MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-244J10
Chromosome	4 (Build37)
Map Location	29,080,089 - 29,081,119
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100040735, LOC230044, LOC665141, LOC100040773, Epha7, LOC100040907
Downstream gene	LOC100040811
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100040735 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040735
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	LOC230044 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:230044
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	LOC665141 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665141
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC100040773 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040773
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Epha7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13841 MGI:95276
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040907 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040907
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100040811 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040811
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100040735 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252122 GeneID:100040735
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : similar to retinitis pigmentosa GTPase regulator interacting protein 1 transcript_id : XM_001475161.1

name	Epha7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328169 GeneID:13841 MGI:95276
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Eph receptor A7 transcript_id : NM_010141.2

name	LOC100040907 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252131 GeneID:100040907
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040907 transcript_id : XM_001475496.1

name	LOC100040735 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252123 GeneID:100040735
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475211.1

name	Epha7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328170 CCDS:CCDS18013.1 GeneID:13841 MGI:95276
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0045499 - chemorepellant activity [Evidence IDA]; GO:0005003 - ephrin receptor activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0048755 - branching morphogenesis of a nerve [Evidence IMP]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0031290 - retinal ganglion cell axon guidance [Evidence IMP]; GO:0007169 - transmembrane receptor protein tyrosine kinase signaling pathway [Evidence IEA] codon_start : 1 exception : mismatches in translation product : Eph receptor A7 protein_id : NP_034271.2

name	LOC100040907 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252132 GeneID:100040907
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475546.1

name	LOC230044 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:230044
definition	number : 1 pseudo : _no_value

name	LOC230044 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:230044
definition	number : 2 pseudo : _no_value

name	LOC665141 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665141
definition	number : 1 pseudo : _no_value

name	LOC100040773 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040773
definition	number : 3 pseudo : _no_value

name	LOC100040773 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040773
definition	number : 2 pseudo : _no_value

name	LOC100040773 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040773
definition	number : 1 pseudo : _no_value

name	LOC100040811 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040811
definition	number : 1 pseudo : _no_value

name	LOC100040811 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040811
definition	number : 2 pseudo : _no_value

