BAC Information

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BAC

Clone NameB6Ng01-246M05
Chromosome4 (Build37)
Map Location 72,360,283 - 72,514,805
singlet/doubletdoublet
Overlap geneAldoa-ps2
Upstream geneEG667649, Tle1
Downstream geneEG384113, LOC667713, LOC100039698, OTTMUSG00000001246, LOC100039726, LOC667722, LOC623115, OTTMUSG00000000281, OTTMUSG00000000280, OTTMUSG00000000282, OTTMUSG00000000283, Gm428, Rasef, LOC667768
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-246M05.bB6Ng01-246M05.g
ACCGA055287GA055288
length7871,143
definitionB6Ng01-246M05.b B6Ng01-246M05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,514,020 - 72,514,805)(72,360,283 - 72,361,448)
sequence
gaattcagttgaattaagtatctttaggaatctgaggatggacagtaaaa
caaagccttatgcaatggagagcaaggtgggttgatcatttgtaccctga
ccacagtggtctttgtcctagacctctacttacatttacacttacattgt
cttattcttattcctggagaacagcaggaagttcccaaatgttgcccttc
tggacttatatcttcaatgagcctataaattcccaatatagagtcctgag
tttttgagtttgtatccaagttacaaataattttctggggcccatggtaa
ttctcaaggtgacctgttgctttgcccaggaagaggggaggaatttgaag
atttagacatgctggaattaccttccttttgttcaaaatgattgatggta
agaatatttgaaagatggttcctcataaacaaatgttaatatccccagtg
agtctccattggtaagaactagctttttgtttgtaagtagatgtcagttg
gagattgcttcttggttaggactaggagcttttgtctacttccccctctc
agcactgggatcctttcagagtcaaacctgtgccaactttgtgtatgctg
ccacagtctctgtgactatgttcatatgtgcattagagctgctgtgtaag
attggaaaagaggggagagaggcttctcagcatttgctcatgctcaaaga
tggaatacttctggcttaattcttttctcaaggtaccagtagaggttttt
ccatcttccttcctccctccgtccctccctccctccg

gaattcaaatagagcaggatcctttatacaggaactgatgcaaaggtgat
ggaggggtgcttcttactggcttgctctccatagcttgctcagccctcct
tcttataccattcaggaccacctgcctagacatgaaaatgtgctcaatgt
gctggaccctcatccataaatcactaattaagaaaatgtcttacagccag
atcttatggtggaatttcctcaatgagactccctcctttttaataactct
agttgtgtgtcaagttcacataagactagccagcacatgcactttaagta
attttttctttctctttggccaggaagatcatgttactttctctatttgc
atgcttcaaaaccaataataataataactattattattattatctttttt
cctcctccttctcctccccttccttcttccttctccttcacttctacttc
ttttccttcttctttaatctgttgagatttttgagtatttcacatttgca
tattgccattatatcatatccccctctccttctcctccctccaattcctt
tcaggcttcttcccccaactgtctctcagtccagagtggacacatatgat
aaaagattaatatccagaatatagaagtaactcaaaaataaagggaaaag
aaacaaaatactcaattaaaaagtgggctatggatttttttcttagatac
ttttctactggtattatgagacaccatgactaaagcaatttataatagaa
aaaaattttgtttgggtttatctttttagagagttagtctagaactttca
aagagtgagcctggaagtaagccactgctacttgataactgtaattttcc
tactgttatgaattgctatgtacatacttattccctgatagtcctaggta
gcccctgtgatagagtcatttgaacaactaaaggaatcacgacttatagg
ttgaagaactgttgttcttaaatagtcatggtcataaaaagcttctttaa
atttatggcctacatattcattcaagagacctgactcaagtatcttaggt
agaatattaattttcttgagcctttccttacatttcctaaaaggtgtgta
aatttcttacttactgaactcatctcaggttaatggaaagttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_72514020_72514805
seq2: B6Ng01-246M05.b_49_835 (reverse)

seq1  CGGAGGGAGGGAGGGACGGAGGGAGGAAGGAAGATGG-AAAACCTCTACT  49
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CGGAGGGAGGGAGGGACGGAGGGAGGAAGGAAGATGGAAAAACCTCTACT  50

seq1  GGTACCTTGAGAAAAGAATTAAGCCAGAAGTATTCCATCTTTGAGCATGA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACCTTGAGAAAAGAATTAAGCCAGAAGTATTCCATCTTTGAGCATGA  100

