BAC Information

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BAC

Clone NameB6Ng01-244E10
Chromosome4 (Build37)
Map Location 51,867,651 - 51,868,674
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040979, LOC666681, LOC100040814
Downstream geneLOC384015, LOC100041026, LOC100041038, LOC666724, Smc2, LOC100040883, 4930547C10Rik, LOC100040908, LOC666761, Olfr275, Olfr274-ps1, Olfr273
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-244E10.bB6Ng01-244E10.g
ACCGA053450GA053451
length1,1821,016
definitionB6Ng01-244E10.b B6Ng01-244E10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccatcttttaagggggttatttgatt
ttctggagtccaccctcttgagttcgttatatatattggatattagtccc
atatctgatttacgataggtaaagatactttcccaatctgttggtggcct
ttttgtcttattgacggtgtcttttgccttgcagaagctttgcagtttca
tgaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtgcccatatcttcgaggcttttccccac
tttctcctctataagttgcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagcatggatcgatgtgc
attcttctacatgataacaaccagttgtaccagcaccatttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccgtaggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtcactataccagtaccatgcaattttttatcacaattg
ctctgtagtaaagctttaggtcagggatggtgattccaccagaagtactt
ttatccttgagaagagtttttgctatcctaggttttttgttattccagat
gaatttgcagattgctctttctaattcgttgaagaattgagttggaattt
tgatggggattgcattgaatctgtagattgcttttggcaagatagccatt
ttttacaatgttgatcctcccaatccatgagcatgggagatctttccatc
ttctgagatctttaattctttcttcagagacttgaagttttatcatacag
attcttttcacttccttagttagagtcaggccaagggtatttttatatta
ttttttgactattgaggaagggtgtgttttccttaattctttcttcagct
taattattctttgttgttacagaatgcatgactgttgagtttgtttatat
ccgctacttcacaagcttgtttatcagttagagtctcctggtggaaattt
aaggttcactattatacctatcgtatcatcgaaaaagggaattttggact
ccttcctactcgaactggatagtctcctgtcg
gaattcagttgagttctgttcagttactccaatctgtgctatcagtgaag
ttgagttcctggaattagaagcagtttttccaagtagagcaattcagtga
aaagttgagaaaattcagtttcaatcagtcagcttagggaggaggttgag
ccagaacagatgagttgaaccagccccaggcaaagttcaaaaagagtgag
aaagggttagtttattcagcattaagcctctgtgatcacaattacatctg
gcaaatgcaagacttttacacccacactacttctcaatatgatggactct
ttttcttttattattcttatttatttattcttccctctatttggagtcct
acaaaaatcccaagctaaccataaatacaaagattcttttactaactcat
ggaggctccaattgttattatttataaacactgaagtttcttccatgtct
gcctatggttaaatagatcattcggagttagcttaataccacatatattg
ctgaagaattgcatcattgagtcatagaacatagataataaataaagctt
actgacctggaagctttatctctactggctagatataatagtactggata
ctatacatactagtgtagaatattcatccttaataatgtagagtagccac
taatgcagaataaccacccaatttcaaaaagagtgtacagagccaaaatg
agaattcttattttgttcttgtgtttgtttgtttgtttgtttgtttgatt
ggttggtgggttttctatattttcattttttcattctttaatctttttgg
tttttgttttgttttgttttcttttgtttgttttttacaaattcagactt
aacccaaggttcaccctctgaattgtctacatccatacctcctctccctc
cctgtctccatgaggatgtccccactctagggtcccaagttctctcaaga
atttcatagagttatctagatggcaggaagtcgtttaaggaatgtgctaa
cattctagtcatcagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_51867651_51868674
seq2: B6Ng01-244E10.g_67_1082

seq1  GAATTCAGTTGAGTTCTGTTCAGTTACTCCAATCTGTGCTATCAGTGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTGAGTTCTGTTCAGTTACTCCAATCTGTGCTATCAGTGAAG  50

seq1  TTGAGTTCCTGGAATTAGAAGCAGTTTTTCCAAGTAGAGCAATTCAGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTTCCTGGAATTAGAAGCAGTTTTTCCAAGTAGAGCAATTCAGTGA  100

seq1  AAAGTTGAGAAAATTCAGTTTCAATCAGTCAGCTTAGGGAGGAGGTTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTGAGAAAATTCAGTTTCAATCAGTCAGCTTAGGGAGGAGGTTGAG  150

