BAC Information

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BAC

Clone NameB6Ng01-250N23
Chromosome4 (Build37)
Map Location 85,014,582 - 85,015,731
singlet/doubletsinglet
Overlap geneSh3gl2
Upstream geneBnc2, LOC100040660, LOC624465, LOC100040284, D530005L17Rik, LOC622811, LOC100040303
Downstream geneA930009N24, LOC668052, Adamtsl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-250N23.bB6Ng01-250N23.g
ACCGA058296GA058297
length4731,139
definitionB6Ng01-250N23.b B6Ng01-250N23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tcaatagaggaatcttaaaaggccaagaatcacttaaagaaatattcaaa
atccagagtcatcagggaaatgttaatcaaaacaactctgagattccatc
ttacacccatcacaatgacaaatggatggaacttgagaatataatcttga
gtgaggtaacccagtccaaaaggatatgcatggtatgtactcacttatga
gtagataccacccataaaatacaggtaccatgctacactccacagaccca
aagaagctaagcaagagtgaaggtccaagcaaagaagcttgaatctcact
tggaagggggaataaaatagtcataagaaccaagtgaagggaaggaactg
ggagggaggggaataggagggctcaggatatggtgtggggaaggacagga
gagatggctagatagccatgaaaatggatggaagtctgccagtgggggtg
gtggtgaggaggtcctggtcatg

gaattcacttataggcattttgtcttttcttaattcctctttcttgatct
cctttctaaaccttctactatacccacacatacatgtctttagttatata
gatgtatatgttttaggcttggacccatatatgagtgacaacatgctttt
tttttcctgtgagattgagtgacctcaatttttattttatgttctaggta
tatccattttcccaaaagttttgtgatttaatttttctatagagctaagt
agtattctgctttatattatgcactaggttttcattattcactcatctgt
caacaaacaattgggatgtttccaattcttatctatagtgaatagagcag
caaaaggcatggggcacatgcatttctcaagtatgctgtggagttctttg
ggtgtatgcacaggtgtgacacagctggcttgtacagtagttccagttta
aatattttgagtaactgctgaattgattttttgtgtggcttttcagtaaa
actaactagtacatctgtgtatatctgtgttgtccatggacacatttctg
gtggaacaatgtgaagaggtggaatcatagaacatcagtgttcagacgta
ataaatattgcctattagtatccaaattcgtcctaccctcagagcaatac
atgagagttctggttgcccaccctgagtgcccagggtgtctgtttcatgg
gcttagttcattgctgcagatcctcagaatggactgtctaactctgcatc
taagttcatttttcagaaactcagcctaagtgccacttgttggatgagcc
tcccagccttgctgttttaggggtaaatgtgctcttctatgtgtgtaaat
gcagcacggtgtggtctacttcctgcctcatgtcagtgagtgaggatatg
tctgactgtgtacaccagtttccttgagcacagtcgccctcacagagcag
tgctcaaggaatccttgttttatctatcattgcaggaaaccttcaagtat
ttatttgataatcaccatccaacagtaaatcaaacttactgtgtagggaa
aacatagtctttcatgtgacttaggagagttagggtgttgctctgtgtca
aagctgcccaatctctggagtagctgtactatcaccaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_85014582_85015731
seq2: B6Ng01-250N23.g_68_1206

seq1  GAATTCACTTATAGGCATTTTGTCTTTTCTTAATTCCTCTTTCTTGATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTATAGGCATTTTGTCTTTTCTTAATTCCTCTTTCTTGATCT  50

seq1  CCTTTCTAAACCTTCTACTATACCCACACATACATGTCTTTAGTTATATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCTAAACCTTCTACTATACCCACACATACATGTCTTTAGTTATATA  100

seq1  GATGTATATGTTTTAGGCTTGGACCCATATATGAGTGACAACATGCTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTATATGTTTTAGGCTTGGACCCATATATGAGTGACAACATGCTTTT  150

seq1  TTTTTCCTGTGAGATTGAGTGACCTCAATTTTTATTTTATGTTCTAGGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCTGTGAGATTGAGTGACCTCAATTTTTATTTTATGTTCTAGGTA  200

seq1  TATCCATTTTCCCAAAAGTTTTGTGATTTAATTTTTCTATAGAGCTAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCATTTTCCCAAAAGTTTTGTGATTTAATTTTTCTATAGAGCTAAGT  250

seq1  AGTATTCTGCTTTATATTATGCACTAGGTTTTCATTATTCACTCATCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTCTGCTTTATATTATGCACTAGGTTTTCATTATTCACTCATCTGT  300