clone name	MSMg01-065A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-203O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-234I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-188N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194M03
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-244J10.b	B6Ng01-244J10.g
ACC	GA053684	GA053685
length	1,175	1,028
definition	B6Ng01-244J10.b	B6Ng01-244J10.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcaaggccccatacctaaacataataaaagcaatatgcagcaaatc agtagccaatatcaaatggagagaaactcgaaggaatcccactaaaatca gggactagacaaggccacccactctctccctacctaatcaatatagtact caaagtcctagtcagagcaattagaaaacaaaaggagatcaatgggatac aaattgggaaggaagaagtcaaaatattactacttgcagatgataagata gtatacttaagtgatcccaaaaagtccaccagagaagtcataaacctgat aaacaactttaacaagtggctggatataaaattaactcaaacaaataagt agccttcctctactcaaagaatgaacaggccgagaaagaaattagggaaa taacacccttcacagtagtcacaaataatataaaatatcttggtgtgact ctaaccaagcaagtgaaagatctgtatgatacgaacttcaaatctttgag gaaagaaattgaagatctcagaagattaaatgatctctaatgttcatgga ttagcaggattattatattaaaaatggccatcttgctgaaagcaatctac agattcaatgcaatccccatcaaaatttcaactctattctttatagagtt agaaagagcaattttcaaattcatttggaataacaaaaaaacctaggata gtaaaaactattttcagcaataaaagaacttctgagggaatcaccatccc tgaactcaagctgtattatagagcaataatgattaaaactgcatggtatt gatacagagacaggcaggtagatcaatggaagagaattgaagacctagaa atgaacccacaccactatgggttacttgatctttgacaaaggagctaaaa caatcctgtggaaaaaaagacagcattttcaacaaatggtgcttgttaac tggtggtcagcatgcaaaagaatacaaatcgatccattcttatcttcttt tgtacaaagttcaagtccaagtgatcaagacttcacataaaacagatatg ctggaactaatagatgtaaaggtgtgtagagcatgagcatatgaacacag gattttctggaacaacacgatgctagtctgatcacattagacaattggac ctacattaaaatgccaagagtcttg	gaattctcacttgtggtggatcctgatttattcctgcaaaataatggaaa tattgagaaatatttaaatttgtaactttcaaagttatgctaccttggtc ttgttaagacactgaatgacaccataggaaaataaataattatgtaggtt gtaactaaatcattgacctgagagaggggatctcatccattggatatcaa atcaaaatgccgaaaaagatgggtacaaagaaaatgtcttaggctaatga atgagacaactttggacttatacttttgtttcaaagaaaaatagaagctt agaaatatatcaaaacagggggctatcaacttaaattctagtcttcaata catattttcaaatgtcttttgtggttgcagttcatctgtgttactagaag caaattatcatttttaggcactaaaatcacacagaaaaaggatttttttt cttccatttccttaaattaccccatggacaaattattactcctcatcatc accttctttagacagaagaactttagtatttattatcttcttccgggttg gtagcagagcataacaagtagcaatgactttacgacagggcacacagtgg acagagcaaaagaaagaggcaccttgtcaactcaggtagagtcatttgtg attcagaagatcaatgtgctgtcagacgagcttcatgccttttagttagg tagaggtacgttatctttttacgttcaaaattagtgagccctgtatgaac tcaagtattaaaaagcagtgtgagatctatattcattctgtacagttatc ttggcccacgctttgagatcctgtaatcaagagaggaagtaaccaggtcc atcaataaccacctgggagctacccaaagcagcagatgcgcaacagggta atggcagttgcaggacagatctcccagatcctttttgttaaaaatatata aattaattttaaataatggaaagagagggagagagagagagagagagaga agagagagaagattcttgccttcaccca
quality values	Open. Hide. 58 33 30 35 58 35 20 31 58 58 62 62 62 53 41 62 62 62 62 62 62 62 62 47 42 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 62 59 62 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 62 62 59 59 59 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 54 54 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 37 37 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 54 51 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 54 58 58 54 58 58 58 58 58 54 50 58 58 58 58 58 58 58 58 58 45 58 58 49 41 54 58 58 54 46 58 58 58 58 58 47 47 58 58 58 58 51 58 58 51 45 25 54 49 58 48 58 58 46 58 58 58 58 51 51 58 58 58 52 58 58 50 49 58 58 42 42 49 58 53 58 53 53 58 31 37 58 51 47 53 53 54 53 54 41 51 58 58 58 51 47 58 41 37 49 46 54 58 58 58 58 49 58 51 58 58 50 50 52 52 50 51 58 47 52 49 52 54 51 43 58 53 50 50 50 58 51 38 51 52 50 43 58 53 42 51 49 50 58 58 50 50 58 52 53 32 51 54 58 53 