BAC Information

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BAC

Clone NameB6Ng01-254C10
Chromosome4 (Build37)
Map Location 119,719,077 - 119,896,892
singlet/doubletdoublet
Overlap geneHivep3, Edn2
Upstream geneOTTMUSG00000008833, Slc2a1, Zfp691, Ermap, Ccdc23, 4930538K18Rik, AU022252, Lepre1, Cldn19, Ybx1, Ppih, 1700041C02Rik, Ldha-ps2, LOC100041471, Ppcs, Zmynd12, BC057371, LOC666766, LOC384052, AA415398, Foxj3, Guca2a, Guca2b
Downstream geneFoxo6, Scmh1, Slfnl1, Ctps, EG667063, Cited4, Kcnq4, Nfyc, Rims3, LOC626489, 3110037I16Rik, Zfp69, Smap1l, Col9a2, Zmpste24, Tmco2, LOC100042174, Rlf
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-254C10.bB6Ng01-254C10.g
ACCGA060695GA060696
length1,196868
definitionB6Ng01-254C10.b B6Ng01-254C10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,895,713 - 119,896,892)(119,719,077 - 119,719,942)
sequence
gaattcagagtttggccagggcatgggctggaggtgcagggtgggtgcaa
ggtgaacgggaggtagcatgtggtggacctggtgtgggatatggtctcta
aggtgggagagaagaattgccagagaggccagggagttcagccttggact
ggcaccggcagggctgctacacactgggtgttccatgtcgctcactcaga
gtgacgcacacacacataagcatacacacccaacttcccccagggtgcct
ggctagcacccagctcaacagctgacagggaaggctcaggaaaggcctgg
caggcagtggctgcacactgctccacccaagccccacccaaaccctaagt
cacaagccctgggtctcgccttcaggcctgggcacttggtgtctctagga
gactgggggcatgctgggttccgtcctatctacctctacccaggctccct
ggggaataccagataaaccccaggcacgatacccctcttaatagtgacct
taaaacacacacttcccccttccagtattgtggcccctgcccacagcctg
gcatctctcttctaggtccctccccactgcagaacagaaagtcaagtgga
tcccatctgtcttttagagaactgaggtctctaacccccagctggtacct
tgcctactgagtctgtgaagaaagacatcatgaacattcctaggcacacc
ctgtctgactgcatagcttatccaggctccctggagtcccagcttcctta
caggtccagtggggctagacggcccccacatggcagatccaggttgggtc
agtccctatggtggccaatgggtacactcctctgaaggtgaaggccttct
ctcctcctgtcagggttcacctgtggtatggggtctcctgtcagagctct
ctgggtcccctccttcagggcccctcattggcaggctgcccagctgctct
tccaggctaatttagttattttcaagcaagatgtgcagggtagattagtg
agcacttggctgcaaagccatgatcggtggccagtccccagcccccgtcc
ctgggtgcccagcagccccggaattgccattgagtacagcctcctggacg
ggaacatctggctgcaacactgggggttaaccatactgcaccttcttctc
tccaatcctagagcctactcccacgggctctctcccaggggtgtga
gaattcccatcatataacagaggggcaaaattgaaggtatcttgagtcac
atgtggctttgcagggagcaagttggaaatttttcattggcatctgtcat
tgttgccaatgtgtctcctcccctcccccaccacacacaccctcctccct
gggttagatttgtagctgcagcctcagggctttgcagcctggagaaggca
gtgtgacccgaccatttctcctctccggtctccatttctcactcccagtc
ctcccaggtaaagactagataagccgatgcagagttccttagcacttgcc
cagctcagtacccagacgttcatgtcctcgactgaactagatgtgaggtc
agaatcaacggtggtggggtgctcctgagaccacctagaacagcgctgcc
tgcgtgctcagccttactacaggggactctggttctcaggagcactcagg
aagagcctgggaggaggaacattttgctgagcgttaccaacaagcttctc
aagactggaagaaaaagagggtgggcacagggtagaggtagagctggcgg
cccacggggagaacagtcccctggctgtggctcttcatgagtgccagagg
ctggcccaggtccatccccagaccttagaattgggtacaagatcagaact
gtatcccagtagctggcagcaagaaggtagagaagaaacagttggaagct
ggtagaggtgcagctagggaggaggctccgccctgcagcctgatcctcgg
gtaccaatcactgcccttgcatcgtctccctggagccaggctgcagagga
ctgttttcccaagtctgggagagggcctccggtggggccttcccccatgg
ggtggtagggaggagtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_119895713_119896892
seq2: B6Ng01-254C10.b_51_1246 (reverse)

seq1  TCACACCC--GGGAGAG---CCGT-GGAGTAGGCTCTAGGATGGGAGAG-  43
      ||||||||  |||||||   |||| ||||||||||||||||| |||||| 
seq2  TCACACCCCTGGGAGAGAGCCCGTGGGAGTAGGCTCTAGGATTGGAGAGA  50

