BAC Information

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BAC

Clone NameB6Ng01-248A20
Chromosome4 (Build37)
Map Location 80,085,768 - 80,086,477
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneTyrp1, D4Bwg0951e, Mpdz
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-248A20.bB6Ng01-248A20.g
ACCGA056225GA056226
length1,088917
definitionB6Ng01-248A20.b B6Ng01-248A20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgtctttatattcatttatgtggttcagtatattgactttcac
atccagaaatattcctgcatttcaaggaaaaggccaacatgatcatagtg
gttaatcttttttgatgcctgttttcactttctaattactttattgagaa
ttttgtcatctatgttcataatgcatcttaatctacacttttcctggact
agcaattagagccactggagccataggaagggtttggaatggtcttcatg
tttcttttttttttttttaattacatatagatctttgtggaaaatcttgt
agaattctaatgtgaatccacatagacaagggcttgttttagttggaaac
ctttgtattaatgttttatttttgttcttacaagtatttttaggttgcca
gtagatcagaatctacttgtgatttaagtctgttagattagataactcca
gaaatttatccatttccttaagcttttcaaattaataaggtacagctttg
taagcaaactcttataagattctgaattatttttgtaatgttttgtggct
catttctgactctaaattttactcctctctttcttttggtaagtttggcc
aaatgcctgttagtattctttactttcacaaagaagcatctcttagatcc
attgactctttgcattgttttcttcattatattttcttaatttcttccct
gctttaataatctcttacttgctagggatttggggtttgatttgttactt
ttttgtacttcctagagatatgtttggtgttgaatttagttttattgcat
tattatcatatagaacacagagagtgattttcagtctctctgaacttgtt
aagtcctgttttgtggtagaggaagcctgtttcctcagccccacccaagg
gccttgtactcctgctcctgctgggccactacatctggttacaaacaggg
ttcagataaccaccctgggagggtcacactttagagatctgcaattgtta
ttgcatagtatcttacattgttcctcgaagtagtgctgacctactgggtg
aaattgacaggttttgccagtacgactgcaattgaaga
gaattctcacctgaggaataccaaatgcctgagaagcacctgaaaaaatg
ttcagcatccttaatcatcagagaaatgcaaatcaaaacagccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccatcgttgatg
gaattgcaaacttgtacaaccactctggaaataagtctggcggttcctca
gaaaatcggacacagtaatactggaggatcccataatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggatacatgctccactat
gttcatagcagccttatttataatagccagaagatggtaagaacccagat
gcccctcaacagaggaatggatacaaaaaaatgtggtacatttacacaat
ggagtactactcagctattaaaagtaattaatttatgaaattcctaggca
aatagttggacctggagggcatcatccttagtgaggtaaccccatcacaa
aagagctcacatgttatgtactcactcataagtggatattagccgagaag
cttagtatacctgagatataagatacaatttgccaaacacatgaaactga
agaagaatgaagaccaaagtgtggacactttgccccttcttagaattggg
aacaatcacccatggaaggagttacagagacaaagtttggagctgagaca
aaaggatggaccatctagagactgccatatccagggatcaatcccataat
tagcctccaaacaatgacaccattgcatacactagcaagcattggctgaa
aggaccctgatatagctgttgcttgtgagactaggctggggcctagcaaa
cacagaagtggatgctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_80085768_80086477
seq2: B6Ng01-248A20.b_411_1132

seq1  TATTTTTGTTCTTACAAGTATTTTTAGGTTGCCAGTAGATCAGAATCTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTGTTCTTACAAGTATTTTTAGGTTGCCAGTAGATCAGAATCTAC  50

seq1  TTGTGATTTAAGTCTGTTAGATTAGATAACTCCAGAAATTTATCCATTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGATTTAAGTCTGTTAGATTAGATAACTCCAGAAATTTATCCATTTC  100

seq1  CTTAAGCTTTTCAAATTAATAAGGTACAGCTTTGTAAGCAAACTCTTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGCTTTTCAAATTAATAAGGTACAGCTTTGTAAGCAAACTCTTATA  150

seq1  AGATTCTGAATTATTTTTGTAATGTTTTGTGGCTCATTTCTGACTCTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCTGAATTATTTTTGTAATGTTTTGTGGCTCATTTCTGACTCTAAA  200

seq1  TTTTACTCCTCTCTTTCTTTTGGTAAGTTTGGCCAAATGCCTGTTAGTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACTCCTCTCTTTCTTTTGGTAAGTTTGGCCAAATGCCTGTTAGTAT  250

seq1  TCTTTACTTTCACAAAGAAGCATCTCTTAGATCCATTGACTCTTTGCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTACTTTCACAAAGAAGCATCTCTTAGATCCATTGACTCTTTGCATT  300

seq1  GTTTTCTTCATTATATTTTCTTAATTTCTTCCCTGCTTTAATAATCTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTTCATTATATTTTCTTAATTTCTTCCCTGCTTTAATAATCTCTT  350

seq1  ACTTGCTAGGGATTTGGGGTTTGATTTGTTAC-TTTTTGTACTTCCTAGA  399
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ACTTGCTAGGGATTTGGGGTTTGATTTGTTACTTTTTTGTACTTCCTAGA  400

seq1  GATATGTTTGGTGTTGAATTTAGTTTTATTGCATTATTATCATATAGAAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGTTTGGTGTTGAATTTAGTTTTATTGCATTATTATCATATAGAAC  450

seq1  ACAGAGAGTGA-TTTCAGTCTCTCTGAACTTGTTAAGTCCTGTTTTGTGG  498
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAGTGATTTTCAGTCTCTCTGAACTTGTTAAGTCCTGTTTTGTGG  500

seq1  TAGAGGAAGCCTG-TTCCTCAGCCCCACCC-AGGGCC-TGTACTCCTGCT  545
      ||||||||||||| |||||||||||||||| |||||| ||||||||||||
seq2  TAGAGGAAGCCTGTTTCCTCAGCCCCACCCAAGGGCCTTGTACTCCTGCT  550

seq1  CCTGCT-GGCCACTACATCTGGTTACAAACA-GGTCCAGATAACCACC--  591
      |||||| |||||||||||||||||||||||| ||| ||||||||||||  
seq2  CCTGCTGGGCCACTACATCTGGTTACAAACAGGGTTCAGATAACCACCCT  600

seq1  TGGAGGGTCACACTTAAGAGAATCTGCAA-TGTTA-TGCATAGTATC-TA  638
       |||||||||||||| |||| |||||||| ||||| ||||||||||| ||
seq2  GGGAGGGTCACACTTTAGAG-ATCTGCAATTGTTATTGCATAGTATCTTA  649

seq1  CA-TGTTCCTCGAGGTAGTGCTGGACCTACTGGGTGAAAATGACAGGTTT  687
      || |||||||||| |||||||| |||||||||||||||| ||||||||||
seq2  CATTGTTCCTCGAAGTAGTGCT-GACCTACTGGGTGAAATTGACAGGTTT  698

seq1  TGCCAGTACGACTGC-AGTGAAGA  710
      ||||||||||||||| | ||||||
seq2  TGCCAGTACGACTGCAATTGAAGA  722