BAC Information

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BAC

Clone NameB6Ng01-246C14
Chromosome4 (Build37)
Map Location 137,560,609 - 137,561,584
singlet/doubletsinglet
Overlap geneEif4g3
Upstream geneZbtb40, Wnt4, Cdc42, LOC665533, LOC242711, Ela3, 1700013G24Rik, Hspg2, Ldlrad2, Usp48, Rap1gap, Akp2, Ece1, LOC100040558
Downstream geneHp1bp3, Kif17, Ddost, Pink1, Cda, LOC625638, LOC625646, 0610009K11Rik, Camk2n1, LOC100040618, 4931403E03Rik, Ubxd3, Pla2g2c, Pla2g2f, Pla2g2d, Pla2g5, Pla2g2a, Pla2g2e, Otud3, Rnf186, Tmco4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-246C14.bB6Ng01-246C14.g
ACCGA054856GA054857
length197988
definitionB6Ng01-246C14.b B6Ng01-246C14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
cagggcagccagggctacccctaagaaagggagagagaaaaaataaacca
gacaaaataacagcattatgggccgggcagagacggtgcatcctcttaat
cccagcactcgggaggcagaggcaggcagacagatctctatgagttcaag
gctagcctggtccacaaagtgagttctaggatagatagccagggcta
gaattcttgaggcttattcgaggtagctaatactctcaatattacattgt
cgatctttcagaaatagaacttgaacaagttcaacttcctgaggtaactg
ctgtttgtagagctgacatgagtacttgacccttcatgttgtagtgagtg
gtggagtttgcctggagctgactgttggtatggacactctgtgatttcat
tcttgacttctttattcattccctttacattctgaccagacaccctgacc
accctatccccattccctcctctcccagtcccagcctctaggctgtcctc
tccccaccgaggccagacacagtagcccagttaggggaaagagatatcca
aaggcagagacagcccctggtgcagttgttaggggacccacatggagaca
aagctgcacctctgtatagggagcgtaggtccagcccctgcatgctcttt
ggttggttcagtctctgtgagcccccgtggttaactaacccagggtagtt
tactctgaagatcttcttgtggtgtcttagacccctctggctcacccagt
cctctgcctactcttccacaggactccccgggcttcatctagtgtttggc
tgtgtgtctctgcatctgtttccatccgctgctggaagaagtatctaaga
agagggctatgttaggctcttgtcattcttaaaaaaaaaaaagttacaaa
gagtgtctggggaggtggctcagtggctaagagggtccttaagctcaaaa
ctgcctataattccagctttcagcagaccctacacccacttctggcttct
gagtacccatccacacctggtttgtgcatatacacatcccaaataagaaa
aaaaatgaaggtaaagttttcttttcttttttttttttttttgggttttc
ttttttttccggttcctttggtttgtttgcttgatagattttcgagggca
agggtttcctcttgtaataagccctggctgttctggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_137560609_137561584
seq2: B6Ng01-246C14.g_69_1056

seq1  GAATTCTTGAGGCTTATTCGAGGTAGCTAATACTCTCAATATTACATTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGAGGCTTATTCGAGGTAGCTAATACTCTCAATATTACATTGT  50

seq1  CGATCTTTCAGAAATAGAACTTGAACAAGTTCAACTTCCTGAGGTAACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATCTTTCAGAAATAGAACTTGAACAAGTTCAACTTCCTGAGGTAACTG  100

seq1  CTGTTTGTAGAGCTGACATGAGTACTTGACCCTTCATGTTGTAGTGAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTGTAGAGCTGACATGAGTACTTGACCCTTCATGTTGTAGTGAGTG  150

seq1  GTGGAGTTTGCCTGGAGCTGACTGTTGGTATGGACACTCTGTGATTTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGTTTGCCTGGAGCTGACTGTTGGTATGGACACTCTGTGATTTCAT  200