seq1  ---AGGTGGCAGTATGGTT-ACCCCCAGTG-TGCAG-CAGATG-TCCCGT  86
         |||| ||||||||||| |||||||||| ||||| |||||| ||||||
seq2  AGAAGGT-GCAGTATGGTTAACCCCCAGTGTTGCAGCCAGATGTTCCCGT  99

seq1  CCAGGAGGCCTGTACTCAATGGCATTTCCGGGGCTGCTGGGCA-CCAGGG  135
      |||||||| ||||||||||||||| |||||||||||||||||| ||||||
seq2  CCAGGAGG-CTGTACTCAATGGCAATTCCGGGGCTGCTGGGCACCCAGGG  148

seq1  -CGGGGGCTGGGGACTGG-CACCGATCATGGCTTTGCAGCCAAGTGCTCA  183
       ||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ACGGGGGCTGGGGACTGGCCACCGATCATGGCTTTGCAGCCAAGTGCTCA  198

seq1  CTAATCTACCCTGCACATC-TGCTTGAAAATAACTTAATTAGCCTGGAAG  232
      ||||||||||||||||||| ||||||||||||||| ||||||||||||||
seq2  CTAATCTACCCTGCACATCTTGCTTGAAAATAACTAAATTAGCCTGGAAG  248

seq1  AGCAGCT-GGCAGCCTGCCAATGAGGGGCCCTGAAGGAGGGGACCCAGAG  281
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCTGGGCAGCCTGCCAATGAGGGGCCCTGAAGGAGGGGACCCAGAG  298

seq1  AGCCTCTGACAGGAGACCCCATACCACAGGTGAACCCTGACAGGAGGAGA  331
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AG-CTCTGACAGGAGACCCCATACCACAGGTGAACCCTGACAGGAGGAGA  347

seq1  GAAGGCCTTCACCTTCAGAGGAGTGTACCCATTGGCCACCATAGGGACTG  381
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCCTTCACCTTCAGAGGAGTGTACCCATTGGCCACCATAGGGACTG  397

seq1  ACCCAACCTGGATCTGCCATGTGGGGGCCGTCTAGCCCCACTGGACCTGT  431
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAACCTGGATCTGCCATGTGGGGGCCGTCTAGCCCCACTGGACCTGT  447

seq1  AAGGAAGCTGGGACTCCAGGGAGCCTGGATAAGCTATGCAGTCAGACAGG  481
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGCTGGGACTCCAGGGAGCCTGGATAAGCTATGCAGTCAGACAGG  497

seq1  GTGTGCCTAGGAATGTTCATGATGTCTTTCTTCACAGACTCAGTAGGCAA  531
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCCTAGGAATGTTCATGATGTCTTTCTTCACAGACTCAGTAGGCAA  547

seq1  GGTACCAGCTGGGGGTTAGAGACCTCAGTTCTCTAAAAGACAGATGGGAT  581
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACCAGCTGGGGGTTAGAGACCTCAGTTCTCTAAAAGACAGATGGGAT  597

seq1  CCACTTGACTTTCTGTTCTGCAGTGGGGAGGGACCTAGAAGAGAGATGCC  631
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTGACTTTCTGTTCTGCAGTGGGGAGGGACCTAGAAGAGAGATGCC  647

seq1  AGGCTGTGGGCAGGGGCCACAATACTGGAAGGGGGAAGTGTGTGTTTTAA  681
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGTGGGCAGGGGCCACAATACTGGAAGGGGGAAGTGTGTGTTTTAA  697

seq1  GGTCACTATTAAGAGGGGTATCGTGCCTGGGGTTTATCTGGTATTCCCCA  731
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCACTATTAAGAGGGGTATCGTGCCTGGGGTTTATCTGGTATTCCCCA  747

seq1  GGGAGCCTGGGTAGAGGTAGATAGGACGGAACCCAGCATGCCCCCAGTCT  781
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCCTGGGTAGAGGTAGATAGGACGGAACCCAGCATGCCCCCAGTCT  797

seq1  CCTAGAGACACCAAGTGCCCAGGCCTGAAGGCGAGACCCAGGGCTTGTGA  831
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGAGACACCAAGTGCCCAGGCCTGAAGGCGAGACCCAGGGCTTGTGA  847

seq1  CTTAGGGTTTGGGTGGGGCTTGGGTGGAGCAGTGTGCAGCCACTGCCTGC  881
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGGTTTGGGTGGGGCTTGGGTGGAGCAGTGTGCAGCCACTGCCTGC  897

seq1  CAGGCCTTTCCTGAGCCTTCCCTGTCAGCTGTTGAGCTGGGTGCTAGCCA  931
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCTTTCCTGAGCCTTCCCTGTCAGCTGTTGAGCTGGGTGCTAGCCA  947

seq1  GGCACCCTGGGGGAAGTTGGGTGTGTATGCTTATGTGTGTGTGCGTCACT  981
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACCCTGGGGGAAGTTGGGTGTGTATGCTTATGTGTGTGTGCGTCACT  997