seq1  CAACAAACAATTGGGATGTTTCCAATTCTTATCTATAGTGAATAGAGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAACAATTGGGATGTTTCCAATTCTTATCTATAGTGAATAGAGCAG  350

seq1  CAAAAGGCATGGGGCACATGCATTTCTCAAGTATGCTGTGGAGTTCTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGGCATGGGGCACATGCATTTCTCAAGTATGCTGTGGAGTTCTTTG  400

seq1  GGTGTATGCACAGGTGTGACACAGCTGGCTTGTACAGTAGTTCCAGTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTATGCACAGGTGTGACACAGCTGGCTTGTACAGTAGTTCCAGTTTA  450

seq1  AATATTTTGAGTAACTGCTGAATTGATTTTTTGTGTGGCTTTTCAGTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTGAGTAACTGCTGAATTGATTTTTTGTGTGGCTTTTCAGTAAA  500

seq1  ACTAACTAGTACATCTGTGTATATCTGTGTTGTCCATGGACACATTTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACTAGTACATCTGTGTATATCTGTGTTGTCCATGGACACATTTCTG  550

seq1  GTGGAACAATGTGAAGAGGTGGAATCATAGAACATCAGTGTTCAGACGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAACAATGTGAAGAGGTGGAATCATAGAACATCAGTGTTCAGACGTA  600

seq1  ATAAATATTGCCTATTAGTATCCAAATTCGTCCTACCCTCAGAGCAATAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATATTGCCTATTAGTATCCAAATTCGTCCTACCCTCAGAGCAATAC  650

seq1  ATGAGAGTTCTGGTTGCCCACCCTGAGTGCCCAGGGTGTCTGTTTCATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAGTTCTGGTTGCCCACCCTGAGTGCCCAGGGTGTCTGTTTCATGG  700

seq1  GCTTAGTTCATTGCTGCAGATCCTCAGAATGGACTGTCTAACTCTGCATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGTTCATTGCTGCAGATCCTCAGAATGGACTGTCTAACTCTGCATC  750

seq1  TAAGTTCATTTTTCAGAAACTCAGCCTAAGTGCCACTTGTTGGATGAGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTCATTTTTCAGAAACTCAGCCTAAGTGCCACTTGTTGGATGAGCC  800

seq1  TCCCAGCCTTGCTGTTTTAGGGGTAAATGTGCTCTTCTATGTGTGTAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGCCTTGCTGTTTTAGGGGTAAATGTGCTCTTCTATGTGTGTAAAT  850

seq1  GCAGCACGGTGTGGTCTACTTCCTGCCTCATGTCAGTGAGTGAGGATATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCACGGTGTGGTCTACTTCCTGCCTCATGTCAGTGAGTGAGGATATG  900

seq1  TCTGACTGTGTACACCAG-TTCCTTGAGCACAGTCGCCCTCACAGAGCAG  949
      |||||||||||||||||| |||||||||||||||||||||||||||||| 
seq2  TCTGACTGTGTACACCAGTTTCCTTGAGCACAGTCGCCCTCACAGAGCA-  949

seq1  GTGCTCAAGGAATCCTTGTTTTATCTATCATTGCAGGGAAACCTTTCAAG  999
      ||||||||||||||||||||||||||||||||||| ||||||| ||||||
seq2  GTGCTCAAGGAATCCTTGTTTTATCTATCATTGCA-GGAAACC-TTCAAG  997

seq1  TATTTAATTTTGATAAATCACCAATCCAACAGTAAAATTCCAAACTTTAC  1049
      ||||||  |||||| ||||||| |||||||||||||    ||||| ||||
seq2  TATTTA--TTTGAT-AATCACC-ATCCAACAGTAAA---TCAAAC-TTAC  1039

seq1  TGTGTAGGGAAAACATAGTTCTTTTCAATGTGACCTA-GAGAGGTA-GGT  1097
      |||||||||||||||||| |||||   ||||||| || ||||| || |||
seq2  TGTGTAGGGAAAACATAG-TCTTT--CATGTGACTTAGGAGAGTTAGGGT  1086

seq1  GTTGCTCTGTGCCCAGGCTGCCCCAGTTCTCTTGTAGTTAGCTG----GT  1143
      ||||||||||| | | ||||||| |  |||| || || ||||||     |
seq2  GTTGCTCTGTGTCAAAGCTGCCCAA--TCTC-TGGAG-TAGCTGTACTAT  1132

seq1  CACCAAC  1150
      |||||||
seq2  CACCAAC  1139


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