BAC Information

Click to search

BAC

Clone NameB6Ng01-251O22
Chromosome4 (Build37)
Map Location 38,596,984 - 38,597,960
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC277771, LOC100039448
Downstream geneLOC665520, LOC100039487, 1700009N14Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251O22.bB6Ng01-251O22.g
ACCGA059065GA059066
length935974
definitionB6Ng01-251O22.b B6Ng01-251O22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttatttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacatgccattgctgtt
ctgttcaggaatttttcccctgtgcccatattttcaaggcttttctccac
tttctcctctataagtttcagtgtctctggttttaaatgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcac
attcttctacatgataacaaccagttgtgccagcatcaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccattggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaagtgctccttctaattcgttgaagaattgagttggaatttt
gatgggattgcattgaatctgtagattgcttttggcaagatagccatttt
tacaatgttgatcctgccaatccatgagcatgggagatccttccatcttc
tgagatcttctttaatttctttcttcagagacttgaagtttttatcatac
agatctttcacttccatagttagagtcacaccgag
gaattctatgtatgtgtgaaaactccacagaattgactcaaatgtacaca
gtacaggtcctattaaattggtgaaatataaaggagaagaaatgccttgt
tggaaaaagtatgtcattgggtatgaacttttggatttcagaagactgat
acagccacattggctctttctctctttgctgctgtttgtagatccagaca
tagaacccataacttctgcagtaccatgtctaactgtgtactgttattcc
ttccaccattatgagaattgactaaaccttcaaactataagcaagcccca
actaaagcccctgctgccctggtcatagtatctcttcatagaaatagaac
aatggataagatgaatagtatgacaaggtatttctctattgcttttacat
gtttgtcttagagtaacaaggaggtaaaacaataagatattctaaatcag
aagttctcttagtcccaagttgtcaaaaggaaagggagcaacagtgtgtt
ctaaggggaatgatacactctactgtgcagggaaatgccttatgctcagg
aagtaaataacccaaaggcttcagggagttcctgacatttaccaggttca
ctaggtcctccctcccttagcatatatacttcattcctccttagaacagg
gaacaaaatacctatggaaggagttacagagacaaagtttggagctaaga
tgaaaggatggaccactcagaaactgcctcaaccagggatccatcccata
atcaaataccaaacccagacactattgcatatgccagcaagattttgctg
aaaggactctgatatagctgtctcctgtgaggctatgccagtgcctggca
aatacagaagtggatgttcacagtcatctattggatggaacacaggtccc
agatggaggagctaaagaaagtacccaaggagctgagaggtctgcaaccc
tataggtggaacaacatatgaact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_38596984_38597960
seq2: B6Ng01-251O22.g_68_1041

seq1  GAATTCTATGTATGTGTGAAAACTCCACAGAATTGACTCAAATGTACACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGTATGTGTGAAAACTCCACAGAATTGACTCAAATGTACACA  50

seq1  GTACAGGTCCTATTAAATTGGTGAAATATAAAGGAGAAGAAATGCCTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGGTCCTATTAAATTGGTGAAATATAAAGGAGAAGAAATGCCTTGT  100

seq1  TGGAAAAAGTATGTCATTGGGTATGAACTTTTGGATTTCAGAAGACTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAAGTATGTCATTGGGTATGAACTTTTGGATTTCAGAAGACTGAT  150

seq1  ACAGCCACATTGGCTCTTTCTCTCTTTGCTGCTGTTTGTAGATCCAGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCACATTGGCTCTTTCTCTCTTTGCTGCTGTTTGTAGATCCAGACA  200

seq1  TAGAACCCATAACTTCTGCAGTACCATGTCTAACTGTGTACTGTTATTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACCCATAACTTCTGCAGTACCATGTCTAACTGTGTACTGTTATTCC  250

seq1  TTCCACCATTATGAGAATTGACTAAACCTTCAAACTATAAGCAAGCCCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACCATTATGAGAATTGACTAAACCTTCAAACTATAAGCAAGCCCCA  300

seq1  ACTAAAGCCCCTGCTGCCCTGGTCATAGTATCTCTTCATAGAAATAGAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAGCCCCTGCTGCCCTGGTCATAGTATCTCTTCATAGAAATAGAAC  350

seq1  AATGGATAAGATGAATAGTATGACAAGGTATTTCTCTATTGCTTTTACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGATAAGATGAATAGTATGACAAGGTATTTCTCTATTGCTTTTACAT  400

seq1  GTTTGTCTTAGAGTAACAAGGAGGTAAAACAATAAGATATTCTAAATCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTCTTAGAGTAACAAGGAGGTAAAACAATAAGATATTCTAAATCAG  450

seq1  AAGTTCTCTTAGTCCCAAGTTGTCAAAAGGAAAGGGAGCAACAGTGTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTCTTAGTCCCAAGTTGTCAAAAGGAAAGGGAGCAACAGTGTGTT  500

seq1  CTAAGGGGAATGATACACTCTACTGTGCAGGGAAATGCCTTATGCTCAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGGGAATGATACACTCTACTGTGCAGGGAAATGCCTTATGCTCAGG  550

seq1  AAGTAAATAACCCAAAGGCTTCAGGGAGTTCCTGACATTTACCAGGTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAATAACCCAAAGGCTTCAGGGAGTTCCTGACATTTACCAGGTTCA  600

seq1  CTAGGTCCTCCCTCCCTTAGCATATATACTTCATTCCTCCTTAGAACAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTCCTCCCTCCCTTAGCATATATACTTCATTCCTCCTTAGAACAGG  650

seq1  GAACAAAATACCTATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAAATACCTATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTAAGA  700

seq1  TGAAAGGATGGACCACTCAGAAACTGCCTCAACCAGGGATCCATCCCATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGGATGGACCACTCAGAAACTGCCTCAACCAGGGATCCATCCCATA  750

seq1  ATCAAATACCAAACCCAGACACTATTGCATATGCCAGCAAGATTTTGCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAATACCAAACCCAGACACTATTGCATATGCCAGCAAGATTTTGCTG  800

seq1  AAAGGACTCTGATATAGCTGTCTCCTGTGAGGCTATGCCAGTGCCTGGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGACTCTGATATAGCTGTCTCCTGTGAGGCTATGCCAGTGCCTGGCA  850

seq1  AATACAGAAGTGGATGTTCACAGTCATCTATTGGATGGAACACAGGGTCC  900
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AATACAGAAGTGGATGTTCACAGTCATCTATTGGATGGAACACA-GGTCC  899

seq1  CAAATGGAGGAGCTAAAGAAAGTACCCAAGGAGCTGAAGAGGTCTGCAAC  950
      || ||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CAGATGGAGGAGCTAAAGAAAGTACCCAAGGAGCTG-AGAGGTCTGCAAC  948

seq1  CCTATAGGTGGAACAACAATATGAACT  977
      ||||||||||||||||| |||||||||
seq2  CCTATAGGTGGAACAAC-ATATGAACT  974