BAC Information

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BAC

Clone NameB6Ng01-254B03
Chromosome4 (Build37)
Map Location 30,491,161 - 30,632,197
singlet/doubletdoublet
Overlap geneLOC619906
Upstream geneLOC665185
Downstream geneLOC100040864, LOC100040891
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-254B03.bB6Ng01-254B03.g
ACCGA060635GA060636
length1,1081,166
definitionB6Ng01-254B03.b B6Ng01-254B03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(30,631,092 - 30,632,197)(30,491,161 - 30,492,204)
sequence
gaattcaaccgatgaattgggcagtataaacagcattgctccctcccttg
tatttatctgcaaagtaagtattcatggcacatccacaatatgttagatt
gttgttggagctgaggacagaacattgaaataagtatttgctcttatggg
tgtttcatatcagaacaagaacatcaggtaaataaaaaaattcaaagtaa
ttttcttatgatatttttatcgattatttgagaacgtcatatcaggaacc
ctgagcgcactgttcagtccttttagatctgtgcaccccctatgaccact
ctctcaaaaaagaagaagaagaagaagaagaagaagaagaagaagaagaa
gaagaagaagaagaagaagaagaagaagaagaagaagaaaaatgcaagtc
taatttgtgttacccatatactcactggagcatggtcaaactcccagtgg
ccaggcccttagataaaactgaattttccctcatcttcactcttgtcaaa
agtcatcagttgtagcatccttatcacaatttctaagaatttgctttgat
ggctttctgtcccagctgtcactttggggggtgggagcagtgttggtggt
tgtcacaaggaccttctatgttcctctttctcaactgtgagctgcagtca
atatcatggcaagagtagcttccttaagtacccaaggagcttaagggttt
tgcagtcccataggagaaacaacaatatgaactatccagtacccccagag
ctccctgggactaaaccaccaatcaaagatgaatatatgtgatatgtaaa
gtcattacagatcatctcaaaggattatgggactgagaaatctgaccaga
cattagcaagaggaaatagtgtaaattacatcccatacttaaaaaccaag
agcaatgaaggtttcatcctgagtccatagcccaggattagttaacaaca
ggtaaaggcagactgatcagcattactccccgtgtttattatgtttgtcc
attttagtattcagctcactagatgatatcactatggagattgagtttct
tcctaaaattcacctcagtgaaaataagaaatcattggattgatggtgct
tagcagat

gaattccagggaaaggatggcatcaacaagacaacaggaatgataagtgt
atggactcacggaatgcatagctctgcacaagttgaagtctacctagctc
ctgtcactaaaagaacatagtagataagaacccccatccctaatcaagta
gctatctctaactgactgccacttgcaaaggaaagattacttttctccag
tagaatctcacttgatatataaactacacttaagggcataccctatgcca
gcaatagatggccaacataaaaggaactctgttgtgtttttgtagaatgt
tgtcatatattatttacttggaattttttttataattttacttgcgtttt
ggttttaattatggtttctgattttgtccttttgtatattttgtgcacac
atgagctcatacacaatggtatgtttctactgctttttttttttaatttt
gatttttgtattgtatactttggcttgtatttttatttgcctgtttattt
tctaaaaggaaaaaaaaatcagaaaccttgggtttggatggatccaggaa
aatggggaaaatcttggaggagttagggaaaaagaaatcctgttcagaat
atactatataaaaattcttagtttaagatatttattttactttttaaaaa
tgagacattatatgtcacagcagatacttcatgaaggtgagtgtttttca
caggaataacatagaccatgaggagatctttacaagtgctctgatcttag
aattaaatggaaaattgtagcaggaagaatgatataatcctagagtattg
ggctaattaattatacagctgaagcagaaggataatgaggccagaacttt
aagatcagattgttctacaaaatgagaccttacttcaaacaagaagggat
tcctttttaccccaaatccaaaatatcctctcctaacaagtggaagacca
tcaacagaaaaccacaagtggcaataatgcaaaacaataatggatcatgg
agagctaagactcagtgagcaattctaccttccagcttctgcgtttatgg
ctcaaggaaacatcgtttaaaagaagctgtagactagaataccagaatac
tgtactaataaaagaatcatttctagaaggtctgagcaacaagacctgat
caaatgaacaatatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_30631092_30632197
seq2: B6Ng01-254B03.b_44_1151 (reverse)

seq1  ATCTGCT-AGCACCATTCAAT-CAATGATTTC-TATTTTCACTGA-GTGA  46
      ||||||| ||||||| ||||| |||||||||| |||||||||||| ||||
seq2  ATCTGCTAAGCACCA-TCAATCCAATGATTTCTTATTTTCACTGAGGTGA  49

seq1  ATTTTAGGGAAGAAACTCAATCT-CATAGTTGATATCATCTAGTGAGCTG  95
      |||||| |||||||||||||||| ||||| ||||||||||||||||||||
seq2  ATTTTA-GGAAGAAACTCAATCTCCATAG-TGATATCATCTAGTGAGCTG  97

