BAC Information

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BAC

Clone NameB6Ng01-247I22
Chromosome4 (Build37)4 (Build37)
Map Location 145,571,921 - 145,573,077145,481,735 - 145,482,180
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneVps13d, Tnfrsf1b, Tnfrsf8, LOC666282, 9230115A19Rik, LOC195576, LOC622846, LOC666314, LOC545701, OTTMUSG00000010965, LOC666334, LOC545703, LOC384081, LOC100041379, LOC666349, LOC666351, LOC545704, 1700029I01Rik, LOC236069, LOC384084
Downstream geneLOC666386, LOC666390, LOC100041433, LOC433790, LOC433791, Rex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-247I22.bB6Ng01-247I22.g
ACCGA055861GA055862
length1,163438
definitionB6Ng01-247I22.b B6Ng01-247I22.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(145,571,921 - 145,573,077)(145,481,735 - 145,482,180)
sequence
gaattctctacttcatgttccctgtgccttccatcctctgtgtgtctgtt
cagttagtttaaatctctaacttcctgaaggctaccttgtgtatatctcc
ctttctgtctgccttttgtctccatgtttgtgtctatctgagtaatctgt
tgtttgtttgtatctctctggctgggcataagagagagctttggagtgtt
tctagaacattaagggaaccatcacgtggggaaagaatgggacagtgaac
agtaatctttaacagagttttataaaggattaggtaactggctgtgaggt
ccaggaaaattctccatctattagaaggtaagatcttttatataatatat
tgtcacactcatggttctgccaatgcataggaaaggaccacggagcaaga
ctccatggagttctgttggatacattcttagtaagatatctgcaaaaaaa
aatttttttttgaaaagtaccactttataagtgtatgaagatggtttaaa
tgaagtctttgaatactgaaagagatggagttccagttgatcttgtcttt
tcaactgtgttacatcaagaaagttgctagccaaagtgatctcataaaaa
tacccagagaatgcaggccactgacaacaaaaggggttgcttttcacaaa
ctgacagtaagtcttcattgctaaagacagggctgacacaaaacactgta
tatgaaaagggcaaactggtgccagtaagaacattgactcttatattcca
gtgtcctcattagggaagatgctttgaaaggtacacaaagtaaaatatat
acacagaaccaaccaaaaagacgttgatctataatttttccttttcagaa
aatatgcttagggcaatgatgtcatgaatttactgggaataaccaatcaa
tgtctaatttgacttgaataccaaaagcactttggttaatgttatatatc
tatatacacaagtgtgtgtggacatgagttagggttacacctgccacagt
gtttgattgctgggatatgccagcagcactttccatgtttatgttctata
aagtcagcaattgtatcacacttgtaatatcctcaacaaccataaattta
tatttctagaaaacatcctttgaattgcctttgccatttacactaaccac
acattaaacatcc
tctggaatttcattaagtttgtttctgccttcttgaattcctgtgcttgt
tccctctttatgacatttgtccacattgaatggtgttcagattatgtttt
gacttttgtctcttgagtttgtttcataattcattttgtcatgagaattg
gtattggtttagtgatttaggttagggaaattttattaacattgtcaaat
tgctttagctacagcctctcaattttcttttactgtgtgtcatttaggtc
aggtgacagggatttccatatgaggtgttgtgaataaactttgagaatct
agggtggtgggaggaactaggttacagttacagtctaaatttatcattgc
ttactttcatgactgcactttgtcaagattcctggtatcattttgctttt
aatgtttatatgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_145571921_145573077
seq2: B6Ng01-247I22.b_46_1208

seq1  GAATTCTCTACTTCATGTTCCCTGTGCCTTCCATCCTCTGTGTGTCTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTACTTCATGTTCCCTGTGCCTTCCATCCTCTGTGTGTCTGTT  50

seq1  CAGTTAGTTTAAATCTGTAACTTCCTGAAGGCTACCTTGTGTATATCTCC  100
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CAGTTAGTTTAAATCTCTAACTTCCTGAAGGCTACCTTGTGTATATCTCC  100

seq1  CTTTCTGTCTGCCTTTTGTCTCCATGTTTGTGTCTATCTGAGTAATCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGTCTGCCTTTTGTCTCCATGTTTGTGTCTATCTGAGTAATCTGT  150

seq1  TGTTTGTTTGTATCTCTCTGGCTGGGCATAAGAGAGAGCTTTGGAGTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTTTGTATCTCTCTGGCTGGGCATAAGAGAGAGCTTTGGAGTGTT  200

seq1  TCTAGAACATTAAGGGAACCATCACGTGGGGAAAGAATGGGACAGTGAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAACATTAAGGGAACCATCACGTGGGGAAAGAATGGGACAGTGAAC  250

seq1  AGTAATCTTTAACAGAGTTTTATAAAGGATTAGGTAACTGGCTGTGAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATCTTTAACAGAGTTTTATAAAGGATTAGGTAACTGGCTGTGAGGT  300

seq1  CCAGGAAAATTCTCCATCTATTAGAAGGTAAGATCTTTTATATAATATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAAAATTCTCCATCTATTAGAAGGTAAGATCTTTTATATAATATAT  350

seq1  TGTCACACTCATGGTTCTGCCAATGCATAGGAAAGGACCACGGAGCAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACACTCATGGTTCTGCCAATGCATAGGAAAGGACCACGGAGCAAGA  400

seq1  CTCCATGGAGTTCTGTTGGATACATTCTTAGTAAGATATCTGCAAAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATGGAGTTCTGTTGGATACATTCTTAGTAAGATATCTGCAAAAAAA  450

seq1  AA-TTTTTTTTGAAAAGTACCACTTTATAAGTGTATGAAGATGGTTTAAA  499
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTTTTTGAAAAGTACCACTTTATAAGTGTATGAAGATGGTTTAAA  500

