BAC Information

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BAC

Clone NameB6Ng01-250B21
Chromosome4 (Build37)
Map Location 8,307,035 - 8,308,154
singlet/doubletsinglet
Overlap genenone
Upstream geneCar8, LOC100039494
Downstream geneLOC100039505, LOC100039478, Rab2, EG666752, LOC666760, Chd7, LOC666782, LOC100039584, 4933402J24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-250B21.bB6Ng01-250B21.g
ACCGA057751GA057752
length1,1181,172
definitionB6Ng01-250B21.b B6Ng01-250B21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagcaccgtatagaaaggtcacgaatttgctaccgggggcttctg
ggtagggactcttgagtactttcagattctgatatgtcttcagtagagag
tcactttggacctgtacaagacccagtgcaggatcaggtctatgctgccc
cctggtgctcatttgttttcctacatctaatttattctatatttacagtc
ttacattcaggacagatatctaaaactacaagaatcaggagggaaagatc
cagtgcagtaaagtcatagatctctatagtctctagggacctaagacaaa
tgtttttaccatgagacacaccccattttatctggaaaccagcataaata
tgtgaggaagagtacaaataacagatccaataactttaagttgtttttga
cagtaaatgattaaaagtgtttctgtttaatatgtcttaacttttaatca
ggatttattttatattccagtaaactttactttttatgtagatcagaggg
ggaaataatgcaacattttcaggcacatgtatgcacatgcatgtgtacat
atatgtatatagctttgtgtgtgtgtatgtgtgtgtgaacagatgagtgc
atccatgcatgaacatgtagaggccagaggatgacattaatgtcttctat
ttttcttctttagtctcttaagactgagtgtctcatggaacctagagctt
gctgggtttgagcaagccataaggcacttctcccagctggcacttgcgtt
acaggtgcctgagatgctcagggctttttatgtgggtgctggaagatcca
gaccgaagtcttcatgcatgtggactcttgtccactgagaatcctttcag
ctctggtatatcttaaatttgtatttccttgcatgaaaaccaaaatagaa
gcctgaagtctcttcaagtcaatttgaactttaggtcagaggcctctggc
tttcaagtcagaagtgaagcgtgagacagggtggtctggagaggccacag
atctttatgtgtgagtatggctctcccaaccctctgtcagtacactgaca
cttgtctgctgggcacactattgtcagacttttaatatgtttcttggaat
gcctgctctctctatgag

gaattctcacctgaggaataccaaatggctgagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggaggagctagagaaagtagccaaggagctaagggatctgcaccctat
agtggacacattatgagctaacagtaccccggagctcttgactctagctg
catatatatcaaagatggctagttcgtcatccactggaaggagaggccat
tgactggcaacctttaatgccagttacaggacaatacaggctaatgggaa
ttgggttggtcacgaggggcga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_8307035_8308154
seq2: B6Ng01-250B21.b_48_1165 (reverse)

seq1  CTCAT--AGAGAGCA-GCATTCCAAG-AACATATTAAAAATGTCTGAC-A  45
      |||||  |||||||| |||||||||| ||||||||||||  ||||||| |
seq2  CTCATAGAGAGAGCAGGCATTCCAAGAAACATATTAAAA--GTCTGACAA  48

seq1  TAGTGTGCCCAGCAGACAAAGTGTTCCAGTGTACTGACAGAGGGTTGGGA  95
      ||||||||||||||||| ||||||  ||||||||||||||||||||||||
seq2  TAGTGTGCCCAGCAGAC-AAGTGT--CAGTGTACTGACAGAGGGTTGGGA  95

seq1  GAGCCATAACTCACACATAAAGATCTGTGGCCTCTCCCAGACCACCCTGT  145
      ||||||| ||||||||||||||||||||||||||| ||||||||||||||
seq2  GAGCCAT-ACTCACACATAAAGATCTGTGGCCTCT-CCAGACCACCCTGT  143

seq1  CTCACGCTTCACTTCTGACTTGAAAGCCAGAGGCCTCTGACCTAAAGTTC  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACGCTTCACTTCTGACTTGAAAGCCAGAGGCCTCTGACCTAAAGTTC  193

