BAC Information

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BAC

Clone NameB6Ng01-245O16
Chromosome4 (Build37)
Map Location 68,291,203 - 68,292,346
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC433715, Tcp1-ps1
Downstream geneDbc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-245O16.bB6Ng01-245O16.g
ACCGA054675GA054676
length1,1391,186
definitionB6Ng01-245O16.b B6Ng01-245O16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatatgcctttagaattataggacttatcatagcatgtgttgaa
cacagagccaaggaaactttgaaacaccttgaaaggagtatgaagcttat
tgaaaaatgataattctaaatctatctatgggttttaagttattagaaat
attaatgaataaaaaaacaaccctagtcaactaatggaaaccaaagcaga
gaggaactggagtggagagagactcagacccaaagcttgctttgcagatc
tttcagtgtgcaaacaatagctgagcaaacacatattccaaaggtattac
caatattaggcaagtaactaggcaactaaaagatttgtaaaggaaataca
acattacgtgaaatgcaaggaagtgttttaagaagacaaggcatggatta
gcagctctgtgattcatggaaacagcagaggtgctgtctgcctctggtag
ggggacaaaacttagtaaagagatattgcaggagagctgtgacagtgagc
agatgataaacatagatgtaggcccagggcatcttcacttcaattatttt
actcttaatgtgatcttagcaaatctgaggatattaatctctcatttcct
tttgcttcacttgggtttggttcatatatattgaaaccaacttctctata
atacttgtttaggcaaagtgaagcctctgttctttcaaaaacctattagg
tgccagccgttacagtattacactactcaatagcattgtatataattcac
aattcacccacagatacatgaacatttagtaggggtgctgtaatttattt
aaccaggtcacatattagtattttttccatccttctgtaaaacccagtct
atatagcattacattcatccactcctcctacatcaccaatcaaattaaga
atacatagaattatttcctccagctgggttcaccaggagccttcaaaagc
tgctgctcagatttaaggaataagaaatgatttgcaaaaggatccatgtc
ctttagtgttgagtctgtcaatttctcaagcagtgctcctgatgtgacaa
gttcacatgcttcttagcatcaatttttcttcaccaatggtaaaagcata
cgaagtcagccaaatattgctgtggctcaatataagcaa
gaattccatacattgggttatcaagcattcacaggaccaaggacctctcc
tcccattgatgcccaacaaggccattctctgctacatatgcagctggtgc
catgagtccctctatgcgtactctttggttggtggttcagtccctaggag
ctctgggagatctggaaggttgatattttgttcttcctatggggttgcaa
acaccttcagctccttcagtccattttctaagtactccattggggacccc
atgcacagtcaaatggttgactgagcaaacacctctgtacttgtcaggct
ctgtcagagtctctcaggggacagctatatcaggctcctgttagcacttc
acatcaacaacagcttctgggtttagtgactgtgtatgagatagattccc
aagttgggcagtctctggatggccttaccttcactctctgctccacactt
tgtctctgtatttgccttcatgagtattttgttcccctttctaaggatag
aaacacccacactttggtcttccttcttcttgagcttcatgtgatctatg
aattgtattttggctattccaagcttctgggacaatatccacatatcagt
gagtgcatatcatgtgtgttcttttgtgactgggttacctaactcatgat
gatattttctagttccatctatttgcctaaaaatttcatgaagtcattgt
tttaatagccgagtagtactccatttattaattctgttagaagcctgttg
tcaatgcacctcaaatcatacttctagaaaatatggggggctatacttcc
tagcataatctcacgtgctagcattgcttataaaagaagagacaccatct
atactcctaatgctttcttaataatttcttaaagtatgttctaaactggc
actctgtagctgtacattttaattgttaccctcttgttcttcattgcaag
gtgatttatcagaaggaaaaaatgctgaaagagtcaaatcaaatacaggc
tagtctcattattcaaatttcgctattcagaccagactcaacatagtttt
aagttattctagaagcaaacacaatttctaagttaattacagtagaaata
ggattttggagggggagaaagaagttcacgaatcgacacagtctccctaa
ataatattataggggtgtttactcacgacaggaggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_68291203_68292346
seq2: B6Ng01-245O16.b_46_1184

seq1  GAATTCCATATGCCTTTAGAATTATAGGACTTATCATAGCATGTGTTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATATGCCTTTAGAATTATAGGACTTATCATAGCATGTGTTGAA  50

seq1  CACAGAGCCAAGGAAACTTTGAAACACCTTGAAAGGAGTATGAAGCTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAGCCAAGGAAACTTTGAAACACCTTGAAAGGAGTATGAAGCTTAT  100

seq1  TGAAAAATGATAATTCTAAATCTATCTATGGGTTTTAAGTTATTAGAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAATGATAATTCTAAATCTATCTATGGGTTTTAAGTTATTAGAAAT  150