51 52 52 54 51 54 54 49 49 50 38 51 54 53 52 52 54 53 54 54 51 53 54 39 49 49 47 39 54 54 53 41 29 54 49 49 54 40 32 50 54 52 53 39 42 45 37 42 45 42 22 54 54 54 54 54 35 44 54 44 39 18 54 32 26 45 45 40 40 54 54 54 47 40 42 53 46 54 54 47 37 34 32 52 34 42 45 33 51 51 47 35 53 51 32 31 53 52 34 45 38 18 49 46 41 32 30 40 28 16 30 31 53 30 46 47 37 45 36 32 34 45 34 20 36 31 32 42 51 33 43 31 31 31 31 30 30 51 31 31 43 31 42 39 31 37 45 29 17 45 31 51 51 37 31 31 31 28 23 33 41 46 29 33 31 31 31 31 28 28 31 25 30 42 25 29 31 25 33 30 22 17 28 33 31 36 31 31 31 32 29 31 30 46 32 31 32 31 35 18 33 33 33 38 31 32 38 31 32 15 32 31 32 31 46 48 23 31 36 32 30 30 46 30 26 38 31 37 29 21 31 37 31 31 18 48 15 32 21 14 31 21 29 33 21 27 24 32 48 31 25 31 18 25 44 14 18 14 31 21 34 36 33 44 44 26 25 21 21 31 21 30 31 35 17 16 17 8 47 47 48 48 47 28 16 26 19 27 30 30 31 33 48 48 28 32 19 29 34 37 48 22 23 20 26 10 34 32 19 17 25 30 8 5 19 19 25 33 28 10 32 26 15 32 32 32 34 32 27 34 11 5 48 48 33 16 25 24 27 23 19 9 40 21 9 15 22 17 21 13 16 11 26 24 28 17 21 19 24 19 12 12 17 18 38 27 5 6 14 18 20 9 32 27 25 13 15 20 14 10 17 21 8 8 10 16 7 11 11 3 10 22 9 4 5 5 5 4 6 17 4 9 13 23 8 28 27 16 7 2 3 2 4 9 17 21 21 16 8 5 24 22 12 12 16 6 10 11 4 5 8 13 2 6 23 11 5 7 6 19 16 2 1 3 7 14 4 7 6 12 17 17 5 21 5 13 5 9 13 3 1 1 4 6 4 13 12 5 3 13 28 11 8 5 4 6 20 8 13 19 14 4 4 3 3 7 5 11 6 12 9 10 6 5 1 1 5 4 4 8 11 23 6 8 4 6 12 11 6 17 4 4 17 4 2 3 5 5 4 10 16 5 8 6 12 28 3 2 3 2 5 21 15 5 9 6 4 2 4 2 1	Open. Hide. 58 36 50 42 62 62 62 42 49 47 62 62 62 62 62 49 62 62 62 32 39 62 62 62 62 47 62 62 54 56 54 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 43 59 62 62 62 62 62 62 62 59 62 62 62 59 62 62 59 62 59 59 62 62 62 59 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 59 59 59 59 49 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 54 54 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 47 42 62 62 62 62 62 62 62 62 62 62 54 45 46 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 45 54 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 54 58 54 58 58 58 52 58 58 58 58 58 54 58 54 58 54 58 54 48 54 58 54 52 58 49 54 58 58 58 58 58 54 51 53 58 58 54 58 58 54 58 58 54 58 58 58 54 49 58 58 58 58 52 49 58 58 52 52 54 58 58 53 58 47 58 58 54 58 58 50 47 58 49 53 58 51 54 58 50 54 58 49 42 58 54 51 50 51 50 58 50 50 58 58 58 49 52 53 53 52 51 58 40 51 51 47 52 42 51 58 46 51 51 58 58 53 41 58 31 31 42 51 29 39 40 39 40 41 49 51 58 51 50 35 36 50 51 53 50 21 58 52 52 37 58 50 52 50 39 53 58 52 53 53 50 50 32 50 37 39 32 58 32 31 35 26 40 34 50 51 58 49 51 42 51 54 40 40 39 32 50 35 30 54 24 40 39 53 39 31 53 53 38 44 35 54 54 53 42 31 53 38 36 39 51 29 45 40 33 15 37 30 27 28 35 52 53 37 40 42 40 54 54 54 40 32 40 31 37 33 29 24 54 54 46 35 37 37 33 32 44 42 34 26 49 41 24 53 32 32 32 32 31 31 32 32 30 13 40 34 39 35 53 42 45 52 53 52 35 31 37 36 33 31 53 31 45 43 31 31 26 31 33 31 31 31 33 42 31 28 31 45 31 36 51 30 31 35 31 31 31 31 33 38 37 25 31 25 31 9 46 16 18 31 26 30 12 46 13 26 43 29 31 32 19 41 30 42 31 25 30 30 38 20 27 31 37 20 35 17 23 25 32 30 36 37 33 31 38 30 37 33 31 31 26 21 37 31 11 21 27 14 20 14 18 20 26 15 12 10 46 12 31 24 36 36 27 34 36 36 9 38 11 30 42 32 31 34 10 5 10 20 32 33 23 35 19 16 30 27 22 47 31 21 30 23 30 21 29 21 29 31 23 34 21 32 16 26 21 32 17 24 22 33 32 21 32 22 31 27 11 20 8 18 15 21 18 48 48 48 30 26 13 14 30 43 43 39 29 30 21 32 19 10 18 30 14 19 21 26 13 11 40 40 21 17 12 16 5 3 9 8 14 21 8 34 17 7 22 8 27 6 34 22 6 6 15 7 18 14 11 6 4 3 4 5 10 6 13 6 6 5 17 7 9 3 3 13 6 27 11 15 6 11 10 16 6 5 2 3 4 10 18 6 7 21 15 6 12 9 14 6 2

