BAC Information

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BAC

Clone NameB6Ng01-250M07
Chromosome4 (Build37)
Map Location 18,914,936 - 18,916,051
singlet/doubletsinglet
Overlap geneLOC435772
Upstream geneMmp16, LOC667251
Downstream geneCngb3, LOC623122, Cpne3, LOC100040306, 2410005O16Rik, Wwp1, Slc7a13, Atp6v0d2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-250M07.bB6Ng01-250M07.g
ACCGA058220GA058221
length8041,126
definitionB6Ng01-250M07.b B6Ng01-250M07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctctccaatacttttaacatgaagggttgttgcattttg
tcaagtgctttttcagcatctaaggagatgatcatgtgatttttttcttt
gactttgtttatatagtggagtactttaatggatttttgtatattgaacc
attcttgcatccctgtgatgaagcctacttggtcatcgtgaatggtagtt
tttatgtattctaggatttgtcttgcaagaattttattgaacatttttgc
atcgatatcatgagcaatattggtctgaagttctcttttatttttttttt
tggttgggcccttgtatggtatagttattagagttattgtgacttcatag
aacgaattaggtagtgttccttttattccttttgtttctactttatggaa
tagtttgaggaacattggtatcaggtcttctttgaaggcctggtagaatt
ctgcactaaattcatctcatcccaggcctttttgttgttgttgttgttgt
tgttgaatatgggattcttgtgcctttttgtggcctcttttcctcccatg
tgttttttcctattctgatatgttttttaaactattactatattatgttt
actttttttcttgtcccttagaagcttgtttctttactattgagagacag
aaagggagtggaggatgggagagggaggagaaagcccaatcacatcatat
tatatgagaataatctattgccagtaaaagacaaaaactaaatatttaca
aggatactatgatgaaaaatgcttgttttggaaattttggggtgcaataa
atat

gaattcaaaggctacaacagaactcaaggagtcttccatccagatttcaa
aggaaaaactgagaagacattctatgtgtgatagataaggttatggttcc
tgtgtgatctccaagtaataggagaaggtgtgagagcaaagttaatgctc
tagtagaaacccctgaaagttcaaaatgccagacactgggaaaggaaagt
tgtagctggaggcagaaaattgaattcagaaggatgttggatatagccat
cacagccatgtagtgtgaaaaatcagtccaatgtgaccacagacaccaga
agaaaagggtagattctttgtagctgcagtgataggaagctgtgaatgcc
ctgttgtgggtgctgggaactgaactcactgttaagttatttgtagcatg
gagtgttttgtgcaagatagtttctgaacctactaaatcctagaaaatag
agcatccaaaaataatatttttcttcctgtgtaggaaatcataggagata
ctaagataggtaactattttaattgagtggcatttggatgcacttctgtc
atggagcaaaggtgctttgttgtgagaaagaagaaaataataaaaagaat
ggtaatttcactcagaaatgaaaggtaaaatactgtatttgaaggttctt
caaatatactttaataatatttaataatgttaaatgtaaaatcctgaata
aactctgacaacttattatattctctgacacatgaatgtgtacatctatt
tattcattgatacagcttttacttctaaaagttattaaaatcaaatgacc
aaaagagaaagcaagatttacaaggacacactgagaccaacatcccaact
taggtacatacaatctgatgccaccaatttggaaaattagttaactttca
tggaacatgtctgtttcttaatataaaaatacctttcaaagtgtgtaggg
gatcaaattgggatgaaaataaaaatcaattgctatttttcttctcattc
tgtctttgaaatattacgtttccctaccagtaccaaaatatggactaaaa
tttattttattggattcattaaaggtacattcttaactgccttcttatat
gcaactatttgtaaagtaacttaaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_18914936_18916051
seq2: B6Ng01-250M07.g_69_1194

seq1  GAATTCAAAGGCTACAACAGAACTCAAGGAGTCTTCCATCCAGATTTCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGGCTACAACAGAACTCAAGGAGTCTTCCATCCAGATTTCAA  50

seq1  AGGAAAAACTGAGAAGACATTCTATGTGTGATAGATAAGGTTATGGTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAACTGAGAAGACATTCTATGTGTGATAGATAAGGTTATGGTTCC  100

seq1  TGTGTGATCTCCAAGTAATAGGAGAAGGTGTGAGAGCAAAGTTAATGCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGATCTCCAAGTAATAGGAGAAGGTGTGAGAGCAAAGTTAATGCTC  150

seq1  TAGTAGAAACCCCTGAAAGTTCAAAATGCCAGACACTGGGAAAGGAAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGAAACCCCTGAAAGTTCAAAATGCCAGACACTGGGAAAGGAAAGT  200

