BAC Information

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BAC

Clone NameB6Ng01-250H07
Chromosome4 (Build37)
Map Location 66,106,573 - 66,107,497
singlet/doubletsinglet
Overlap genenone
Upstream geneAstn2, Trim32
Downstream geneLOC667499, Tlr4, LOC100039379
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-250H07.bB6Ng01-250H07.g
ACCGA057997GA057998
length1,262925
definitionB6Ng01-250H07.b B6Ng01-250H07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcagccctcataatatatgcctctacctgaggaatgtcacatag
ccttaattagtttataggaccaatttcttttctcctgacaaaatctgttc
aggcagtacctgagattcctgaaatgctttcccatgcaactgaagccttc
caggtaccctaagtccatattgaatgacttctgtttatcctggatgtcca
taccctcagtactccctaactttataagctaccaatcacccttagtaaag
tggatctgtctactgactgcaggtcccagtttggtcattcactgtacata
atcacagggcttctggaccttctggtagacagctctgctcagattgctct
cgtggactgtattggtcgaagatccacgagagcagggagaccaatattgg
atatcaaagctactgcatggatattctgaataacttgctgtgggtttgat
ggcaaagtgcctgctctccttctttagtcagggaatattgactactaggt
tgtggaccctggaatttgcttttgcaaagaggcaattttttctcctctgg
ccaaggtaaagggtataacaaattgaactagcaagcaggttccataccag
tcaggtggtagacttaggtacaatgatggcctgttcacattctcacattt
tcattctgggaacattgagagcgtattgcccctcttttgtttaagatatt
ttttaaatttatttttacaccccatagtccattccctaccccaccccacc
ccccaattcacgctctgactgcttcatatcccacaccttgtccccacctc
ccacccccgctgacctctaaactccctggggcctccagtctctttgagag
tctcttgcatcatctcttgaatgaacacagaccaggaagtcctctactct
atgtgtctttttgggccttcatatcagctggtgtatgctggtctgtttgg
gtggttccagtgtttgaggagatctctgggggctccagttaaattgagac
tgctgctcctcctgcaggaatcatctttctccttcagcttcttttcagcc
gttcctaattcaacaacaggggtcagattgctttgtgtccattaggttga
atgcaataactataattcgacctctttcagcgtgcttgtgtgggtctttc
aaagggcagtcaatgatagaatccacattttgtcagcctcgtacctacgg
ataatatttcagccctgtggaccctacctctgtggctcacaaaatatcac
atccatttttga

gaattccttctacacagagagtatacaagtctgttaattaatgtcccgtg
agacttggatgagctgttgtcatgggaagccagtgatgcctgtacagtca
tgctggctcacttgcctgacatatccagacattagatgcttcaaggggaa
aatacctgtgatctgcattggctctgttcccaaaatgctgaaatttatgg
gcaggatgatgggaggagagctgagaatagctttaggctcaatttcaagg
gctccagtgggggcccagcccttattttctgacttcccagttgacaggta
aaaggacagtacaagtatgaaatatcagggccaatgttcctctggatcat
ttctggtgttttccagatgtaatgacttctcataattaccaggagcactg
agaaaatcacacactgagtcccacagaagaggccagagaccaaagagtga
gtgttctctgtaatagcatttgggagatgttgatgatcagccaggtgaag
ggatatcattcaaatctaatagaaaaatattcacatttcacagatgtcaa
aatggcagcagagaaacaagaaaagcaagcagcctaaaacagtggtcagg
ggcaagataattgttcattgcataaacagactagctgtccaaacctgaca
acctgagtttattctccaggaaccaagttaaaacaacaacaaaaacaaag
tccaagtgttggaaaataaatttaaagcccattattcctcttgcaagatg
gaagcagaaacaggagaaatgcctgtaaagtcagggttgacctagcctgg
agtgtgtagctcagcatcagaagcaagagggaactactgtcttaagttgg
aaggaagaaccatctcacaaactcattctttggattccacagccttggct
atagccaggattcagacctacatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_66106573_66107497
seq2: B6Ng01-250H07.g_66_990

