAATAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGCAGAAATGAATCTTCTATCTAGTTTGGTTTTTAGGTTTAATAAT  450

seq1  CTTATTTTGTCACAGCTTTAATGGATATGATGGAAAACACACACACAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTTGTCACAGCTTTAATGGATATGATGGAAAACACACACACAAGC  500

seq1  ATTTATTTGAGGTATCTAATGTATCAATTTCAACTATCCCACTTCTATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTGAGGTATCTAATGTATCAATTTCAACTATCCCACTTCTATGT  550

seq1  AGACTATAAAATAAATTTATGATGAAAAGATGGTTACTTCATGGGTTCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTATAAAATAAATTTATGATGAAAAGATGGTTACTTCATGGGTTCAA  600

seq1  GAAGGGCAGGGGCACTAGAAATGTCTGTCAAAGAGCACAAGGGTTCAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGCAGGGGCACTAGAAATGTCTGTCAAAGAGCACAAGGGTTCAATT  650

seq1  GTATAGAATGAGTATGGTTTGGAGTGTTATAGTTACATTATCACTATAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGAATGAGTATGGTTTGGAGTGTTATAGTTACATTATCACTATAAG  700

seq1  TAATAATATTGTATTATAAACTCAAAATTTATGAATATGACAGAATCTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATATTGTATTATAAACTCAAAATTTATGAATATGACAGAATCTAA  750

seq1  GGTTGTCTCTAGTACT-AATGGGTGCTTAGTGACTGTTTTGAGGCCATGA  799
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GGTTGTCTCTAGTACTAAATGGGTGCTTAGTGACTGTTTTGAGGCCATGA  800

seq1  ATTTCTAAACATATTCAGATTTTAGTACTCAGTCTTAGCACTTG-TTTTT  848
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ATTTCTAAACATATTCAGATTTTAGTACTCAGTCTTAGCACTTGTTTTTT  850

seq1  TTTATTGGATATTTTTAAATTTACATTTCAAATGTTATCCCCTTTCCCAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTGGATATTTTTAAATTTACATTTCAAATGTTATCCCCTTTCCCAT  900

seq1  TCCCTCCCCCCTTGGGAACTCTCATTCCATCTCCCTTCCCCCTGCTTCTG  948
      ||||||||||||| |||||||||||||||||||| |||||||||||||||
seq2  TCCCTCCCCCCTTTGGAACTCTCATTCCATCTCCTTTCCCCCTGCTTCTG  950

seq1  TG-AGGATGTTCTCCCAACTACCTACCCACTCCTGCCTCCCCGTCCTGGC  997
      || |||||||||| ||||||||||| ||||| ||| || |||||||||||
seq2  TGAAGGATGTTCT-CCAACTACCTA-CCACT-CTG-CTTCCCGTCCTGGC  996

seq1  ATTCCCCTACACTGGGGCACAAAGCCTTGACATGACCAAGGGCCCTTCCT  1047
      |||||||||||||||||||||||||| ||||||   ||||||||||||  
seq2  ATTCCCCTACACTGGGGCACAAAGCCCTGACATTGACAAGGGCCCTTC--  1044

seq1  TCCACTG-ATGCAT-GACAAGGCCATTCACTGC-TACAT-AAACAG-CTG  1092
      | ||||| |||||| |||||| |   ||||||| ||||| |||||| |||
seq2  TTCACTGAATGCATGGACAAGTC--ATCACTGCTTACATAAAACAGCCTG  1092

seq1  GAG  1095
      |||
seq2  GAG  1095