seq1  TCTTGACTTCTTTATTCATTCCCTTTACATTCTGACCAGACACCCTGACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGACTTCTTTATTCATTCCCTTTACATTCTGACCAGACACCCTGACC  250

seq1  ACCCTATCCCCATTCCCTCCTCTCCCAGTCCCAGCCTCTAGGCTGTCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTATCCCCATTCCCTCCTCTCCCAGTCCCAGCCTCTAGGCTGTCCTC  300

seq1  TCCCCACCGAGGCCAGACACAGTAGCCCAGTTAGGGGAAAGAGATATCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCACCGAGGCCAGACACAGTAGCCCAGTTAGGGGAAAGAGATATCCA  350

seq1  AAGGCAGAGACAGCCCCTGGTGCAGTTGTTAGGGGACCCACATGGAGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGAGACAGCCCCTGGTGCAGTTGTTAGGGGACCCACATGGAGACA  400

seq1  AAGCTGCACCTCTGTATAGGGAGCGTAGGTCCAGCCCCTGCATGCTCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGCACCTCTGTATAGGGAGCGTAGGTCCAGCCCCTGCATGCTCTTT  450

seq1  GGTTGGTTCAGTCTCTGTGAGCCCCCGTGGTTAACTAACCCAGGGTAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGTTCAGTCTCTGTGAGCCCCCGTGGTTAACTAACCCAGGGTAGTT  500

seq1  TACTCTGAAGATCTTCTTGTGGTGTCTTAGACCCCTCTGGCTCACCCAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTGAAGATCTTCTTGTGGTGTCTTAGACCCCTCTGGCTCACCCAGT  550

seq1  CCTCTGCCTACTCTTCCACAGGACTCCCCGGGCTTCATCTAGTGTTTGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCCTACTCTTCCACAGGACTCCCCGGGCTTCATCTAGTGTTTGGC  600

seq1  TGTGTGTCTCTGCATCTGTTTCCATCCGCTGCTGGAAGAAGTATCTAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTCTCTGCATCTGTTTCCATCCGCTGCTGGAAGAAGTATCTAAGA  650

seq1  AGAGGGCTATGTTAGGCTCTTGTCATTCTTAAAAAAAAAAAAGTTACAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGCTATGTTAGGCTCTTGTCATTCTTAAAAAAAAAAAAGTTACAAA  700

seq1  GAGTGTCTGGGGAGGTGGCTCAGTGGCTAAGAGGGTCCTTAAGCTCAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTCTGGGGAGGTGGCTCAGTGGCTAAGAGGGTCCTTAAGCTCAAAA  750

seq1  CTGCCTATAATTCCAGC-TTCAGCAGACCCTACACCCACTTCTGGCTTCT  799
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CTGCCTATAATTCCAGCTTTCAGCAGACCCTACACCCACTTCTGGCTTCT  800

seq1  GAGTACCCATCCACACCTGGTTTGTGCATATACACAT-CCAAATAAGAAA  848
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GAGTACCCATCCACACCTGGTTTGTGCATATACACATCCCAAATAAGAAA  850

seq1  AAAAATGAAGGTAAAGTTTTCTTTTC-TTTTTTTTTTTTTTTGGTTTTTC  897
      |||||||||||||||||||||||||| ||||||||||||||||| |||||
seq2  AAAAATGAAGGTAAAGTTTTCTTTTCTTTTTTTTTTTTTTTTGGGTTTTC  900

seq1  TTTTTTT--CTGTT-CTTTTGTTTGTTTGCTTGTTTGTTTTTCGAGG--C  942
      |||||||  | ||| |||| ||||||||||||| | | |||||||||   
seq2  TTTTTTTTCCGGTTCCTTTGGTTTGTTTGCTTGATAGATTTTCGAGGGCA  950

seq1  AGGGTTT-CTC-TGTA--TAGCCCTGGCTGTCCTGGAA  976
      ||||||| ||| ||||   |||||||||||| ||||||
seq2  AGGGTTTCCTCTTGTAATAAGCCCTGGCTGTTCTGGAA  988