seq1  AATACCTAAAATGGACAAACAT-ATAAACACGGGGAGTAATGCTGATCAG  144
      |||| ||||||||||||||||| |||||||||||||||||||||||||||
seq2  AATA-CTAAAATGGACAAACATAATAAACACGGGGAGTAATGCTGATCAG  146

seq1  TCTGCCTTTACCTGTTGTTAACTAATCCTGGCCTATGGACTCAGGATGAA  194
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TCTGCCTTTACCTGTTGTTAACTAATCCTGGGCTATGGACTCAGGATGAA  196

seq1  ACCTTCATTGCTCTTGGTTTTTAAGTATGGGATGTAATTTACACTATTTC  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCATTGCTCTTGGTTTTTAAGTATGGGATGTAATTTACACTATTTC  246

seq1  CTCTTGCTAATGTCTGGTCAGATTTCTCAGTCCCATAATCCTTTGAGATG  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGCTAATGTCTGGTCAGATTTCTCAGTCCCATAATCCTTTGAGATG  296

seq1  ATCTGTAATGACTTTACATATCACATATATTCATCTTTGATTGGTGGTTT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTAATGACTTTACATATCACATATATTCATCTTTGATTGGTGGTTT  346

seq1  AGTCCCAGGGAGCTCTGGGGGTACTGGATAGTTCATATTGTTGTTTCTCC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCAGGGAGCTCTGGGGGTACTGGATAGTTCATATTGTTGTTTCTCC  396

seq1  TATGGGACTGCAAAACCCTTAAGCTCCTTGGGTACTTAAGGAAGCTACTC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGACTGCAAAACCCTTAAGCTCCTTGGGTACTTAAGGAAGCTACTC  446

seq1  TTGCCATGATATTGACTGCAGCTCACAGTTGAGAAAGAGGAACATAGAAG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCATGATATTGACTGCAGCTCACAGTTGAGAAAGAGGAACATAGAAG  496

seq1  GTCCTTGTGACAACCACCAACACTGCTCCCACCCCCCAAAGTGACAGCTG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTGTGACAACCACCAACACTGCTCCCACCCCCCAAAGTGACAGCTG  546

seq1  GGACAGAAAGCCATCAAAGCAAATTCTTAGAAATTGTGATAAGGATGCTA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGAAAGCCATCAAAGCAAATTCTTAGAAATTGTGATAAGGATGCTA  596

seq1  CAACTGATGACTTTTGACAAGAGTGAAGATGAGGGAAAATTCAGTTTTAT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGATGACTTTTGACAAGAGTGAAGATGAGGGAAAATTCAGTTTTAT  646

seq1  CTAAGGGCCTGGCCACTGGGAGTTTGACCATGCTCCAGTGAGTATATGGG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGGCCTGGCCACTGGGAGTTTGACCATGCTCCAGTGAGTATATGGG  696

seq1  TAACACAAATTAGACTTGCATTTTTCTTCTTCTTCTTCTTCTTCTTCTTC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACAAATTAGACTTGCATTTTTCTTCTTCTTCTTCTTCTTCTTCTTC  746

seq1  TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT  796

seq1  CTTTTTTGAGAGAGTGGTCATAGGGGGTGCACAGATCTAAAAGGACTGAA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTGAGAGAGTGGTCATAGGGGGTGCACAGATCTAAAAGGACTGAA  846

seq1  CAGTGCGCTCAGGGTTCCTGATATGACGTTCTCAAATAATCGATAAAAAT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCGCTCAGGGTTCCTGATATGACGTTCTCAAATAATCGATAAAAAT  896

seq1  ATCATAAGAAAATTACTTTGAATTTTTTTATTTACCTGATGTTCTTGTTC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATAAGAAAATTACTTTGAATTTTTTTATTTACCTGATGTTCTTGTTC  946

seq1  TGATATGAAACACCCATAAGAGCAAATACTTATTTCAATGTTCTGTCCTC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATGAAACACCCATAAGAGCAAATACTTATTTCAATGTTCTGTCCTC  996

seq1  AGCTCCAACAACAATCTAACATATTGTGGATGTGCCATGAATACTTACTT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCAACAACAATCTAACATATTGTGGATGTGCCATGAATACTTACTT  1046

seq1  TGCAGATAAATACAAGGGAGGGAGCAATGCTGTTTATACTGCCCAATTCA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGATAAATACAAGGGAGGGAGCAATGCTGTTTATACTGCCCAATTCA  1096

seq1  TCGGTTGAATTC  1106
      ||||||||||||
seq2  TCGGTTGAATTC  1108


seq1: chr4_30491161_30492204
seq2: B6Ng01-254B03.g_186_1233

seq1  AGTAGATAAGAACCCCCATCCCTAATCAAGTAGCTATCTCTAACTGACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGATAAGAACCCCCATCCCTAATCAAGTAGCTATCTCTAACTGACTG  50

