BAC Information

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BAC

Clone NameB6Ng01-251D01
Chromosome4 (Build37)
Map Location 140,176,367 - 140,176,783
singlet/doubletsinglet
Overlap geneArhgef10l
Upstream geneAldh4a1, Tas1r2, Pax7, Gm1667, Klhdc7a, Igsf21, LOC100040728
Downstream geneRcc2, Padi6, Padi4, Padi3, Padi1, Padi2, Sdhb, Atp13a2, Mfap2, Crocc, Necap2, LOC638991, Spata21, D4Ertd22e, Fbxo42, 6330545A04Rik, Arhgef19, Epha2, Gm693, Clcnka, Clcnkb, Hspb7, Gm694, Zbtb17, Spen, LOC100042951, B330016D10Rik, Fblim1, BC025833, Slc25a34
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251D01.bB6Ng01-251D01.g
ACCGA058525GA058526
length7411,172
definitionB6Ng01-251D01.b B6Ng01-251D01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaagcatctagaaaagcttggcggggcgggggggacaggacctg
gaggacatagggacttggggtgaacaggatattcacctgctaattatgag
gattctagaatgtatcctgagcactgcaagatttcatgaagatttcctgg
ttgctggggataggagcagggagaaataagagggagggggcagtgagcaa
gatgggggcctggaacaagagaggccagggagcccagtcaagatgcaact
tccggggtcccaactggaagttctagggctgagtctaggatgaagctgag
ggtggtggtggtgaatgctagggtttctctgagacaagaaagaatgcgac
actacttgatgaacgggaaacttcctccatgtttgccatctatgctcaca
tcaccccatcatttagagagaaggaaactgaggccagagacgttaaggtt
tgccccaggtcacaacacacaaccaaggtgggcagctgacagagcaggac
acagcacaggactctgatcccaggaactctgctcaacactctggctacac
tgcccccctggacttaagagttggactttggaggcacgtgatccaggcta
aaagggaggtagagctggaacctcctccaagcaaggacatatgctagtga
gccatatttcacactcacgggcttgtggctgccactctgcgcaaagctta
ctagtctctgaaggatgtggggggaagtgaggggatgggtt
gaattcaagaaactagatatcaacaagccaaataatccaattaaaagtgg
ggtacagatctaaacagagaattctcatcagagaaatctcaaatggtcat
gaaatacttaaagagatgttcaagatccttaaggattagggaaatgcaga
tcaaaacaactttgaaatctcatcttacaccattcagaatgactaagatc
aataacacaaatgacagttcagctatcgaagatgtgggccaaggggaaca
ctcctccattgctggtaggagtgcaaacttgtttggccacttttgaaatc
aatatgacagtttctcagaaaactaggaatggatctatctcaaaacctag
atatatcaatcctgggcatatacccaaagaacactccatcctaccacaag
gacacttgctcaattatgttcatagtagatttattcataatagacagaaa
ctggaaacaacttagatgttcctcaactgaagaatggataaagagattgt
agtacattacacaaaaacaatggaatattactcagttgttaaaaataaca
tcagaaattcttcaggcaaatggatggaactgaaaaacatcatcctgagt
gatgtagcttaaacccaggaagataaacatggtatgtactcactcataag
tggatattatctacaaagtaaagaataatcatgctataatctgcagaccc
atagaagctacacaacaaggaggactcaagggacacaagaatcttcctga
gaatgtaaatagactagattttatgggaagagggggaaattaccaggaga
gcccacatttgggggagaactggaaacctagggcaatagaaattccctgg
aacctacaagggtgaccctagcaaagactcctagtgaagactagtgatgg
ggaatacagagccctgaagaggccatcttctgtaacaagcaaggcttcca
gtggtgagattgagacacagcctaacctcaaaacctttaacctacatttg
atctgcttgcagatgagctggggtaaatatgcacagaaatgtcagtggcc
aaccatgctggtccagttgagatccatgccttgtaagaactatgcctgaa
cctgctggatacaggaaccgaaggcctggatgcccgaagatctaggaatt
gaaacccaagccacagtggatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_140176367_140176783
seq2: B6Ng01-251D01.b_363_782

seq1  GGTTTCTCTGAGACAAGAAAGCATGCGACAGTACTTACGGAACAAGAAAC  50
      ||||||||||||||||||||| |||||||| |||||   ||||  |||||
seq2  GGTTTCTCTGAGACAAGAAAGAATGCGACACTACTTGATGAACGGGAAAC  50

seq1  TTCCTCCATGTTTGCCATCTATGCTCACATCACCCCATCATTTAGAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCATGTTTGCCATCTATGCTCACATCACCCCATCATTTAGAGAGA  100

seq1  AGGAAACTGAGGCCAGAGACGTTAAGGTTTGCCCCAGGTCACAACACACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAACTGAGGCCAGAGACGTTAAGGTTTGCCCCAGGTCACAACACACA  150

seq1  ACCAAGGTGGGCAGCTGACAGAGCAGGACACAGCACAGGACTCTGATCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGGTGGGCAGCTGACAGAGCAGGACACAGCACAGGACTCTGATCCC  200

seq1  AGGAACTCTGCTCAACACTCTGGCTACACTGCCCCCCTGGACTTAAGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACTCTGCTCAACACTCTGGCTACACTGCCCCCCTGGACTTAAGAGT  250

seq1  TGGACTTTGGAGGCACGTGATCCAGGCTAAAAGGGAGGTAGAGCTGGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTTTGGAGGCACGTGATCCAGGCTAAAAGGGAGGTAGAGCTGGAAC  300

seq1  CTCCTCCAAGCAAGGACATATGCTAGTGAGCCATA-TTCACACTCACGGG  349
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CTCCTCCAAGCAAGGACATATGCTAGTGAGCCATATTTCACACTCACGGG  350

seq1  CTTGTGGCTGCCACTCTGCGCAAAGC-TACTAGTCTCTGAAGGATGT-GG  397
      |||||||||||||||||||||||||| |||||||||||||||||||| ||
seq2  CTTGTGGCTGCCACTCTGCGCAAAGCTTACTAGTCTCTGAAGGATGTGGG  400

seq1  GGGAAGTGAGGGGATGGGCT  417
      |||||||||||||||||| |
seq2  GGGAAGTGAGGGGATGGGTT  420