BAC Information

Click to search

BAC

Clone NameB6Ng01-244O05
Chromosome4 (Build37)
Map Location 64,918,898 - 65,024,707
singlet/doubletdoublet
Overlap genePappa
Upstream genenone
Downstream geneAstn2, Trim32
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-244O05.bB6Ng01-244O05.g
ACCGA053914GA053915
length1,091963
definitionB6Ng01-244O05.b B6Ng01-244O05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,918,898 - 64,919,989)(65,023,752 - 65,024,707)
sequence
gaattcctctttggtaggagaagatggttaaaggagagagagatcagtct
gtctagtataagattcactgtaagccagtcctttattgtgcctcagttct
ttctccttcatcctgagacaaaaccttttatttaaaaaaaaaaaagtttt
atgtattctatgcatgagtacaccagcattgctctcttcagacacaccag
aagagggcactagaccccactataggtggttgtgagccaccatgtagttg
ctgggaattgaactcgggacctctggaagaccagttggtgcccttaactg
ctgagccatctctctagccccctgagacagatctaaaggattttccagag
cccaacaggcattctctagtttagtcattcattcattcattcattcattc
attcattcaacaaatacttgtcaaaagtctcccagggtttctagtactcc
tccccccattctgccctcttctctctctctctctctctctctctctacct
ctctcctcccttttcttctcacacttcattcacaatatccctttctgctt
aaagtggaatatattccattataaatctcatcaggctactacaccggagg
taggatggcagagtgatcatttggtcttgctgtagacttcaaattctgca
caatcacctgctcaccacccaatgtaaagccctcaaggaaccctaagtaa
atggatgtaatggaaacaaaaagctccgtttgttttattgttctgttgct
gctgtctttgtttttcctggccgtacatttgtattccatttccttaccct
gttctctttggtgcttgaggcagagggagtgaggaaaagagagagaattc
cccagacaaaacactggcagatggagtgaaggggctcccctaggacacta
gtagcaagagaaactgaattgcagagtccaaggatgttattttttaaaag
agactaacaatagctttgtcagcataatgtgggagaggaaacaagacata
ctcatattctctttctttctctttctctctctctcctctcacttcgtccc
tctctacatcatcattttggctcccgtttctattctctcca
gaattcatcttgctctgctggacataatggaaattccacatgcacatcac
attgttagtgcaaaggctggtgagtttttccaagacttggttttctatac
tgcaattcaaatgtggccaatagctttaccaacagaaagaaaattcccca
aggacaggagcgatgtttattttattcatgaaggaatctttacttattcc
tgtaatagatatatagtttgtagactgtcagagacactgacatctgtgat
ttacttactgtgtccctcccattatcagtgagcagggaagggtttatttg
tttgttggttggttggttggtttgatgtacatgcatgtgtactactgcat
catagccagtgaagcaaataattagtggagcctaggaacttttaatatag
ttgaacacatgttaaggtcagagacctgacagtcatgaagagcccagaac
cctgtgatgaaaatgtcttagttcctccagcatttgtaggttcaagtatt
gttacccaaggagaaaaatactcctgggcatatacccagaagatgctcca
acatattagaaggacacatgctccactatgtgcatagcagccatatttat
aatagccaaaagctggaaacaacccagatgcccctcaacagaggattaga
tacagaaaatgtggtacattttacacaatggaatacagctattaaaaaca
aggacataatgaaatttgcagacaaatggatggaacttgagaatatcatc
ctgagtgaggtgattcagtcacaaaggaacaaatatggtatgtactcact
gataagtggatactagccaaaagtttgggaatattcaaggcataattcac
agaccacatggaagctcaagaagaagtaagaccaaaatgtagatgcctct
ctttgctttttaagagggatgagcaatactccacaggaaggaaaataaca
gagaacaagtggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_64918898_64919989
seq2: B6Ng01-244O05.b_48_1138

seq1  GAATTCCTCTTTGGTAGGAGAAGATGGTTAAAGGAGAGAGAGATCAGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTTTGGTAGGAGAAGATGGTTAAAGGAGAGAGAGATCAGTCT  50

seq1  GTCTAGTATAAGATTCACTGTAAGCCAGTCCTTTATTGTGCCTCAGTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAGTATAAGATTCACTGTAAGCCAGTCCTTTATTGTGCCTCAGTTCT  100

seq1  TTCTCCTTCATCCTGAGACAAAACCTTTTATTTAAAAAAAAAAAAGTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTTCATCCTGAGACAAAACCTTTTATTTAAAAAAAAAAAAGTTTT  150

