BAC Information

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BAC

Clone NameB6Ng01-254C04
Chromosome4 (Build37)
Map Location 75,158,081 - 75,158,905
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039814, LOC636847, 3110001D03Rik, LOC623529, LOC100039833
Downstream geneLOC100039884, LOC667845, Ptprd
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-254C04.bB6Ng01-254C04.g
ACCGA060683GA060684
length1,2001,062
definitionB6Ng01-254C04.b B6Ng01-254C04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcttctgtgaagaagattcaattcctaacatgaagccattggtt
atctcaaaatagcaatgccactcttgcatcaatacgcatcttcttgtgca
tgtcacatttatattggactatataatacacaccactgggtaatagtatt
gatgtactttctccactatatacctaaattgaaccttcttgcattatgaa
atccagctatcaggaagtttcattattagtttgagattgatttatttatg
ctctgcagcctgaatgtgtggggagcgggtgtggcggcagtcccaaaggc
gccagggactgcagctaagtcatatgacttgcacctgacttcctcatata
agacacaaacatcttgagtgctgcgcaggtgtaccaggatacaggtgaat
ccaatttgatggagatatgcccctgctgccctgattagctgaagctgcgt
gcctggtgaggtagcgtggcctgctgtgcgtggatgggaactgagagtat
aaaagagtgagaggcccagggttcgagggagatataaaaacaagggagat
ataaacaagggagatataaacaagggagatataaacaagggagatataaa
caagaagaaacaggactgaataaatgtgtgcagaaggatcctgtagcagc
gtcgttcttcctggccagttgagcgtgcgcaacatgaatgtatgacatct
ttagcaataggatctcaacatcctgtgctgttcaacagaactcatgtgcc
tctctgaataataactactaaggaggtattacatgccttatatgaaatct
ttatgtagttaccatattccctaggaatagcattgcttgtatggtgctat
gcaggtatgattaatttagctcctgttttcttaaaattatattttgagat
cattaccaactagtgggtttccctaagactttttgacatattcttagttt
tgttagccccttcccccacttttccccatatatcatgccttcacatctcc
actaaatcatctccctttcttttataccacatgtctctactattttttca
tagtacatttttaatagggttctcaggtagaggtcattggcttttagtac
ctcttagttacctctctattccactctgatccttcaccgtcctggcatcc
tagctaagcttccctggaagacattcactttctacccttgttatttcatc


gaattctttgtttagctctgagccccattttttaatggggttatttgatt
ttctggagtccactttcttgagttctttatatatattggatattagtgcc
ctatccgatttgggataggtaaagatactttgccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaagctttgcaacttta
tgaggtcccatttatcgattctcaatcttacagcacaagccattgctgtt
ctattcaggaatttttcccgtgtatccatatcttcgaggcttttccctac
tttctcctctataagtttcagtttctctggttttatgtggagttccttaa
tccacttagatttgaccttagtacaaggagataggaatggatcaattcgc
attcttttgcatgataaccaccagttgtgccagcaccatttgttgaaaat
gctgtcttttttccactgaatggttttagctcccttgtggaagatcaagt
gaccataggtgtgtgtgtttatctctgggtcttcaattctattccattgt
tctacttgtatgttgctataccagtaccatgcagtttttatcacaactgc
tctgtagtacagctttaggtcaggcattgtgattccaccagaggttcttt
tatccttgagaagagtttttgctaacctaggttttttgttactccagagg
aatttgaagattgccctttcatacagacaaagccaaggaatgactaagag
agccagcaattcaagaaatgattgcaagaattggcgaaagggattgaatg
gttcgttaaaacttctaaacaacaaaataaactttcgacagagtggagaa
aatttttatagcgtaggagacatatttggtcacgtaaacaaataacttag
gattgatacatagaatctataagagactaaaaagtttcaaatattatata
agcatcacctggacaaattaattgaacagacagctctcagaacaaataaa
attattcataaaaatacattcagtacaaagtttaccattatagcctagaa
gatttcatttaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_75158081_75158905
seq2: B6Ng01-254C04.g_288_1112