seq1  TGAAGTCTTTGAATACTGAAAGAGATGGAGTTCCAGTTGATCTTGTCTTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTCTTTGAATACTGAAAGAGATGGAGTTCCAGTTGATCTTGTCTTT  550

seq1  TCAACTGTGTTACATCAAGAAAGTTGCTAGCCAAAGTGATCTCATAAAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTGTGTTACATCAAGAAAGTTGCTAGCCAAAGTGATCTCATAAAAA  600

seq1  TACCCAGAGAATGCAGGCCACTGACAACAAAAGGGGTTGCTTTTCACAAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCAGAGAATGCAGGCCACTGACAACAAAAGGGGTTGCTTTTCACAAA  650

seq1  CTGACAATAAGTCTTCATTGCTAAAGACAGGGCTGACACAAAACACTGTA  699
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAGTAAGTCTTCATTGCTAAAGACAGGGCTGACACAAAACACTGTA  700

seq1  TATGAAAAGGGCAAACTGGTGCCAGTAAGAACATTGACTCTTATATTCCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAAAGGGCAAACTGGTGCCAGTAAGAACATTGACTCTTATATTCCA  750

seq1  GTGTCCTCATTAGGGAAGATGCTTTGAAAGGTACACAAAGTAAAATATAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCTCATTAGGGAAGATGCTTTGAAAGGTACACAAAGTAAAATATAT  800

seq1  ACACAGAACCAACCAAAAAGACGTTGATCTATAATTTTTCCTTTTCAGAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAACCAACCAAAAAGACGTTGATCTATAATTTTTCCTTTTCAGAA  850

seq1  AATATGCTTAGGGCAATGATGTCATGAATTTACTGGGAATAACCAATCAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGCTTAGGGCAATGATGTCATGAATTTACTGGGAATAACCAATCAA  900

seq1  TGTCTAATTTGACTTGAATACCAAAAGCACTTTGGTTAAATGTTATATAT  949
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TGTCTAATTTGACTTGAATACCAAAAGCACTTTGGTT-AATGTTATATAT  949

seq1  CTATATACACAAGTGTGTGTGGACATGAGTTAGGGTTACACCTGCCACAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATACACAAGTGTGTGTGGACATGAGTTAGGGTTACACCTGCCACAG  999

seq1  TGTTTGATTGCTGGAATTATGCCAGCAGCAC-TTCCATGTTTTATG-TCT  1047
      |||||||||||||| | |||||||||||||| ||||||| |||||| |||
seq2  TGTTTGATTGCTGGGA-TATGCCAGCAGCACTTTCCATG-TTTATGTTCT  1047

seq1  ATAAAGTCAAGCAATGTAATCACACTTTGTATAT-CTCAACAA-CAT-AA  1094
      |||||||| ||||||   |||||||||   |||| |||||||| ||| ||
seq2  ATAAAGTC-AGCAATTGTATCACACTTGTAATATCCTCAACAACCATAAA  1096

seq1  TTTATA-TTCTAGAAAACATCTTTTG-ATTGTCTTT-CCATTTACACTAA  1141
      |||||| |||||||||||||| |||| |||| |||| |||||||||||||
seq2  TTTATATTTCTAGAAAACATCCTTTGAATTGCCTTTGCCATTTACACTAA  1146

seq1  CACAACATT-AACATCC  1157
      |   ||||| |||||||
seq2  CCACACATTAAACATCC  1163

seq1: chr4_145481735_145482180
seq2: B6Ng01-247I22.g_71_514

seq1  GAATTCTCTGGAATTTCATTAAGTTTGTTTCTGCCTTCTTGAATTCCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGGAATTTCATTAAGTTTGTTTCTGCCTTCTTGAATTCCTGT  50

seq1  GCTTGTTCCCTCTTTATGACATTTGTCCACATTGAATGGTGTTCATATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GCTTGTTCCCTCTTTATGACATTTGTCCACATTGAATGGTGTTCAGATTA  100

seq1  TGTTTTGACTTTTGTCTCTTGAGTTTGTTTCATAATTCATTTTGTCATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGACTTTTGTCTCTTGAGTTTGTTTCATAATTCATTTTGTCATGA  150

seq1  GAATTGGTATTGGTTTAGTGATTTAGGTTAGGGAAATTTTATTAACATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGGTATTGGTTTAGTGATTTAGGTTAGGGAAATTTTATTAACATTG  200

seq1  TCAAATTGCTTTAGCTACAGCCTCTCAATTTTCTTTTGCTGTGTGTCATT  250
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TCAAATTGCTTTAGCTACAGCCTCTCAATTTTCTTTTACTGTGTGTCATT  250

seq1  TAGGTCAGGTGACAGGGATTTCCATATGAGGTGTTGTGAATAAACTTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTCAGGTGACAGGGATTTCCATATGAGGTGTTGTGAATAAACTTTGA  300

seq1  GAATCTAGGGTGGTGGGAGGAACTAGGTTACAGTTACAGTCTAAATATAT  350
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GAATCTAGGGTGGTGGGAGGAACTAGGTTACAGTTACAGTCTAAATTTAT  350

seq1  CATTGCTTACTTTCATGACTGCACTTTGTCAAGATTCCTGGTATCATTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCTTACTTTCATGACTGCACTTTGTCAAGATTCCTGGTATCATTTT  400

seq1  GCTTTTAATGTTTATATGTGTGTGTGTGTGTGTGTGTGTCTGTGTG  446
      ||||||||||||||||||||||||||||||||||||||| ||||  
seq2  GCTTTTAATGTTTATATGTGTGTGTGTGTGTGTGTGTGTGTGTG--  444