BAC Information

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BAC

Clone NameB6Ng01-245L12
Chromosome4 (Build37)
Map Location 77,925,001 - 77,926,165
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039974, LOC100039996
Downstream geneLOC100040026, LOC100040036
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-245L12.bB6Ng01-245L12.g
ACCGA054532GA054533
length1,2151,163
definitionB6Ng01-245L12.b B6Ng01-245L12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccgcatttttttaatagggttatttaat
tttctggagtccaccatcttgagttctttatatatagtggatattagtcc
cctatctgatttaggatatgtaaagatcctttcccaatctgttggtggcc
tttttgtcttattgacagtgtcttttgccttacagaagttttgcaatttt
atgaggtcccatttgtcgattttcaatcttatagaactagccattgttgt
tcaattcaggaatttttccccggtgcccatatccttcaggcctttcccca
ctttctcctctgtaagtttcacagtctctggttttctgtggccacttaga
tttgacctcagtacgaggagataggaatggatcaattcccattcttctac
atgataaccaccagttgtgccagcaccatttgttgaaattgctgtctttt
tttcactggatgttttttgctcccttgtcaaagatcaagtgaccaggggt
gtgtggaatcatctctgggtcttcaattcttttccattggtctacttcaa
ttggttccattgtcgctataccagtaccatgcatttattaacgcaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagactttttgctatcctagggtttttgttattccagatg
aatctaccgattgccctttctaattcgttgaagaattgaatgggaatttt
gatggggattgcattgagtctgtagattgcttttagcaaaatagccattt
ttactttattgatcctaccaatccatgagcatgagagatctttcaatctt
cctgagtcatgccaaggtattttatattatttgtgactattgagaaaggt
gtggttttccctaattactctctcagactgtttttccttttgtgtagcaa
atggccattgacttgtttgagttaattttatattccagctacttcactga
agctgttatcaggttaggagtctctgggtgaattttttaggctccactta
ttatatagcggttcatatcattcctccaaaactggaattttggaccttct
ccttttgccaaatttgtttctcttaatctccctcggagtgtacaatgctc
tgactaggaactctagtactatgttgaaataaggtctaggggataaatat
gtgtggcgactaggc
gaattctaattagtgcaggggccccagcctgccttcattggaaccattac
taggtaggttatttggaaccatttagaaaaaaaatctgaccataagctga
caagaggtccagtaaacatttactccatggttcctgctgctcttcttgaa
tgtgaaatgagttccttggttggaagaactgctgtgtataaaataagaag
ctacattgtctgggttctgcttttgatttcatgtggttatgatccggaaa
tctaagccaaattaattttttcatccaccaaaatgatttctgttatggtg
tttgtcacagcagcagaaaggaaactaaactatattgaagaatactgata
tattagtaaagattgtaggtagttaacttgactaggatattgttttcctt
gaaaacaaaatttaatgtacttcatattacctgataatgatgattggtga
gtatctcctttgctgttcttgttgttgttaataataatctgttttatgtg
ttttgatcacacatgagagagagagagagagagagagagagagagagaga
gagagagagagagagagtcagacacactgaaagacagacagacaaacaga
cataaatagaggcaaagagtcgatacaaaactttaaggagtcaactctct
ccttcctcaatataggttttgggagccaaactccagtaaccagattgagt
tatatcatttcctccatgcaggtttttagatagcttataacatttctcag
aatacttttttgatacacttactgtgtgatccaaaataggccagaattca
aagcagtaggaaaaaaaaatgcactctacagcatcagatcaggacacaga
tgcaagcttttctgttactcaaagtgtgctgtatcaacctcatcatgcta
catggatgagggtacttaggagactgaattgaacctctaaagagttctag
ttggggaaaaacaagtatgcagagtctcctattctgtgtattcaggtcaa
gcttgcttaacttaatctgtttctagctcctagcagatacatggatctgg
atcatcagggatgactgaaacctacattttatgtttaaaaacaacattag
agcattgatgattcacaaattttctagtaaggaagccatatcaatggtcc
aagagaaaacgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_77925001_77926165
seq2: B6Ng01-245L12.g_66_1228 (reverse)

seq1  TGCGTTTTCTCTTGGACAATGAATTATGCTTCCTTACCTAG-AAATTTGT  49
      ||||||||||||||||| ||  ||   ||||||||| |||| ||||||||
seq2  TGCGTTTTCTCTTGGACCATTGATATGGCTTCCTTA-CTAGAAAATTTGT  49

seq1  GATTCATCAATTCTCTTAATGTTGTTTTTAAACATAAAAATTGTGGGTTT  99
      || |||||||| ||| |||||||||||||||||||||||  ||| || ||
seq2  GAATCATCAATGCTC-TAATGTTGTTTTTAAACATAAAA--TGTAGG-TT  95