seq1  ATGTATTCTATGCATGAGTACACCAGCATTGCTCTCTTCAGACACACCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATTCTATGCATGAGTACACCAGCATTGCTCTCTTCAGACACACCAG  200

seq1  AAGAGGGCACTAGACCCCACTATAGGTGGTTGTGAGCCACCATGTAGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGGCACTAGACCCCACTATAGGTGGTTGTGAGCCACCATGTAGTTG  250

seq1  CTGGGAATTGAACTCGGGACCTCTGGAAGACCAGTTGGTGCCCTTAACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAATTGAACTCGGGACCTCTGGAAGACCAGTTGGTGCCCTTAACTG  300

seq1  CTGAGCCATCTCTCTAGCCCCCTGAGACAGATCTAAAGGATTTTCCAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCCATCTCTCTAGCCCCCTGAGACAGATCTAAAGGATTTTCCAGAG  350

seq1  CCCAACAGGCATTCTCTAGTTTAGTCATTCATTCATTCATTCATTCATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACAGGCATTCTCTAGTTTAGTCATTCATTCATTCATTCATTCATTC  400

seq1  ATTCATTCAACAAATACTTGTCAAAAGTCTCCCAGGGTTTCTAGTACTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTCAACAAATACTTGTCAAAAGTCTCCCAGGGTTTCTAGTACTCC  450

seq1  TCCCCCCATTCTGCCCTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCCATTCTGCCCTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTACCT  500

seq1  CTCTCCTCCCTTTTCTTCTCACACTTCATTCACAATATCCCTTTCTGCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTCCCTTTTCTTCTCACACTTCATTCACAATATCCCTTTCTGCTT  550

seq1  AAAGTGGAATATATTCCATTATAAATCTCATCAGGCTACTACACCGGAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGGAATATATTCCATTATAAATCTCATCAGGCTACTACACCGGAGG  600

seq1  TAGGATGGCAGAGTGATCATTTGGTCTTGCTGTAGACTTCAAATTCTGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATGGCAGAGTGATCATTTGGTCTTGCTGTAGACTTCAAATTCTGCA  650

seq1  CAATCACCTGCTCACCACCCAATGTAAAGCCCTCAAGGAACCCTAAGTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCACCTGCTCACCACCCAATGTAAAGCCCTCAAGGAACCCTAAGTAA  700

seq1  ATGGATGTAATGGAAACAAAAAGCTCCGTTTGTTTTATTGTTCTGTTGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATGTAATGGAAACAAAAAGCTCCGTTTGTTTTATTGTTCTGTTGCT  750

seq1  GCTGTCTTTGTTTTTCCTGGCCGTACATTTGTATTCCA-TTCCTTACCCT  799
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GCTGTCTTTGTTTTTCCTGGCCGTACATTTGTATTCCATTTCCTTACCCT  800

seq1  GTTCTCTTTGGTGCTTGAGGCAGAGGGAGTGAGGAAAAGAGAGAGAATTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCTTTGGTGCTTGAGGCAGAGGGAGTGAGGAAAAGAGAGAGAATTC  850

seq1  CCCAGACAAAACACTGGCAGATGGAGTGAAGGGGCTCCCCTAGGACACTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGACAAAACACTGGCAGATGGAGTGAAGGGGCTCCCCTAGGACACTA  900

seq1  GTAGCAAGAGAAACTGAATTGCAGAGTCCAAGGATGTTA-TTTTTAAAAG  948
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GTAGCAAGAGAAACTGAATTGCAGAGTCCAAGGATGTTATTTTTTAAAAG  950

seq1  AGACTAACAATAGCTTTGTCAGCATAATGTTGGAGAGGAAACAAGACATA  998
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AGACTAACAATAGCTTTGTCAGCATAATGTGGGAGAGGAAACAAGACATA  1000

seq1  CTCATATTCTCTTTCTTTCTCTTTCTCTCTCTCTCCTTCTCACTCCTTCC  1048
      |||||||||||||||||||||||||||||||||||| ||||||| | |||
seq2  CTCATATTCTCTTTCTTTCTCTTTCTCTCTCTCTCC-TCTCACTTCGTCC  1049

seq1  CTCTCTACATTCATTCATTTTTGCTCCCCTTTCTATTCTCTCCA  1092
      ||||||||| ||| ||||||| |||||| |||||||||||||||
seq2  CTCTCTACA-TCA-TCATTTTGGCTCCCGTTTCTATTCTCTCCA  1091

seq1: chr4_65023752_65024707
seq2: B6Ng01-244O05.g_68_1030 (reverse)

