BAC Information

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BAC

Clone NameB6Ng01-249B19
Chromosome4 (Build37)
Map Location 45,154,940 - 45,267,824
singlet/doubletdoublet
Overlap geneFrmpd1
Upstream geneRnf38, Melk, Pax5, 5730488B01Rik, LOC545618, Zcchc7, D4Wsu132e, Grhpr, Zbtb5, 1700055D18Rik, Polr1e, Fbxo10, 1110019J04Rik
Downstream geneRg9mtd3, Exosc3, LOC666325, Wdr32, Mcart1, Shb, LOC100040140, LOC100040557, Gm829, LOC100040567, LOC100040580, Aldh1b1, Igfbpl1, 1300002K09Rik, Tdrd7, Tmod1, BC057893, AU014645, Xpa, LOC624430
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-249B19.bB6Ng01-249B19.g
ACCGA057014GA057015
length4161,160
definitionB6Ng01-249B19.b B6Ng01-249B19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(45,154,940 - 45,155,361)(45,266,639 - 45,267,824)
sequence
atttaggggaaaaaactgctccaaggaacagctctaggctcctgctggag
gttcatgagggcagcaacttcaagctgtcaaacagggaaagaacggacag
accctggcagaagagagactgggtaggggctatagcgatttctaagctca
gggaggaagctcctgccaaagatgtcaaagataggggatcttcaatgact
tgggagccatacgcagtttgaccatcttagtgtgttttgtgttgctgtgc
taggatatcatagacttggtcacttataaagaaaattaatttacttctta
tagtcccggaagttgagaaatgcaaggttgagggcttgcctctggtgagg
atctgcaggcttctgcatcatgagagtcagcacacagtggcagcaggggg
aggggaggggagggct
gaattccttccttcttgcaaagaatttaataatctctcccacaatccccc
tgcggagaaagctgcatgcagagccagtaggtggattcagcaatggttta
atctgcactcaaaatagttctggtttcttttctctttttcttttcctgtc
ctttcctgtgcgagggatcaaacccagggcctcattcctgttaagacaag
ggagttgccactgagttaagtagcttaagctccctctggctgaaccctta
tggttgatatctagcaatgcctgagatgaaggcagaggaagaaatttata
ggcagaactgtaagaggccatcaggtgccaagcaacagatattgaacaag
atccttgcgaatcagaagctctgagtcagaggctgggaaaaccaagagca
agtctaagagagcacagggggcggggctgtcaacacagcacagcgacaga
gtggagagtgagagagtgttcacagcaataggcaaccagtcactcagagg
atagagcaaccaagggcagagcagaagagagacacagagagcaggcattt
ccagcaacccatccctgtttctcatgctagggagggcaatcccctgagcg
ttcggctgagagctgaaacgttaaagaaaattagctggctgagaactaga
aaggaaggagctctgagaagaggaggctccttgacaagaaaggaggctga
tgatagctggcatctatacaaatacgcctttcagcctcaggactataaaa
gcacagcaggccaaaacaccgggccaagctacatgacctgacatggatta
ataggaagagtgactctgaggatttaaaaaaaaaaaaaaaatcaattggc
caagcaagggatggggggactcagcctggaagctattcatttgaaaaccg
gctcagtatttcactgaccacaagtatcacccaagccaacagtgtgactg
gccttgccaagttggaatccaaccctgagctccacagcatttctggtgca
cacagagcaaccctcatccgggccactcttttggtgagtgtgacttctgg
tgcaacatttgcagttcacgaaattatagtcaatccgacccatggcaagt
tgggaagttagatacttcagctgaagtggagagccatgctgtcgaatctc
gagagtagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_45154940_45155361
seq2: B6Ng01-249B19.b_44_465

seq1  GAATTCATTTAGGGGAAAAAACTGCTCCAAGGAACAGCTCTAGGCTCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTAGGGGAAAAAACTGCTCCAAGGAACAGCTCTAGGCTCCTG  50