seq1  CCACTTGCAAAGGAAAGATTACTTTTCTCCAGTAGAATCTCACTTGATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTGCAAAGGAAAGATTACTTTTCTCCAGTAGAATCTCACTTGATAT  100

seq1  ATAAACTACACTTAAGGGCATACCCTATGCCAGCAATAGATGGCCAACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACTACACTTAAGGGCATACCCTATGCCAGCAATAGATGGCCAACAT  150

seq1  AAAAGGAACTCTGTTGTGTTTTTGTAGAATGTTGTCATATATTATTTACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAACTCTGTTGTGTTTTTGTAGAATGTTGTCATATATTATTTACT  200

seq1  TGGAATTTTTTTTATAATTTTACTTGCGTTTTGGTTTTAATTATGGTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATTTTTTTTATAATTTTACTTGCGTTTTGGTTTTAATTATGGTTTC  250

seq1  TGATTTTGTCCTTTTGTATATTTTGTGCACACATGAGCTCATACACAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTGTCCTTTTGTATATTTTGTGCACACATGAGCTCATACACAATG  300

seq1  GTATGTTTCTACTGCTTTTTTTTTTTAATTTTGATTTTTGTATTGTATAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTTTCTACTGCTTTTTTTTTTTAATTTTGATTTTTGTATTGTATAC  350

seq1  TTTGGCTTGTATTTTTATTTGCCTGTTTATTTTCTAAAAGGAAAAAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCTTGTATTTTTATTTGCCTGTTTATTTTCTAAAAGGAAAAAAAAA  400

seq1  TCAGAAACCTTGGGTTTGGATGGATCCAGGAAAATGGGGAAAATCTTGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAACCTTGGGTTTGGATGGATCCAGGAAAATGGGGAAAATCTTGGA  450

seq1  GGAGTTAGGGAAAAAGAAATCCTGTTCAGAATATACTATATAAAAATTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTAGGGAAAAAGAAATCCTGTTCAGAATATACTATATAAAAATTCT  500

seq1  TAGTTTAAGATATTTATTTTACTTTTTAAAAATGAGACATTATATGTCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTAAGATATTTATTTTACTTTTTAAAAATGAGACATTATATGTCAC  550

seq1  AGCAGATACTTCATGAAGGTGAGTGTTTTTCACAGGAATAACATAGACCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGATACTTCATGAAGGTGAGTGTTTTTCACAGGAATAACATAGACCA  600

seq1  TGAGGAGATCTTTACAAGTGCTCTGATCTTAGAATTAAATGGAAAATTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAGATCTTTACAAGTGCTCTGATCTTAGAATTAAATGGAAAATTGT  650

seq1  AGCAGGAAGAATGATATAATCCTAGAGTATT-GGCTAATTAATTATACAG  699
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AGCAGGAAGAATGATATAATCCTAGAGTATTGGGCTAATTAATTATACAG  700

seq1  CTGAAGCAGAAGGATAATGAGGCCAGAACTTTAAGATCAGATTGTTCTAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGCAGAAGGATAATGAGGCCAGAACTTTAAGATCAGATTGTTCTAC  750

seq1  AAAATGAGACCTTACTTCAAACAAGAAGGAATTCC-TTTTACCCCAAATC  798
      ||||||||||||||||||||||||||||| ||||| ||||||||||||||
seq2  AAAATGAGACCTTACTTCAAACAAGAAGGGATTCCTTTTTACCCCAAATC  800

seq1  CAAAATATCCTCTCCTTACAAGTGG-AGACCATC-ACAGAAAACCACAAG  846
      |||||||||||||||| |||||||| |||||||| |||||||||||||||
seq2  CAAAATATCCTCTCCTAACAAGTGGAAGACCATCAACAGAAAACCACAAG  850

seq1  TGGCAATAATGC-AAACAATAATGGATCATGGAGAGCTAAGACTCAGTGA  895
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TGGCAATAATGCAAAACAATAATGGATCATGGAGAGCTAAGACTCAGTGA  900

seq1  GCAATTCTACCTCCCAGCTTCTGCGTTTATGGCTC-AGGGAACATCGTTT  944
      |||||||||||| |||||||||||||||||||||| ||| ||||||||||
seq2  GCAATTCTACCTTCCAGCTTCTGCGTTTATGGCTCAAGGAAACATCGTTT  950

seq1  AAAAGAAAGCCTGTAAAGACTAGAATACCAGGATACTG-ACT-ATAAAAG  992
      |||||||   ||||  ||||||||||||||| |||||| ||| |||||||
seq2  AAAAGAA--GCTGT--AGACTAGAATACCAGAATACTGTACTAATAAAAG  996

seq1  AATCATTCCTAGAAAGGTCTGAGCAAACAAGACCTGATC-AATG-ACAAT  1040
      ||||||| |||| ||||||||||| |||||||||||||| |||| |||||
seq2  AATCATTTCTAG-AAGGTCTGAGC-AACAAGACCTGATCAAATGAACAAT  1044

seq1  ATCA  1044
      ||||
seq2  ATCA  1048


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