seq1  AAATTGACTTGAAGAGACTTCAGGCTTCTATTTTGGTTTTCATGCAAGGA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGACTTGAAGAGACTTCAGGCTTCTATTTTGGTTTTCATGCAAGGA  243

seq1  AATACAAATTTAAGATATACCAGAGCTGAAAGGATTCTCAGTGGACAAGA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAAATTTAAGATATACCAGAGCTGAAAGGATTCTCAGTGGACAAGA  293

seq1  GTCCACATGCATGAAGACTTCGGTCTGGATCTTCCAGCACCCACATAAAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCACATGCATGAAGACTTCGGTCTGGATCTTCCAGCACCCACATAAAA  343

seq1  AGCCCTGAGCATCTCAGGCACCTGTAACGCAAGTGCCAGCTGGGAGAAGT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTGAGCATCTCAGGCACCTGTAACGCAAGTGCCAGCTGGGAGAAGT  393

seq1  GCCTTATGGCTTGCTCAAACCCAGCAAGCTCTAGGTTCCATGAGACACTC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTATGGCTTGCTCAAACCCAGCAAGCTCTAGGTTCCATGAGACACTC  443

seq1  AGTCTTAAGAGACTAAAGAAGAAAAATAGAAGACATTAATGTCATCCTCT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTAAGAGACTAAAGAAGAAAAATAGAAGACATTAATGTCATCCTCT  493

seq1  GGCCTCTACATGTTCATGCATGGATGCACTCATCTGTTCACACACACATA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCTACATGTTCATGCATGGATGCACTCATCTGTTCACACACACATA  543

seq1  CACACACACAAAGCTATATACATATATGTACACATGCATGTGCATACATG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACAAAGCTATATACATATATGTACACATGCATGTGCATACATG  593

seq1  TGCCTGAAAATGTTGCATTATTTCCCCCTCTGATCTACATAAAAAGTAAA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGAAAATGTTGCATTATTTCCCCCTCTGATCTACATAAAAAGTAAA  643

seq1  GTTTACTGGAATATAAAATAAATCCTGATTAAAAGTTAAGACATATTAAA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACTGGAATATAAAATAAATCCTGATTAAAAGTTAAGACATATTAAA  693

seq1  CAGAAACACTTTTAATCATTTACTGTCAAAAACAACTTAAAGTTATTGGA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAACACTTTTAATCATTTACTGTCAAAAACAACTTAAAGTTATTGGA  743

seq1  TCTGTTATTTGTACTCTTCCTCACATATTTATGCTGGTTTCCAGATAAAA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTATTTGTACTCTTCCTCACATATTTATGCTGGTTTCCAGATAAAA  793

seq1  TGGGGTGTGTCTCATGGTAAAAACATTTGTCTTAGGTCCCTAGAGACTAT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTGTGTCTCATGGTAAAAACATTTGTCTTAGGTCCCTAGAGACTAT  843

seq1  AGAGATCTATGACTTTACTGCACTGGATCTTTCCCTCCTGATTCTTGTAG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATCTATGACTTTACTGCACTGGATCTTTCCCTCCTGATTCTTGTAG  893

seq1  TTTTAGATATCTGTCCTGAATGTAAGACTGTAAATATAGAATAAATTAGA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGATATCTGTCCTGAATGTAAGACTGTAAATATAGAATAAATTAGA  943

seq1  TGTAGGAAAACAAATGAGCACCAGGGGGCAGCATAGACCTGATCCTGCAC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGAAAACAAATGAGCACCAGGGGGCAGCATAGACCTGATCCTGCAC  993

seq1  TGGGTCTTGTACAGGTCCAAAGTGACTCTCTACTGAAGACATATCAGAAT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCTTGTACAGGTCCAAAGTGACTCTCTACTGAAGACATATCAGAAT  1043

seq1  CTGAAAGTACTCAAGAGTCCCTACCCAGAAGCCCCCGGTAGCAAATTCGT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAGTACTCAAGAGTCCCTACCCAGAAGCCCCCGGTAGCAAATTCGT  1093

seq1  GACCTTTCTATACGGTGCTGAATTC  1120
      |||||||||||||||||||||||||
seq2  GACCTTTCTATACGGTGCTGAATTC  1118


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