seq1  TCAGTCAT-CCTGATGATCAGAATCCATGTATCTGCTAGGAGCTAGAAAC  148
      |||||||| ||||||||||   ||||||||||||||||||||||||||||
seq2  TCAGTCATCCCTGATGATCCAGATCCATGTATCTGCTAGGAGCTAGAAAC  145

seq1  AGATTTAAAGTT-AGCAAGCTTGACCTGAATACACAGAATAGGAGACTCT  197
      |||||  ||||| |||||||||||||||||||||||||||||||||||||
seq2  AGATT--AAGTTAAGCAAGCTTGACCTGAATACACAGAATAGGAGACTCT  193

seq1  GCATAC-TGTTTTCCCCAAACTAGAACTCTTTAGAGGTTCAATTCAGTCT  246
      |||||| |||||| ||| ||||||||||||||||||||||||||||||||
seq2  GCATACTTGTTTTTCCCCAACTAGAACTCTTTAGAGGTTCAATTCAGTCT  243

seq1  CCTAAGTACCCTCATCCATGTAGCATGATGAGGTTGATACAGCACACTTT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAGTACCCTCATCCATGTAGCATGATGAGGTTGATACAGCACACTTT  293

seq1  GAGTAACAGAAAAGCTTGCATCTGTGTCCTGATCTGATGCTGTAGAGTGC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAACAGAAAAGCTTGCATCTGTGTCCTGATCTGATGCTGTAGAGTGC  343

seq1  A-TTTTTTTTCCTACTGCTTTGAATTCTGGCCTATTTTGGATCACACAGT  395
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTTTCCTACTGCTTTGAATTCTGGCCTATTTTGGATCACACAGT  393

seq1  AAGTGTATCAAAAAAGTATTCTGAGAAATGTTATAAGCTATCTAAAAACC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTATCAAAAAAGTATTCTGAGAAATGTTATAAGCTATCTAAAAACC  443

seq1  TGCATGGAGGAAATGATATAACTCAATCTGGTTACTGGAGTTTGGCTCCC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGGAGGAAATGATATAACTCAATCTGGTTACTGGAGTTTGGCTCCC  493

seq1  AAAACCTATATTGAGGAAGGAGAGAGTTGACTCCTTAAAGTTTTGTATCG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCTATATTGAGGAAGGAGAGAGTTGACTCCTTAAAGTTTTGTATCG  543

seq1  ACTCTTTGCCTCTATTTATGTCTGTTTGTCTGTCTGTCTTTCAGTGTGTC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTTGCCTCTATTTATGTCTGTTTGTCTGTCTGTCTTTCAGTGTGTC  593

seq1  TGACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  643

seq1  TCTCTCATGTGTGATCAAAACACATAAAACAGATTATTATTAACAACAAC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCATGTGTGATCAAAACACATAAAACAGATTATTATTAACAACAAC  693

seq1  AAGAACAGCAAAGGAGATACTCACCAATCATCATTATCAGGTAATATGAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACAGCAAAGGAGATACTCACCAATCATCATTATCAGGTAATATGAA  743

seq1  GTACATTAAATTTTGTTTTCAAGGAAAACAATATCCTAGTCAAGTTAACT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATTAAATTTTGTTTTCAAGGAAAACAATATCCTAGTCAAGTTAACT  793

seq1  ACCTACAATCTTTACTAATATATCAGTATTCTTCAATATAGTTTAGTTTC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACAATCTTTACTAATATATCAGTATTCTTCAATATAGTTTAGTTTC  843

seq1  CTTTCTGCTGCTGTGACAAACACCATAACAGAAATCATTTTGGTGGATGA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGCTGCTGTGACAAACACCATAACAGAAATCATTTTGGTGGATGA  893

seq1  AAAAATTAATTTGGCTTAGATTTCCGGATCATAACCACATGAAATCAAAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTAATTTGGCTTAGATTTCCGGATCATAACCACATGAAATCAAAA  943

seq1  GCAGAACCCAGACAATGTAGCTTCTTATTTTATACACAGCAGTTCTTCCA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAACCCAGACAATGTAGCTTCTTATTTTATACACAGCAGTTCTTCCA  993

seq1  ACCAAGGAACTCATTTCACATTCAAGAAGAGCAGCAGGAACCATGGAGTA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGGAACTCATTTCACATTCAAGAAGAGCAGCAGGAACCATGGAGTA  1043

seq1  AATGTTTACTGGACCTCTTGTCAGCTTATGGTCAGATTTTTTTTCTAAAT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTACTGGACCTCTTGTCAGCTTATGGTCAGATTTTTTTTCTAAAT  1093

seq1  GGTTCCAAATAACCTACCTAGTAATGGTTCCAATGAAGGCAGGCTGGGGC  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCAAATAACCTACCTAGTAATGGTTCCAATGAAGGCAGGCTGGGGC  1143

seq1  CCCTGCACTAATTAGAATTC  1165
      ||||||||||||||||||||
seq2  CCCTGCACTAATTAGAATTC  1163