seq1  CTCAATCTTACAGCACAAGCCATTGCTGTTCTATTCAGGAATTTTTCCCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATCTTACAGCACAAGCCATTGCTGTTCTATTCAGGAATTTTTCCCG  50

seq1  TGTATCCATATCTTCGAGGCTTTTCCCTACTTTCTCCTCTATAAGTTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCCATATCTTCGAGGCTTTTCCCTACTTTCTCCTCTATAAGTTTCA  100

seq1  GTTTCTCTGGTTTTATGTGGAGTTCCTTAATCCACTTAGATTTGACCTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTCTGGTTTTATGTGGAGTTCCTTAATCCACTTAGATTTGACCTTA  150

seq1  GTACAAGGAGATAGGAATGGATCAATTCGCATTCTTTTGCATGATAACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAAGGAGATAGGAATGGATCAATTCGCATTCTTTTGCATGATAACCA  200

seq1  CCAGTTGTGCCAGCACCATTTGTTGAAAATGCTGTCTTTTTTCCACTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTGTGCCAGCACCATTTGTTGAAAATGCTGTCTTTTTTCCACTGAA  250

seq1  TGGTTTTAGCTCCCTTGTGGAAGATCAAGTGACCATAGGTGTGTGTGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTAGCTCCCTTGTGGAAGATCAAGTGACCATAGGTGTGTGTGTTT  300

seq1  ATCTCTGGGTCTTCAATTCTATTCCATTGTTCTACTTGTATGTTGCTATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGGGTCTTCAATTCTATTCCATTGTTCTACTTGTATGTTGCTATA  350

seq1  CCAGTACCATGCAGTTTTTATCACAACTGCTCTGTAGTACAGCTTTAGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTACCATGCAGTTTTTATCACAACTGCTCTGTAGTACAGCTTTAGGT  400

seq1  CAGGCATTGTGATTCCACCAGAGGTTCTTTTATCCTTGAGAAGAGTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCATTGTGATTCCACCAGAGGTTCTTTTATCCTTGAGAAGAGTTTTT  450

seq1  GCTAACCTAGGTTTTTTGTTACTCCAGAGGAATTTGAAGATTGCCCTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAACCTAGGTTTTTTGTTACTCCAGAGGAATTTGAAGATTGCCCTTTC  500

seq1  ATACAGACAAAGCCAAGGAATGACTAAGAGAGCCAGCAATTCAAGAAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGACAAAGCCAAGGAATGACTAAGAGAGCCAGCAATTCAAGAAATG  550

seq1  ATTGCAAGAATTGGCGAAAGGGATTGAATGGTTCGTTAAAACTTCTAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCAAGAATTGGCGAAAGGGATTGAATGGTTCGTTAAAACTTCTAAAC  600

seq1  AACAAAATAAACTTTCGACAGAGTGGAGAAAAATTTTATAGCGTAGGAGA  650
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AACAAAATAAACTTTCGACAGAGTGGAGAAAATTTTTATAGCGTAGGAGA  650

seq1  CATATTTGGTCACGTAAACAAATAACTTAGGATTGATACATAGAATCTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTGGTCACGTAAACAAATAACTTAGGATTGATACATAGAATCTAT  700

seq1  AAGAGACTAAAAAGTTTCAAATATTATATAAGCATCACCTGGACAAATTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGACTAAAAAGTTTCAAATATTATATAAGCATCACCTGGACAAATTA  750

seq1  ATTGAACAGACAGCTCTCAGAACAAATAAAATTATTCATAAAAATACA-T  799
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ATTGAACAGACAGCTCTCAGAACAAATAAAATTATTCATAAAAATACATT  800

seq1  CAGTACAAAGTTTACCATTAATAGCC  825
      ||||||||||||||||||| ||||||
seq2  CAGTACAAAGTTTACCATT-ATAGCC  825


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