seq1  GCAAATGCTGAGAAGCCTCTCTCCCCTCTTTTCCAATCTTACACAGCAGC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATGCTGAGAAGCCTCTCTCCCCTCTTTTCCAATCTTACACAGCAGC  150

seq1  TCTAATGCACATATGAACATAGTCACAGAGACTGTGGCAGCATACACAAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATGCACATATGAACATAGTCACAGAGACTGTGGCAGCATACACAAA  200

seq1  GTTGGCACAGGTTTGACTCTGAAAGGATCCCAGTGCTGAGAGGGGGAAGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCACAGGTTTGACTCTGAAAGGATCCCAGTGCTGAGAGGGGGAAGT  250

seq1  AGACAAAAGCTCCTAGTCCTAACCAAGAAGCAATCTCCAACTGACATCTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAAAGCTCCTAGTCCTAACCAAGAAGCAATCTCCAACTGACATCTA  300

seq1  CTTACAAACAAAAAGCTAGTTCTTACCAATGGAGACTCACTGGGGATATT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAAACAAAAAGCTAGTTCTTACCAATGGAGACTCACTGGGGATATT  350

seq1  AACATTTGTTTATGAGGAACCATCTTTCAAATATTCTTACCATCAATCAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTGTTTATGAGGAACCATCTTTCAAATATTCTTACCATCAATCAT  400

seq1  TTTGAACAAAAGGAAGGTAATTCCAGCATGTCTAAATCTTCAAATTCCTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAACAAAAGGAAGGTAATTCCAGCATGTCTAAATCTTCAAATTCCTC  450

seq1  CCCTCTTCCTGGGCAAAGCAACAGGTCACCTTGAGAATTACCATGGGCCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTTCCTGGGCAAAGCAACAGGTCACCTTGAGAATTACCATGGGCCC  500

seq1  CAGAAAATTATTTGTAACTTGGATACAAACTCAAAAACTCAGGACTCTAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAATTATTTGTAACTTGGATACAAACTCAAAAACTCAGGACTCTAT  550

seq1  ATTGGGAATTTATAGGCTCATTGAAGATATAAGTCCAGAAGGGCAACATT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGAATTTATAGGCTCATTGAAGATATAAGTCCAGAAGGGCAACATT  600

seq1  TGGGAACTTCCTGCTGTTCTCCAGGAATAAGAATAAGACAATGTAAGTGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAACTTCCTGCTGTTCTCCAGGAATAAGAATAAGACAATGTAAGTGT  650

seq1  AAATGTAAGTAGAGGTCTAGGACAAAGACCACTGTGGTCAGGGTACAAAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTAAGTAGAGGTCTAGGACAAAGACCACTGTGGTCAGGGTACAAAT  700

seq1  GATCAACCCACCTTGCTCTCCATTGCATAAGGCTTTGTTTTACTGTCCAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAACCCACCTTGCTCTCCATTGCATAAGGCTTTGTTTTACTGTCCAT  750

seq1  CCTCAGATTCCTAAAGATACTTAATTCAACTGAATTC  786
      |||||||||||||||||||||||||||||||||||||
seq2  CCTCAGATTCCTAAAGATACTTAATTCAACTGAATTC  787


seq1: chr4_72360283_72361448
seq2: B6Ng01-246M05.g_66_1208

seq1  GAATTCAAATAGAGCAGGATCCTTTATACAGGAACTGATGCAAAGGTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATAGAGCAGGATCCTTTATACAGGAACTGATGCAAAGGTGAT  50

seq1  GGAGGGGTGCTTCTTACTGGCTTGCTCTCCATAGCTTGCTCAGCCCTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGGTGCTTCTTACTGGCTTGCTCTCCATAGCTTGCTCAGCCCTCCT  100

seq1  TCTTATACCATTCAGGACCACCTGCCTAGACATGAAAATGTGCTCAATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATACCATTCAGGACCACCTGCCTAGACATGAAAATGTGCTCAATGT  150

seq1  GCTGGACCCTCATCCATAAATCACTAATTAAGAAAATGTCTTACAGCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGACCCTCATCCATAAATCACTAATTAAGAAAATGTCTTACAGCCAG  200

seq1  ATCTTATGGTGGAATTTCCTCAATGAGACTCCCTCCTTTTTAATAACTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTATGGTGGAATTTCCTCAATGAGACTCCCTCCTTTTTAATAACTCT  250

seq1  AGTTGTGTGTCAAGTTCACATAAGACTAGCCAGCACATGCACTTTAAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTGTGTCAAGTTCACATAAGACTAGCCAGCACATGCACTTTAAGTA  300