seq1  CTGGAGGTTCATGAGGGCAGCAACTTCAAGCTGTCAAACAGGGAAAGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGGTTCATGAGGGCAGCAACTTCAAGCTGTCAAACAGGGAAAGAAC  100

seq1  GGACAGACCCTGGCAGAAGAGAGACTGGGTAGGGGCTATAGCGATTTCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGACCCTGGCAGAAGAGAGACTGGGTAGGGGCTATAGCGATTTCTA  150

seq1  AGCTCAGGGAGGAAGCTCCTGCCAAAGATGTCAAAGATAGGGGATCTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCAGGGAGGAAGCTCCTGCCAAAGATGTCAAAGATAGGGGATCTTCA  200

seq1  ATGACTTGGGAGCCATACGCAGTTTGACCATCTTAGTGTGTTTTGTGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTTGGGAGCCATACGCAGTTTGACCATCTTAGTGTGTTTTGTGTTG  250

seq1  CTGTGCTAGGATATCATAGACTTGGTCACTTATAAAGAAAATTAATTTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCTAGGATATCATAGACTTGGTCACTTATAAAGAAAATTAATTTAC  300

seq1  TTCTTATAGTCCCGGAAGTTGAGAAATGCAAGGTTGAGGGCTTGCCTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATAGTCCCGGAAGTTGAGAAATGCAAGGTTGAGGGCTTGCCTCTG  350

seq1  GTGAGGATCTGCAGGCTTCTGCATCATGAGAGTCAGCACACAGTGGCAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGATCTGCAGGCTTCTGCATCATGAGAGTCAGCACACAGTGGCAGC  400

seq1  AGGGGGAGGGGAGGGGAGGGCT  422
      ||||||||||||||||||||||
seq2  AGGGGGAGGGGAGGGGAGGGCT  422

seq1: chr4_45266639_45267824
seq2: B6Ng01-249B19.g_68_1227 (reverse)

seq1  AGCTACTCT-GAGATCTGACAGCATGGCTCTCCCAACTTCCAGCTGAAGT  49
      ||||||||| |||||  ||||||||||||||||  |||| ||||||||||
seq2  AGCTACTCTCGAGATTCGACAGCATGGCTCTCC--ACTT-CAGCTGAAGT  47

seq1  TATTCCTCATACTTCCCACTCTGCCAATGGGTTTCTGGATGGACTATAAT  99
            ||  ||||||||   |||| ||||||    |||| |||||||||
seq2  -----ATCTAACTTCCCAACTTGCC-ATGGGT---CGGATTGACTATAAT  88

seq1  TTCGGTGACCCTTGCAAATGGTGGCACCCAGAAAGGTCCACACTTCCACC  149
      ||| |||| |  ||||||| || ||| ||||||  || ||||||  ||||
seq2  TTC-GTGAAC--TGCAAAT-GTTGCA-CCAGAA--GT-CACACT--CACC  128

seq1  CAAAGAGTGCCCCGGGAATGAAGGGTTGCTTCTGGTGTGCACCAGAAATG  199
       |||||||| |||||  ||| |||||||| ||| ||||||||||||||||
seq2  AAAAGAGTGGCCCGG--ATG-AGGGTTGC-TCT-GTGTGCACCAGAAATG  173

seq1  CTGGTGGAGCTCAGGGTTGGATTCCCACTTGGCAAGGCCAGTCACACTGT  249
      || |||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CT-GTGGAGCTCAGGGTTGGATTCCAACTTGGCAAGGCCAGTCACACTGT  222

seq1  TGGCTTGGGTGATACTTGTGGTCAGTGAAATACTGAGCCGGTTTTCAAAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTGGGTGATACTTGTGGTCAGTGAAATACTGAGCCGGTTTTCAAAT  272

seq1  GAATAGCTTCCAGGCTGAGT-CCCCCATCCCTTGCTTGGCCAATTGATTT  348
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GAATAGCTTCCAGGCTGAGTCCCCCCATCCCTTGCTTGGCCAATTGATTT  322