Alignment Information

BAC End 1

BAC End 2

seq1: chr4_29080089_29081119
seq2: B6Ng01-244J10.g_69_1096 (reverse)

seq1  TGGGTGAA-GCAAGGATATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  49
      |||||||| ||||| || | ||||||||| ||||||||||||||||||||
seq2  TGGGTGAAGGCAAGAATCT-TCTCTCTCT-TCTCTCTCTCTCTCTCTCTC  48

seq1  TCCCTCTCTTTCCATTTATTTTAAAATTTAATTTATATATTTTTTAACAA  99
      |||||||||||||| ||||||  ||| |||||||||||| ||||||||||
seq2  TCCCTCTCTTTCCA-TTATTT--AAAATTAATTTATATA-TTTTTAACAA  94

seq1  AAAGGATCCTGGGAGATCTGTCCTGCAACTGCCATTACCCTGTTGCGCAT  149
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAT-CTGGGAGATCTGTCCTGCAACTGCCATTACCCTGTTGCGCAT  143

seq1  CCTGCTGC-TTGGGTAGCT-CCAGGTGGTTATTGATGGACCTGGTTACTT  197
       ||||||| |||||||||| ||||||||||||||||||||||||||||||
seq2  -CTGCTGCTTTGGGTAGCTCCCAGGTGGTTATTGATGGACCTGGTTACTT  192

seq1  CCTCTCTTGATTACAGGATCTC-AAGCGT-GGCCAAGATAACTGTACAGA  245
      |||||||||||||||||||||| |||||| ||||||||||||||||||||
seq2  CCTCTCTTGATTACAGGATCTCAAAGCGTGGGCCAAGATAACTGTACAGA  242

seq1  ATGAATATAGATCTCACACTGCTTTTTAATACTTGAGTTCATACAGGGCT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATATAGATCTCACACTGCTTTTTAATACTTGAGTTCATACAGGGCT  292

seq1  CACTAATTTTGAACGTAAAAAGATAACGTACCTCTACCTAACTAAAAGGC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAATTTTGAACGTAAAAAGATAACGTACCTCTACCTAACTAAAAGGC  342

seq1  ATGAAGCTCGTCTGACAGCACATTGATCTTCTGAATCACAAATGACTCTA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGCTCGTCTGACAGCACATTGATCTTCTGAATCACAAATGACTCTA  392

seq1  CCTGAGTTGACAAGGTGCCTCTTTCTTTTGCTCTGTCCACTGTGTGCCCT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGTTGACAAGGTGCCTCTTTCTTTTGCTCTGTCCACTGTGTGCCCT  442

seq1  GTCGTAAAGTCATTGCTACTTGTTATGCTCTGCTACCAACCCGGAAGAAG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGTAAAGTCATTGCTACTTGTTATGCTCTGCTACCAACCCGGAAGAAG  492

seq1  ATAATAAATACTAAAGTTCTTCTGTCTAAAGAAGGTGATGATGAGGAGTA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAAATACTAAAGTTCTTCTGTCTAAAGAAGGTGATGATGAGGAGTA  542

seq1  ATAATTTGTCCATGGGGTAATTTAAGGAAATGGAAGAAAAAAAATCCTTT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTGTCCATGGGGTAATTTAAGGAAATGGAAGAAAAAAAATCCTTT  592

seq1  TTCTGTGTGATTTTAGTGCCTAAAAATGATAATTTGCTTCTAGTAACACA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGTGATTTTAGTGCCTAAAAATGATAATTTGCTTCTAGTAACACA  642

seq1  GATGAACTGCAACCACAAAAGACATTTGAAAATATGTATTGAAGACTAGA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAACTGCAACCACAAAAGACATTTGAAAATATGTATTGAAGACTAGA  692

seq1  ATTTAAGTTGATAGCCCCCTGTTTTGATATATTTCTAAGCTTCTATTTTT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAGTTGATAGCCCCCTGTTTTGATATATTTCTAAGCTTCTATTTTT  742

seq1  CTTTGAAACAAAAGTATAAGTCCAAAGTTGTCTCATTCATTAGCCTAAGA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAAACAAAAGTATAAGTCCAAAGTTGTCTCATTCATTAGCCTAAGA  792

seq1  CATTTTCTTTGTACCCATCTTTTTCGGCATTTTGATTTGATATCCAATGG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCTTTGTACCCATCTTTTTCGGCATTTTGATTTGATATCCAATGG  842

seq1  ATGAGATCCCCTCTCTCAGGTCAATGATTTAGTTACAACCTACATAATTA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGATCCCCTCTCTCAGGTCAATGATTTAGTTACAACCTACATAATTA  892

seq1  TTTATTTTCCTATGGTGTCATTCAGTGTCTTAACAAGACCAAGGTAGCAT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTCCTATGGTGTCATTCAGTGTCTTAACAAGACCAAGGTAGCAT  942

seq1  AACTTTGAAAGTTACAAATTTAAATATTTCTCAATATTTCCATTATTTTG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTGAAAGTTACAAATTTAAATATTTCTCAATATTTCCATTATTTTG  992

seq1  CAGGAATAAATCAGGATCCACCACAAGTGAGAATTC  1031
      ||||||||||||||||||||||||||||||||||||
seq2  CAGGAATAAATCAGGATCCACCACAAGTGAGAATTC  1028

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information