seq1  ATTTTTTCTTTCTCTTTGGCCAGGAAGATCATGTTACTTTCTCTATTTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTCTTTCTCTTTGGCCAGGAAGATCATGTTACTTTCTCTATTTGC  350

seq1  ATGCTTCAAAACCAATAATAATAATAACTATTATTATTATTATCTTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTCAAAACCAATAATAATAATAACTATTATTATTATTATCTTTTTT  400

seq1  CCTCCTCCTTCTCCTCCCCTTCCTTCTTCCTTCTCCTTCACTTCTACTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCCTTCTCCTCCCCTTCCTTCTTCCTTCTCCTTCACTTCTACTTC  450

seq1  TTTTCCTTCTTCTTTAATCTGTTGAGATTTTTGAGTATTTCACATTTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTTCTTCTTTAATCTGTTGAGATTTTTGAGTATTTCACATTTGCA  500

seq1  TATTGCCATTATATCATATCCCCCTCTCCTTCTCCTCCCTCCAATTCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCCATTATATCATATCCCCCTCTCCTTCTCCTCCCTCCAATTCCTT  550

seq1  TCAGGCTTCTTCCCCCAACTGTCTCTCAGTCCAGAGTGGACACATATGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCTTCTTCCCCCAACTGTCTCTCAGTCCAGAGTGGACACATATGAT  600

seq1  AAAAGATTAATATCCAGAATATAGAAGTAACTCAAAAATAAAGGGAAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATTAATATCCAGAATATAGAAGTAACTCAAAAATAAAGGGAAAAG  650

seq1  AAACAAAATACTCAATTAAAAAGTGGGCTATGGATTTTTTTCTTAGATAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAATACTCAATTAAAAAGTGGGCTATGGATTTTTTTCTTAGATAC  700

seq1  TTTTCTACTGGTATTATGAGACACCATGACTAAAGCAATTTATAATAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTACTGGTATTATGAGACACCATGACTAAAGCAATTTATAATAGAA  750

seq1  AAAAATTTTGTTTGGGTTTATCTTTTTAGAGAGTTAGTCTAGAACTTTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTTTGTTTGGGTTTATCTTTTTAGAGAGTTAGTCTAGAACTTTCA  800

seq1  AAGAGTGAGCCTGGAAGTAAGCCACTGCTACTTGATAACTGTAATTTTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTGAGCCTGGAAGTAAGCCACTGCTACTTGATAACTGTAATTTTCC  850

seq1  TACTGTTATGAATTGCTATGTACATACTTATTTCCTGATAGTCCTAGGTA  900
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TACTGTTATGAATTGCTATGTACATACTTATTCCCTGATAGTCCTAGGTA  900

seq1  GCCCCTGTGATAGAGTCATTTGAACAACTAAAGGAATCAGGACCTATAGG  950
      ||||||||||||||||||||||||||||||||||||||| ||| ||||||
seq2  GCCCCTGTGATAGAGTCATTTGAACAACTAAAGGAATCACGACTTATAGG  950

seq1  TTG-AGAACTGTTGTTC-TAAATAGTCATGGTCATAAAAAGCTTCTTTAA  998
      ||| ||||||||||||| |||||||||||||||||||||||||||||| |
seq2  TTGAAGAACTGTTGTTCTTAAATAGTCATGGTCATAAAAAGCTTCTTT-A  999

seq1  AATTTATGGCCTACATAATCATTTCCAAGAGACCTGACTCAAAGTATCTT  1048
      ||||||||||||||||| |||||  ||||||||||||||| |||||||||
seq2  AATTTATGGCCTACATATTCATT--CAAGAGACCTGACTC-AAGTATCTT  1046

seq1  AGGTAGAATATTAA-TTTCTTGAGGCTTT-CTTACATTTCTTAAAA-GTG  1095
      |||||||||||||| ||||||||| |||| |||||||||| ||||| |||
seq2  AGGTAGAATATTAATTTTCTTGAGCCTTTCCTTACATTTCCTAAAAGGTG  1096

seq1  TGTAAATTTCTTTACTTACTGAAATTAATCTCAGGTGTAATGAAAAATTT  1145
      |||||||||| |||||||||| || | ||||||||| |||||        
seq2  TGTAAATTTC-TTACTTACTG-AACTCATCTCAGGT-TAATG--------  1135

seq1  GCAAGGGAAACGAGAAAGTTG  1166
                   ||||||||
seq2  -------------GAAAGTTG  1143


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