seq1  CCAGAACAGATGAGTTGAACCAGCCCCAGGCAAAGTTCAAAAAGAGTGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAACAGATGAGTTGAACCAGCCCCAGGCAAAGTTCAAAAAGAGTGAG  200

seq1  AAAGGGTTAGTTTATTCAGCATTAAGCCTCTGTGATCACAATTACATCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGTTAGTTTATTCAGCATTAAGCCTCTGTGATCACAATTACATCTG  250

seq1  GCAAATGCAAGACTTTTACACCCACACTACTTCTCAATATGATGGACTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATGCAAGACTTTTACACCCACACTACTTCTCAATATGATGGACTCT  300

seq1  TTTTCTTTTATTATTCTTATTTATTTATTCTTCCCTCTATTTGGAGTCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTTATTATTCTTATTTATTTATTCTTCCCTCTATTTGGAGTCCT  350

seq1  ACAAAAATCCCAAGCTAACCATAAATACAAAGATTCTTTTACTAACTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAATCCCAAGCTAACCATAAATACAAAGATTCTTTTACTAACTCAT  400

seq1  GGAGGCTCCAATTGTTATTATTTATAAACACTGAAGTTTCTTCCATGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCTCCAATTGTTATTATTTATAAACACTGAAGTTTCTTCCATGTCT  450

seq1  GCCTATGGTTAAATAGATCATTCGGAGTTAGCTTAATACCACATATATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTATGGTTAAATAGATCATTCGGAGTTAGCTTAATACCACATATATTG  500

seq1  CTGAAGAATTGCATCATTGAGTCATAGAACATAGATAATAAATAAAGCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGAATTGCATCATTGAGTCATAGAACATAGATAATAAATAAAGCTT  550

seq1  ACTGACCTGGAAGCTTTATCTCTACTGGCTAGATATAATAGTACTGGATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACCTGGAAGCTTTATCTCTACTGGCTAGATATAATAGTACTGGATA  600

seq1  CTATACATACTAGTGTAGAATATTCATCCTTAATAATGTAGAGTAGCCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACATACTAGTGTAGAATATTCATCCTTAATAATGTAGAGTAGCCAC  650

seq1  TAATGCAGAATAACCACCCAATTTCAAAAAGAGTGTACAGAGCCAAAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCAGAATAACCACCCAATTTCAAAAAGAGTGTACAGAGCCAAAATG  700

seq1  AGAATTCTTATTTTGTTCTTGTGTTTGTTTGTTTGTTTGTTTGTTTGATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTCTTATTTTGTTCTTGTGTTTGTTTGTTTGTTTGTTTGTTTGATT  750

seq1  GGTTGGTGGGTTTTCTATATTTTCATTTTTTCATTCTTTAATCTTTTTTG  800
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GGTTGGTGGGTTTTCTATATTTTCATTTTTTCATTCTTTAATC-TTTTTG  799

seq1  GTTTTTGTTTTGTTTTGTTTTCTTTTGTTTTGTTTTTTAC-AATTCAGAC  849
      ||||||||||||||||||||||||||| |||||||||||| |||||||||
seq2  GTTTTTGTTTTGTTTTGTTTTCTTTTG-TTTGTTTTTTACAAATTCAGAC  848

seq1  TTAACCCAAGGTTCACCCTCTGATTGTTCTACATCCCATACCTCCTCTCC  899
      ||||||||||||||||||||||| |  ||||||| ||||||||||||| |
seq2  TTAACCCAAGGTTCACCCTCTGAATTGTCTACAT-CCATACCTCCTCT-C  896

seq1  CCTCCCTGTCTCCATGAGGATGTCCCCACCCCTAGGGGCCCCAAGTCTCT  949
      |||||||||||||||||||||||||||| | |||||| ||| |  |||||
seq2  CCTCCCTGTCTCCATGAGGATGTCCCCA-CTCTAGGGTCCCAAGTTCTCT  945

seq1  CAAGGAAATTCATAAGAGTAATCTAGAATGGCCAAGAAG-CGTTTAAAGA  998
      ||| ||| ||||| ||||| |||||| |||| || |||| ||||| ||| 
seq2  CAA-GAATTTCAT-AGAGTTATCTAG-ATGG-CAGGAAGTCGTTT-AAGG  990

seq1  AATGTGC-AACATTCTTAGTCATCAGG  1024
      ||||||| ||||||| |||||||||||
seq2  AATGTGCTAACATTC-TAGTCATCAGG  1016