seq1  ACCACTTGGTCTCTG-TATTT--CCTCCTGT-GAGTATTTTGCTCATCCT  46
      |||||||| |||||| |||||  | |||||| |||||  |||||||||| 
seq2  ACCACTTGTTCTCTGTTATTTTCCTTCCTGTGGAGTA--TTGCTCATCCC  48

seq1  TC-TAAAAAGCAA--GGAGGCATCTACATTTTGGTCTTACTTCTTCTTGA  93
      || ||||||||||   ||||||||||||||||||||||||||||||||||
seq2  TCTTAAAAAGCAAAGAGAGGCATCTACATTTTGGTCTTACTTCTTCTTGA  98

seq1  GCTT-CATGTGGTCTGTGAATTATGCCTTGGATATT-CCAAACTTTTGGG  141
      |||| ||||||||||||||||||||||||| ||||| |||||||||| ||
seq2  GCTTCCATGTGGTCTGTGAATTATGCCTTGAATATTCCCAAACTTTT-GG  147

seq1  CTAGTATCCACTTATCAGTGAGTACATACCATATTTGTTCCTTTGTGACT  191
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTATCCACTTATCAGTGAGTACATACCATATTTGTTCCTTTGTGACT  197

seq1  GAATCACCTCACTCAGGATGATATTCTCAAGTTCCATCCATTTGTCTGCA  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCACCTCACTCAGGATGATATTCTCAAGTTCCATCCATTTGTCTGCA  247

seq1  AATTTCATTATGTCCTTGTTTTTAATAGCTGTATTCCATTGTGT-AAATG  290
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AATTTCATTATGTCCTTGTTTTTAATAGCTGTATTCCATTGTGTAAAATG  297

seq1  TACCACATTTTCTGTATCTAATCCTCTGTTGAGGGGCATCTGGGTTGTTT  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCACATTTTCTGTATCTAATCCTCTGTTGAGGGGCATCTGGGTTGTTT  347

seq1  CCAGCTTTTGGCTATTATAAATATGGCTGCTATGCACATAGTGGAGCATG  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTTTTGGCTATTATAAATATGGCTGCTATGCACATAGTGGAGCATG  397

seq1  TGTCCTTCTAATATGTTGGAGCATCTTCTGGGTATATGCCCAGGAGTATT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTCTAATATGTTGGAGCATCTTCTGGGTATATGCCCAGGAGTATT  447

seq1  TTTCTCCTTGGGTAACAATACTTGAACCTACAAATGCTGGAGGAACTAAG  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCTTGGGTAACAATACTTGAACCTACAAATGCTGGAGGAACTAAG  497

seq1  ACATTTTCATCACAGGGTTCTGGGCTCTTCATGACTGTCAGGTCTCTGAC  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTCATCACAGGGTTCTGGGCTCTTCATGACTGTCAGGTCTCTGAC  547

seq1  CTTAACATGTGTTCAACTATATTAAAAGTTCCTAGGCTCCACTAATTATT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACATGTGTTCAACTATATTAAAAGTTCCTAGGCTCCACTAATTATT  597

seq1  TGCTTCACTGGCTATGATGCAGTAGTACACATGCATGTACATCAAACCAA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCACTGGCTATGATGCAGTAGTACACATGCATGTACATCAAACCAA  647

seq1  CCAACCAACCAACAAACAAATAAACCCTTCCCTGCTCACTGATAATGGGA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCAACCAACAAACAAATAAACCCTTCCCTGCTCACTGATAATGGGA  697

seq1  GGGACACAGTAAGTAAATCACAGATGTCAGTGTCTCTGACAGTCTACAAA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACACAGTAAGTAAATCACAGATGTCAGTGTCTCTGACAGTCTACAAA  747

seq1  CTATATATCTATTACAGGAATAAGTAAAGATTCCTTCATGAATAAAATAA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATATCTATTACAGGAATAAGTAAAGATTCCTTCATGAATAAAATAA  797

seq1  ACATCGCTCCTGTCCTTGGGGAATTTTCTTTCTGTTGGTAAAGCTATTGG  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCGCTCCTGTCCTTGGGGAATTTTCTTTCTGTTGGTAAAGCTATTGG  847

seq1  CCACATTTGAATTGCAGTATAGAAAACCAAGTCTTGGAAAAACTCACCAG  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATTTGAATTGCAGTATAGAAAACCAAGTCTTGGAAAAACTCACCAG  897

seq1  CCTTTGCACTAACAATGTGATGTGCATGTGGAATTTCCATTATGTCCAGC  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGCACTAACAATGTGATGTGCATGTGGAATTTCCATTATGTCCAGC  947

seq1  AGAGCAAGATGAATTC  956
      ||||||||||||||||
seq2  AGAGCAAGATGAATTC  963