seq1  ATTAATGAATAAAAAAACAACCCTAGTCAACTAATGGAAACCAAAGCAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATGAATAAAAAAACAACCCTAGTCAACTAATGGAAACCAAAGCAGA  200

seq1  GAGGAACTGGAGTGGAGAGAGACTCAGACCCAAAGCTTGCTTTGCAGATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAACTGGAGTGGAGAGAGACTCAGACCCAAAGCTTGCTTTGCAGATC  250

seq1  TTTCAGTGTGCAAACAATAGCTGAGCAAACACATATTCCAAAGGTATTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGTGTGCAAACAATAGCTGAGCAAACACATATTCCAAAGGTATTAC  300

seq1  CAATATTAGGCAAGTAACTAGGCAACTAAAAGATTTGTAAAGGAAATACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATTAGGCAAGTAACTAGGCAACTAAAAGATTTGTAAAGGAAATACA  350

seq1  ACATTACGTGAAATGCAAGGAAGTGTTTTAAGAAGACAAGGCATGGATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTACGTGAAATGCAAGGAAGTGTTTTAAGAAGACAAGGCATGGATTA  400

seq1  GCAGCTCTGTGATTCATGGAAACAGCAGAGGTGCTGTCTGCCTCTGGTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTCTGTGATTCATGGAAACAGCAGAGGTGCTGTCTGCCTCTGGTAG  450

seq1  GGGGACAAAACTTAGTAAAGAGATATTGCAGGAGAGCTGTGACAGTGAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACAAAACTTAGTAAAGAGATATTGCAGGAGAGCTGTGACAGTGAGC  500

seq1  AGATGATAAACATAGATGTAGGCCCAGGGCATCTTCACTTCAATTATTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGATAAACATAGATGTAGGCCCAGGGCATCTTCACTTCAATTATTTT  550

seq1  ACTCTTAATGTGATCTTAGCAAATCTGAGGATATTAATCTCTCATTTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTAATGTGATCTTAGCAAATCTGAGGATATTAATCTCTCATTTCCT  600

seq1  TTTGCTTCACTTGGGTTTGGTTCATATATATTGAAACCAACTTCTCTATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTCACTTGGGTTTGGTTCATATATATTGAAACCAACTTCTCTATA  650

seq1  ATACTTGTTTAGGCAAAGTGAAGCCTCTGTTCTTTCAAAAACCTATTAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTGTTTAGGCAAAGTGAAGCCTCTGTTCTTTCAAAAACCTATTAGG  700

seq1  TGCCAGCCGTTACAGTATTACACTACTCAATAGCATTGTATATAATTCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGCCGTTACAGTATTACACTACTCAATAGCATTGTATATAATTCAC  750

seq1  AATTCACCCACAGATACATGAACATTTAGTAGGGGTGCTGTAATTTATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCACCCACAGATACATGAACATTTAGTAGGGGTGCTGTAATTTATTT  800

seq1  AACCAGGTCACATATTAGTATTTTTTCCATCCTTCTGTAAAACCCAGTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGGTCACATATTAGTATTTTTTCCATCCTTCTGTAAAACCCAGTCT  850

seq1  ATATAGCATTACATTCATCCACTCCTCCTACATCACCAATCAAATTAAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGCATTACATTCATCCACTCCTCCTACATCACCAATCAAATTAAGA  900

seq1  ATACATAGAATTATTTCCTCCAGCTGGGTTCAC--AGAGCCTTCAAAAGC  948
      |||||||||||||||||||||||||||||||||   ||||||||||||||
seq2  ATACATAGAATTATTTCCTCCAGCTGGGTTCACCAGGAGCCTTCAAAAGC  950

seq1  TGCTGCTCAGATTTAAGGAATAAGAAATGA-TTGCAAAAGGATCCATGTC  997
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TGCTGCTCAGATTTAAGGAATAAGAAATGATTTGCAAAAGGATCCATGTC  1000

seq1  CTTTAGTGTTGAGTCTGTCAATTTCTCAGGCAGTGCT-CTGATGTGACAA  1046
      |||||||||||||||||||||||||||| |||||||| ||||||||||||
seq2  CTTTAGTGTTGAGTCTGTCAATTTCTCAAGCAGTGCTCCTGATGTGACAA  1050

seq1  GTTCACATGCTTCTTAGCATTCAATTTTC-TCACAAAATGGAAAAGGCAA  1095
      ||||||||||||||||||||  | ||||| ||||  ||||| ||| ||| 
seq2  GTTCACATGCTTCTTAGCATCAATTTTTCTTCAC-CAATGGTAAAAGCA-  1098

seq1  TTACAGAAGTCAGCAAAATATTGTTGTGGGCTCAAAAATAATTAAGCAA  1144
       ||| ||||||||| |||||||| ||| ||||||| |     |||||||
seq2  -TAC-GAAGTCAGCCAAATATTGCTGT-GGCTCAATA-----TAAGCAA  1139