seq1  TGTAGCTGGAGGCAGAAAATTGAATTCAGAAGGATGTTGGATATAGCCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCTGGAGGCAGAAAATTGAATTCAGAAGGATGTTGGATATAGCCAT  250

seq1  CACAGCCATGTAGTGTGAAAAATCAGTCCAATGTGACCACAGACACCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCCATGTAGTGTGAAAAATCAGTCCAATGTGACCACAGACACCAGA  300

seq1  AGAAAAGGGTAGATTCTTTGTAGCTGCAGTGATAGGAAGCTGTGAATGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGGGTAGATTCTTTGTAGCTGCAGTGATAGGAAGCTGTGAATGCC  350

seq1  CTGTTGTGGGTGCTGGGAACTGAACTCACTGTTAAGTTATTTGTAGCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGTGGGTGCTGGGAACTGAACTCACTGTTAAGTTATTTGTAGCATG  400

seq1  GAGTGTTTTGTGCAAGATAGTTTCTGAACCTACTAAATCCTAGAAAATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTTTTGTGCAAGATAGTTTCTGAACCTACTAAATCCTAGAAAATAG  450

seq1  AGCATCCAAAAATAATATTTTTCTTCCTGTGTAGGAAATCATAGGAGATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCCAAAAATAATATTTTTCTTCCTGTGTAGGAAATCATAGGAGATA  500

seq1  CTAAGATAGGTAACTATTTTAATTGAGTGGCATTTGGATGCACTTCTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGATAGGTAACTATTTTAATTGAGTGGCATTTGGATGCACTTCTGTC  550

seq1  ATGGAGCAAAGGTGCTTTGTTGTGAGAAAGAAGAAAATAATAAAAAGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGCAAAGGTGCTTTGTTGTGAGAAAGAAGAAAATAATAAAAAGAAT  600

seq1  GGTAATTTCACTCAGAAATGAAAGGTAAAATACTGTATTTGAAGGTTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAATTTCACTCAGAAATGAAAGGTAAAATACTGTATTTGAAGGTTCTT  650

seq1  CAAATATACTTTAATAATATTTAATAATGTTAAATGTAAAATCCTGAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATACTTTAATAATATTTAATAATGTTAAATGTAAAATCCTGAATA  700

seq1  AACTCTGACAACTTATTATATTCTCTGACACATGAATGTGTACATCTATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTGACAACTTATTATATTCTCTGACACATGAATGTGTACATCTATT  750

seq1  TATTCATTGATACAGCTTTTACTTCTAAAAG-TATTAAAATCAAATGACC  799
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TATTCATTGATACAGCTTTTACTTCTAAAAGTTATTAAAATCAAATGACC  800

seq1  AAAAGAG-AAGCAAGATTTACAA-GACACACTGAGACCAACATCCCAACT  847
      ||||||| ||||||||||||||| ||||||||||||||||||||||||||
seq2  AAAAGAGAAAGCAAGATTTACAAGGACACACTGAGACCAACATCCCAACT  850

seq1  TAGGTACATACAATCTGATGCCACCATTTTGGAAAATTAGTTAAC-TTCA  896
      |||||||||||||||||||||||||| |||||||||||||||||| ||||
seq2  TAGGTACATACAATCTGATGCCACCAATTTGGAAAATTAGTTAACTTTCA  900

seq1  TGGAACATGTCTGTTTCTTAATATAAAAATACC-TTCAAAGTGTGTA-GG  944
      ||||||||||||||||||||||||||||||||| ||||||||||||| ||
seq2  TGGAACATGTCTGTTTCTTAATATAAAAATACCTTTCAAAGTGTGTAGGG  950

seq1  GATCAAATT-GGATTGAAATAAAAATCAATTGCTA-TTTTCTTCTCATTC  992
      ||||||||| ||||  ||||||||||||||||||| ||||||||||||||
seq2  GATCAAATTGGGATGAAAATAAAAATCAATTGCTATTTTTCTTCTCATTC  1000

seq1  TGTCCTTTGAATATTACGTTTCCTTACCAGTA-CAAAATAT-GACTAAAA  1040
      |||| ||  |||||||||||||| |||||||| |||||||| ||||||||
seq2  TGTCTTTGAAATATTACGTTTCCCTACCAGTACCAAAATATGGACTAAAA  1050

seq1  TTTATTATA-TGGATTCATTAAAAGTACATTCTTAACTGTCTTCTTATAT  1089
      |||||| || ||||||||||||| ||||||||||||||| ||||||||||
seq2  TTTATTTTATTGGATTCATTAAAGGTACATTCTTAACTGCCTTCTTATAT  1100

seq1  GCAAACTATTTGTAAAGTAACTAAAAC  1116
      || ||||||||||||||||||| ||||
seq2  GC-AACTATTTGTAAAGTAACTTAAAC  1126


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