BAC Information

Click to search

BAC

Clone NameB6Ng01-253D09
Chromosome4 (Build37)
Map Location 78,154,092 - 78,154,534
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039974, LOC100039996
Downstream geneLOC100040026, LOC100040036, LOC667922
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-253D09.bB6Ng01-253D09.g
ACCGA060008GA060009
length163437
definitionB6Ng01-253D09.b B6Ng01-253D09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacaagaagcaaattccttgaggacaaaagaatcattcttctaga
cttggccattgggacttttcatactccagagaatggaaccagaatcacac
aattaaaggcaggactaattgcacatactggggaagaaaaggaggaggag
gaggaggaggagg
tccattgatttgaaagaggtatatactgaactttcagcttaaaatgttta
atataatgcacgtacatttctaagaatcatttttcataaactttatataa
tttatggtactgtgacatgtttaggctttcttgttttatcattatctttt
tcactatagaaaaatactcaatatcctatattaatatcttatagcaatgg
gtctatatttttccaaaaatgtccatttatatccttatcattaaaataac
tttatgttaatcaaaatatctctgcataatataaactgtaaaaaatactt
cctgactgttataaatttgtttttcaaaactcttaatacacaaatggtaa
atactatatttttatcatatgtgatatatatatgtatatatatgtgtgta
tatatatatacgtttattgatgaatgtatgtatgtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_78154092_78154534
seq2: B6Ng01-253D09.g_66_508 (reverse)

seq1  TCACATACATACATTCATCAATAAACGTATATATATATACACACATATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATACATACATTCATCAATAAACGTATATATATATACACACATATAT  50

seq1  ATACATATATATATCACATATGATAAAAATATAGTATTTACCATTTGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATATATATATCACATATGATAAAAATATAGTATTTACCATTTGTGT  100

seq1  ATTAAGAGTTTTGAAAAACAAATTTATAACAGTCAGGAAGTATTTTTTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGAGTTTTGAAAAACAAATTTATAACAGTCAGGAAGTATTTTTTAC  150

seq1  AGTTTATATTATGCAGAGATATTTTGATTAACATAAAGTTATTTTAATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTATATTATGCAGAGATATTTTGATTAACATAAAGTTATTTTAATGA  200

seq1  TAAGGATATAAATGGACATTTTTGGAAAAATATAGACCCATTGCTATAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGATATAAATGGACATTTTTGGAAAAATATAGACCCATTGCTATAAG  250

seq1  ATATTAATATAGGATATTGAGTATTTTTCTATAGTGAAAAAGATAATGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAATATAGGATATTGAGTATTTTTCTATAGTGAAAAAGATAATGAT  300

seq1  AAAACAAGAAAGCCTAAACATGTCACAGTACCATAAATTATATAAAGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAGAAAGCCTAAACATGTCACAGTACCATAAATTATATAAAGTTT  350

seq1  ATGAAAAATGATTCTTAGAAATGTACGTGCATTATATTAAACATTTTAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAAATGATTCTTAGAAATGTACGTGCATTATATTAAACATTTTAAG  400

seq1  CTGAAAGTTCAGTATATACCTCTTTCAAATCAATGGAGAATTC  443
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAGTTCAGTATATACCTCTTTCAAATCAATGGAGAATTC  443