BAC Information

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BAC

Clone NameB6Ng01-253A21
Chromosome4 (Build37)
Map Location 83,222,111 - 83,222,941
singlet/doubletsinglet
Overlap gene4930473A06Rik
Upstream geneZdhhc21, Cer1, Frem1, LOC667985, 1810054D07Rik, Snapc3, Psip1, LOC100040611
Downstream geneLOC668010, Bnc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-253A21.bB6Ng01-253A21.g
ACCGA059890GA059891
length1,173434
definitionB6Ng01-253A21.b B6Ng01-253A21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctcttttagcacaaggcttagctataacattaagcttgctagt
gtttttttcctttccaagttacatgttgtagttctttttgccccactttt
ttgcccttttcattgtaaagaagagtgattactcgtaaccatgggacaga
gtcaatattaggatgtcttgaaatttccagcaaagaaatctgactattaa
tttgaaaatgaaacaacaggcaagttcttaggacaaagtcagacagtggt
tacttctcccctgcccccaccccccaccccccaatcacaggaatgatcta
tggcccaattgctagtgaaagtgtctgagctcagctccatggtctgcatt
gctcccagaactgtcttttaggaccctagtagacatcccattaagccgtt
cttacagctctcagctcctttttattccaagtcccaaagtctgtcacatt
cttccaaaacccctcacatggccaggttcttttagtactactgcactcct
gggactcactgctgtctcaatttggcttctgttgtgacaaaacaccgtga
ccaaggcaactaacttacagaaggaagagtttattttgagctatggttcc
gttgagataagagtttatcaccatggctggggaatgtggcagcatgcaga
catggcatcaggaacatctgagggctcatgtcttgaactgcaagcagagg
tcagagggcttttgcagcctcagtgacatacttcctccagtgaggccaca
tgccctaacctacttaaatagtcctaccaactggagagcaggcagtcaag
cacccgagcctccaagaggcattcttatgaacacttctgtttatggcata
acacatgtgcagagtgagatgataatgtcgggagtcagttctttccttct
gccttgattgggatccctcctgtatctgctgcactgtgttctccagctta
ccttgctcatgagctgatgatgatcctcctgtcttgcctcctctttccac
ctttaggaatgggggcaccacacaccacagaaggcagacacaccacagga
ccacccattattcccccgagcatcccccccctcaaggtcaatatgaaccc
cttctgaaggtgctacttcaaaacaaaaacaactaaacccacataaatgg
caatggttgaagtcctagaatga

gaattctttactccattgaccacagcgtcagggaagaaatagagaaagaa
attaatatttttctagagctcaatgaaaatgaaggcacaacctacccaaa
cttatgggacacaataaaagcagtgttaagagaaaatctcatgctattaa
gtgccttcacaaaggaattggagatatttcatactggcaatttaaaagcg
cacgtgaaagctctagaacaaaaagaagcaaacacacccaagagaagtag
atggaggaaacaatcaaactcagagctgaaatcaataaatcaagaaacaa
acagaacaacacaatcaacaaaaccaagagctggttctttgagaaaatca
acaagatagattagccaaactaactaaaaggcagagagagagaggagaga
ggagagaggagagagagagagagagagagagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_83222111_83222941
seq2: B6Ng01-253A21.b_371_1215

seq1  GCTCAGCTCCATGGTCTGCATTGCTCCCAGAACTGTCTTTTAGGACCCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGCTCCATGGTCTGCATTGCTCCCAGAACTGTCTTTTAGGACCCTA  50

seq1  GTAGACATCCCATTAAGCCGTTCTTACAGCTCTCAGCTCCTTTTTATTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACATCCCATTAAGCCGTTCTTACAGCTCTCAGCTCCTTTTTATTCC  100

seq1  AAGTCCCAAAGTCTGTCACATTCTTCCAAAACCCCTCACATGGCCAGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCCAAAGTCTGTCACATTCTTCCAAAACCCCTCACATGGCCAGGTT  150

seq1  CTTTTAGTACTACTGCACTCCTGGGACTCACTGCTGTCTCAATTTGGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAGTACTACTGCACTCCTGGGACTCACTGCTGTCTCAATTTGGCTT  200

seq1  CTGTTGTGACAAAACACCGTGACCAAGGCAACTAACTTACAGAAGGAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGTGACAAAACACCGTGACCAAGGCAACTAACTTACAGAAGGAAGA  250

seq1  GTTTATTTTGAGCTATGGTTCCGTTGAGATAAGAGTTTATCACCATGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTTTGAGCTATGGTTCCGTTGAGATAAGAGTTTATCACCATGGCT  300

seq1  GGGGAATGTGGCAGCATGCAGACATGGCATCAGGAACATCTGAGGGCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAATGTGGCAGCATGCAGACATGGCATCAGGAACATCTGAGGGCTCA  350

seq1  TGTCTTGAACTGCAAGCAGAGGTCAGAGGGCTTTTGCAGCCTCAGTGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTGAACTGCAAGCAGAGGTCAGAGGGCTTTTGCAGCCTCAGTGACA  400

seq1  TACTTCCTCCAGTGAGGCCACATGCCCTAACCTACTTAAATAGTCCTACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCCTCCAGTGAGGCCACATGCCCTAACCTACTTAAATAGTCCTACC  450

seq1  AACTGGAGAGCAGGCAGTCAAGCACCCGAGCCTCCAAGAGGCATTCTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGAGAGCAGGCAGTCAAGCACCCGAGCCTCCAAGAGGCATTCTTAT  500

seq1  GAACACTTCTGTTTATGGCATAACACATGTGCAGAGTGAGATGATAATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACTTCTGTTTATGGCATAACACATGTGCAGAGTGAGATGATAATGT  550

seq1  CGGGAGTCAGTTCTTTCCTTCTGCCTTGATTGGGATCCCTCCTGTATCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGAGTCAGTTCTTTCCTTCTGCCTTGATTGGGATCCCTCCTGTATCTG  600

seq1  CTGCACTGTGTTCTCCAGCTTACCTTGCTCATGAGCTGATGATGATCCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACTGTGTTCTCCAGCTTACCTTGCTCATGAGCTGATGATGATCCTC  650

seq1  CTGTC-TGCCT-CTCTTTCCACC-TTAGGAATGGGGGCA-CACACA-CAC  695
      ||||| ||||| ||||||||||| ||||||||||||||| |||||| |||
seq2  CTGTCTTGCCTCCTCTTTCCACCTTTAGGAATGGGGGCACCACACACCAC  700

seq1  AG-AGGCAGACACA-CACAG--ACACACAT--ATCCCCCAAGCAT--CCC  737
      || ||||||||||| |||||   ||| |||   |||||| |||||  |||
seq2  AGAAGGCAGACACACCACAGGACCACCCATTATTCCCCCGAGCATCCCCC  750

seq1  CCCTCAA-GTC-ATATGA--CCCCTCTGAAGTGCCTAACTTCAAAACAAA  783
      ||||||| ||| ||||||  ||| |||||||   || |||||||||||||
seq2  CCCTCAAGGTCAATATGAACCCCTTCTGAAGGTGCT-ACTTCAAAACAAA  799

seq1  ACAAAACAAAAACCCACATAA--TGAAATTGTTGAAGTACTAAAGAATGA  831
      | | |||  ||||||||||||   | ||| |||||||| ||  |||||||
seq2  A-ACAAC-TAAACCCACATAAATGGCAATGGTTGAAGTCCT--AGAATGA  845


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