BAC Information

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BAC

Clone NameB6Ng01-252P02
Chromosome4 (Build37)
Map Location 35,996,287 - 36,101,937
singlet/doubletdoublet
Overlap genenone
Upstream geneMobkl2b, Ifnk, 3110043O21Rik, LOC620559, LOC621227, Lingo2
Downstream geneLOC100042132, LOC545600
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-252P02.bB6Ng01-252P02.g
ACCGA059806GA059807
length258962
definitionB6Ng01-252P02.b B6Ng01-252P02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(36,101,680 - 36,101,937)(35,996,287 - 35,997,046)
sequence
acatttcaacgacagaaaagactaaatctagtctgggcaagccaagtgaa
ttttaagtcatttcagatcaagaactaagtcgcagaatagtagtgacctg
gaaatcagtggctcttcagggaaatgaaaatcaaataagccttttaacat
caatctttgaattattcctgtaaggaataatattcctaccttccttcctc
cctccctccctccctccctccctccctctttcttccttccttccttcctt
ccttcctt

gaattcatgaaattatactcagtaaaatattttgatgacattcaggaggc
agctgatacaagtggctttgtttttggaattagccttaactggacatata
aaatgtagcctgaatattgacctttcttattaaacttgtgaaaggcataa
agctaaggtagaaggattgctgcaaacaagttcaaagtcagcctaggttg
tgtagtgaatttaaggatatacagactatttaaaataattatttatttgt
ggtcagcagtagagagaatgagcagcattggcttgaattttatcctagcc
aaatggatggacctggagggcatcatcctgagtgaggtaacacattcaca
aaggaactcacacaatatgtactcactgataagtggatattagcccaaaa
cctaagatacccaagatataagatacaatttcctaaacacatgaaactca
agaaaaatgaagactgaagtgtgaacactatgcccctccttagaagtggg
aacaaaacacccttggaaggagttacagagacaaagtttggagctgagat
aaaaggatggaccatgtagacactaccatatccggggatccatcccataa
tcagcttccaaatgctgacaccattgcatacactagcaagattatgctga
aaggaccctgatatagctgtctcttgtcagagtatgcctgggcctagcaa
atatagaagtggatgctcacagtcggctattggatggatcacatggcccc
caatgaaggagcttgagaaagtaccaaagaagctaaagggatctgcaacc
ctataggtggaacaacattatgaactaaccagtaccccggagctcttgac
tctagctgcatatgcatcaaagatggcctagtcggccatcactggaaaga
gaggcccattggacacgcaactttatatgccccagtacaggggaacgcca
gggccaaaaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_36101680_36101937
seq2: B6Ng01-252P02.b_50_307 (reverse)

seq1  AAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGAGGGAGGGAGGGAGGGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGAGGGAGGGAGGGAGGGAGG  50

seq1  GAGGGAGGGAGGAAGGAAGGTAGGAATATTATTCCTTACAGGAATAATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAGGGAGGAAGGAAGGTAGGAATATTATTCCTTACAGGAATAATTC  100

seq1  AAAGATTGATGTTAAAAGGCTTATTTGATTTTCATTTCCCTGAAGAGCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATTGATGTTAAAAGGCTTATTTGATTTTCATTTCCCTGAAGAGCCA  150

seq1  CTGATTTCCAGGTCACTACTATTCTGCGACTTAGTTCTTGATCTGAAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTCCAGGTCACTACTATTCTGCGACTTAGTTCTTGATCTGAAATG  200

seq1  ACTTAAAATTCACTTGGCTTGCCCAGACTAGATTTAGTCTTTTCTGTCGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAAATTCACTTGGCTTGCCCAGACTAGATTTAGTCTTTTCTGTCGT  250

seq1  TGAAATGT  258
      ||||||||
seq2  TGAAATGT  258


seq1: chr4_35996287_35997046
seq2: B6Ng01-252P02.g_68_827

seq1  GAATTCATGAAATTATACTCAGTAAAATATTTTGATGACATTCAGGAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGAAATTATACTCAGTAAAATATTTTGATGACATTCAGGAGGC  50

seq1  AGCTGATACAAGTGGCTTTGTTTTTGGAATTAGCCTTAACTGGACATATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGATACAAGTGGCTTTGTTTTTGGAATTAGCCTTAACTGGACATATA  100

seq1  AAATGTAGCCTGAATATTGACCTTTCTTATTAAACTTGTGAAAGGCATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTAGCCTGAATATTGACCTTTCTTATTAAACTTGTGAAAGGCATAA  150

seq1  AGCTAAGGTAGAAGGATTGCTGCAAACAAGTTCAAAGTCAGCCTAGGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAGGTAGAAGGATTGCTGCAAACAAGTTCAAAGTCAGCCTAGGTTG  200

seq1  TGTAGTGAATTTAAGGATATACAGACTATTTAAAATAATTATTTATTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTGAATTTAAGGATATACAGACTATTTAAAATAATTATTTATTTGT  250

seq1  GGTCAGCAGTAGAGAGAATGAGCAGCATTGGCTTGAATTTTATCCTAGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGCAGTAGAGAGAATGAGCAGCATTGGCTTGAATTTTATCCTAGCC  300

seq1  AAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACA  350

seq1  AAGGAACTCACACAATATGTACTCACTGATAAGTGGATATTAGCCCAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAACTCACACAATATGTACTCACTGATAAGTGGATATTAGCCCAAAA  400

seq1  CCTAAGATACCCAAGATATAAGATACAATTTCCTAAACACATGAAACTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAGATACCCAAGATATAAGATACAATTTCCTAAACACATGAAACTCA  450

seq1  AGAAAAATGAAGACTGAAGTGTGAACACTATGCCCCTCCTTAGAAGTGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAATGAAGACTGAAGTGTGAACACTATGCCCCTCCTTAGAAGTGGG  500

seq1  AACAAAACACCCTTGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAACACCCTTGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGAT  550

seq1  AAAAGGATGGACCATGTAGACACTACCATATCCGGGGATCCATCCCATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGATGGACCATGTAGACACTACCATATCCGGGGATCCATCCCATAA  600

seq1  TCAGCTTCCAAATGCTGACACCATTGCATACACTAGCAAGATTATGCTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTTCCAAATGCTGACACCATTGCATACACTAGCAAGATTATGCTGA  650

seq1  AAGGACCCTGATATAGCTGTCTCTTGTCAGAGTATGCCTGGGCCTAGCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACCCTGATATAGCTGTCTCTTGTCAGAGTATGCCTGGGCCTAGCAA  700

seq1  ATATAGAAGTGGATGCTCACAGTCGGCTATTGGATGGATCACATGGCCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGAAGTGGATGCTCACAGTCGGCTATTGGATGGATCACATGGCCCC  750

seq1  CAATGAAGGA  760
      ||||||||||
seq2  CAATGAAGGA  760


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