seq1  TTTTTTTTTTTTTAAATCCTCAGAGTCACTCTTCCTATTAATCCATGTCA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTAAATCCTCAGAGTCACTCTTCCTATTAATCCATGTCA  372

seq1  GGTCATGTAGCTTGGCCCGGTGTTTTGGCCTGCTGTGCTTTTATAGTCCT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATGTAGCTTGGCCCGGTGTTTTGGCCTGCTGTGCTTTTATAGTCCT  422

seq1  GAGGCTGAAAGGCGTATTTGTATAGATGCCAGCTATCATCAGCCTCCTTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTGAAAGGCGTATTTGTATAGATGCCAGCTATCATCAGCCTCCTTT  472

seq1  CTTGTCAAGGAGCCTCCTCTTCTCAGAGCTCCTTCCTTTCTAGTTCTCAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCAAGGAGCCTCCTCTTCTCAGAGCTCCTTCCTTTCTAGTTCTCAG  522

seq1  CCAGCTAATTTTCTTTAACGTTTCAGCTCTCAGCCGAACGCTCAGGGGAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTAATTTTCTTTAACGTTTCAGCTCTCAGCCGAACGCTCAGGGGAT  572

seq1  TGCCCTCCCTAGCATGAGAAACAGGGATGGGTTGCTGGAAATGCCTGCTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTCCCTAGCATGAGAAACAGGGATGGGTTGCTGGAAATGCCTGCTC  622

seq1  TCTGTGTCTCTCTTCTGCTCTGCCCTTGGTTGCTCTATCCTCTGAGTGAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTCTCTCTTCTGCTCTGCCCTTGGTTGCTCTATCCTCTGAGTGAC  672

seq1  TGGTTGCCTATTGCTGTGAACACTCTCTCACTCTCCACTCTGTCGCTGTG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGCCTATTGCTGTGAACACTCTCTCACTCTCCACTCTGTCGCTGTG  722

seq1  CTGTGTTGACAGCCCCGCCCCCTGTGCTCTCTTAGACTTGCTCTTGGTTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTTGACAGCCCCGCCCCCTGTGCTCTCTTAGACTTGCTCTTGGTTT  772

seq1  TCCCAGCCTCTGACTCAGAGCTTCTGATTCGCAAGGATCTTGTTCAATAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGCCTCTGACTCAGAGCTTCTGATTCGCAAGGATCTTGTTCAATAT  822

seq1  CTGTTGCTTGGCACCTGATGGCCTCTTACAGTTCTGCCTATAAATTTCTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGCTTGGCACCTGATGGCCTCTTACAGTTCTGCCTATAAATTTCTT  872

seq1  CCTCTGCCTTCATCTCAGGCATTGCTAGATATCAACCATAAGGGTTCAGC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCCTTCATCTCAGGCATTGCTAGATATCAACCATAAGGGTTCAGC  922

seq1  CAGAGGGAGCTTAAGCTACTTAACTCAGTGGCAACTCCCTTGTCTTAACA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGGAGCTTAAGCTACTTAACTCAGTGGCAACTCCCTTGTCTTAACA  972

seq1  GGAATGAGGCCCTGGGTTTGATCCCTCGCACAGGAAAGGACAGGAAAAGA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGAGGCCCTGGGTTTGATCCCTCGCACAGGAAAGGACAGGAAAAGA  1022

seq1  AAAAGAGAAAAGAAACCAGAACTATTTTGAGTGCAGATTAAACCATTGCT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGAAAAGAAACCAGAACTATTTTGAGTGCAGATTAAACCATTGCT  1072

seq1  GAATCCACCTACTGGCTCTGCATGCAGCTTTCTCCGCAGGGGGATTGTGG  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCACCTACTGGCTCTGCATGCAGCTTTCTCCGCAGGGGGATTGTGG  1122

seq1  GAGAGATTATTAAATTCTTTGCAAGAAGGAAGGAATTC  1186
      ||||||||||||||||||||||||||||||||||||||
seq2  GAGAGATTATTAAATTCTTTGCAAGAAGGAAGGAATTC  1160