seq1  GAATTCCTTCTACACAGAGAGTATACAAGTCTGTTAATTAATGTCCCGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCTACACAGAGAGTATACAAGTCTGTTAATTAATGTCCCGTG  50

seq1  AGACTTGGATGAGCTGTTGTCATGGGAAGCCAGTGATGCCTGTACAGTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTGGATGAGCTGTTGTCATGGGAAGCCAGTGATGCCTGTACAGTCA  100

seq1  TGCTGGCTCACTTGCCTGACATATCCAGACATTAGATGCTTCAAGGGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGCTCACTTGCCTGACATATCCAGACATTAGATGCTTCAAGGGGAA  150

seq1  AATACCTGTGATCTGCATTGGCTCTGTTCCCAAAATGCTGAAATTTATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCTGTGATCTGCATTGGCTCTGTTCCCAAAATGCTGAAATTTATGG  200

seq1  GCAGGATGATGGGAGGAGAGCTGAGAATAGCTTTAGGCTCAATTTCAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGATGATGGGAGGAGAGCTGAGAATAGCTTTAGGCTCAATTTCAAGG  250

seq1  GCTCCAGTGGGGGCCCAGCCCTTATTTTCTGACTTCCCAGTTGACAGGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCAGTGGGGGCCCAGCCCTTATTTTCTGACTTCCCAGTTGACAGGTA  300

seq1  AAAGGACAGTACAAGTATGAAATATCAGGGCCAATGTTCCTCTGGATCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGACAGTACAAGTATGAAATATCAGGGCCAATGTTCCTCTGGATCAT  350

seq1  TTCTGGTGTTTTCCAGATGTAATGACTTCTCATAATTACCAGGAGCACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGTGTTTTCCAGATGTAATGACTTCTCATAATTACCAGGAGCACTG  400

seq1  AGAAAATCACACACTGAGTCCCACAGAAGAGGCCAGAGACCAAAGAGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATCACACACTGAGTCCCACAGAAGAGGCCAGAGACCAAAGAGTGA  450

seq1  GTGTTCTCTGTAATAGCATTTGGGAGATGTTGATGATCAGCCAGGTGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCTCTGTAATAGCATTTGGGAGATGTTGATGATCAGCCAGGTGAAG  500

seq1  GGATATCATTCAAATCTAATAGAAAAATATTCACATTTCACAGATGTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATCATTCAAATCTAATAGAAAAATATTCACATTTCACAGATGTCAA  550

seq1  AATGGCAGCAGAGAAACAAGAAAAGCAAGCAGCCTAAAACAGTGGTCAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCAGCAGAGAAACAAGAAAAGCAAGCAGCCTAAAACAGTGGTCAGG  600

seq1  GGCAAGATAATTGTTCATTGCATAAACAGACTAGCTGTCCAAACCTGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGATAATTGTTCATTGCATAAACAGACTAGCTGTCCAAACCTGACA  650

seq1  ACCTGAGTTTATTCTCCAGGAACCAAGTTAAAACAACAACAAAAACAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGAGTTTATTCTCCAGGAACCAAGTTAAAACAACAACAAAAACAAAG  700

seq1  TCCAAGTGTTGGAAAATAAATTTAAAGCCCATTATTCCTCTTGCAAGATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGTGTTGGAAAATAAATTTAAAGCCCATTATTCCTCTTGCAAGATG  750

seq1  GAAGCAGAAACAGGAGAAATGCCTGTAAAGTCAGGGTTGACCTAGCCTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAGAAACAGGAGAAATGCCTGTAAAGTCAGGGTTGACCTAGCCTGG  800

seq1  AGTGTGTAGCTCAGCATCAGAAGCAAGAGGGAACTACTGTCTTAAGTTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGTAGCTCAGCATCAGAAGCAAGAGGGAACTACTGTCTTAAGTTGG  850

seq1  AAGGAAGAACCATCTCACAAACTTCATTCTTTGGATTCCACAGCCTTGGC  900
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AAGGAAGAACCATCTCACAAAC-TCATTCTTTGGATTCCACAGCCTTGGC  899

seq1  TATAGCCA-GATTCAGACCTACATCT  925
      |||||||| |||||||||||||||||
seq2  TATAGCCAGGATTCAGACCTACATCT  925


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