seq1  CTGAGTGAGCGACATGGAACACCCAGTGTGTAGCAGCCCTGCCGGTGCCA  1031
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTGAGCGACATGGAACACCCAGTGTGTAGCAGCCCTGCCGGTGCCA  1047

seq1  GTCCAAGGCTGAACTCCCTGGCCTCTCTGGCAATTCTTCTCTCCCACCTT  1081
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAAGGCTGAACTCCCTGGCCTCTCTGGCAATTCTTCTCTCCCACCTT  1097

seq1  AGAGACCATATCCCACACCAGGTCCACCACATGCTACCTCCCGTTCACCT  1131
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACCATATCCCACACCAGGTCCACCACATGCTACCTCCCGTTCACCT  1147

seq1  TGCACCCACCCTGCACCTCCAGCCCATGCCCTGGCCAAACTCTGAATTC  1180
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACCCACCCTGCACCTCCAGCCCATGCCCTGGCCAAACTCTGAATTC  1196

seq1: chr4_119719077_119719942
seq2: B6Ng01-254C10.g_70_937

seq1  GAATTCCCATCATATAACAGAGGGGCAAAATTGAAGGTATCTTGAGTCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATCATATAACAGAGGGGCAAAATTGAAGGTATCTTGAGTCAC  50

seq1  ATGTGGCTTTGCAGGGAGCAAGTTGGAAATTTTTCATTGGCATCTGTCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGCTTTGCAGGGAGCAAGTTGGAAATTTTTCATTGGCATCTGTCAT  100

seq1  TGTTGCCAATGTGTCTCCTCCCCTCCCCCACCACACACACCCTCCTCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCCAATGTGTCTCCTCCCCTCCCCCACCACACACACCCTCCTCCCT  150

seq1  GGGTTAGATTTGTAGCTGCAGCCTCAGGGCTTTGCAGCCTGGAGAAGGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTAGATTTGTAGCTGCAGCCTCAGGGCTTTGCAGCCTGGAGAAGGCA  200

seq1  GTGTGACCCGACCATTTCTCCTCTCCGGTCTCCATTTCTCACTCCCAGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGACCCGACCATTTCTCCTCTCCGGTCTCCATTTCTCACTCCCAGTC  250

seq1  CTCCCAGGTAAAGACTAGATAAGCCGATGCAGAGTTCCTTAGCACTTGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAGGTAAAGACTAGATAAGCCGATGCAGAGTTCCTTAGCACTTGCC  300

seq1  CAGCTCAGTACCCAGACGTTCATGTCCTCGACTGAACTAGATGTGAGGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCAGTACCCAGACGTTCATGTCCTCGACTGAACTAGATGTGAGGTC  350

seq1  AGAATCAACGGTGGTGGGGTGCTCCTGAGACCACCTAGAACAGCGCTGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCAACGGTGGTGGGGTGCTCCTGAGACCACCTAGAACAGCGCTGCC  400

seq1  TGCGTGCTCAGCCTTACTACAGGGGACTCTGGTTCTCAGGAGCACTCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTGCTCAGCCTTACTACAGGGGACTCTGGTTCTCAGGAGCACTCAGG  450

seq1  AAGAGCCTGGGAGGAGGAACATTTTGCTGAGCGTTACCAACAAGCTTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCCTGGGAGGAGGAACATTTTGCTGAGCGTTACCAACAAGCTTCTC  500

seq1  AAGACTGGAAGAAAAAGAGGGTGGGCACAGGGTAGAGGTAGAGCTGGCGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTGGAAGAAAAAGAGGGTGGGCACAGGGTAGAGGTAGAGCTGGCGG  550

seq1  CCCACGGGGAGAACAGTCCCCTGGCTGTGGCTCTTCATGAGTGCCAGAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACGGGGAGAACAGTCCCCTGGCTGTGGCTCTTCATGAGTGCCAGAGG  600

seq1  CTGGCCCAGGTCCATCCCCAGACCTTAGAATTGGGTACAAGATCAGAACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCCAGGTCCATCCCCAGACCTTAGAATTGGGTACAAGATCAGAACT  650

seq1  GTATCCCAGTAGCTGGCAGCAAGAAGGTAGAGAAGAAACAGTTGGAAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCCCAGTAGCTGGCAGCAAGAAGGTAGAGAAGAAACAGTTGGAAGCT  700

seq1  GGTAGAGGTGCAGCTAGGGAGGAGGCTCCGCCCTGCAGCCTGATCCTCGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGAGGTGCAGCTAGGGAGGAGGCTCCGCCCTGCAGCCTGATCCTCGG  750

seq1  GTACCAATCACTGCCCTTGCATCGTCTCCCTGGAGCCAGGCTGCAGAGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCAATCACTGCCCTTGCATCGTCTCCCTGGAGCCAGGCTGCAGAGGA  800

seq1  CTG-TTTCCCAAGTCTGGGAGAGGGCCTCCGGTGGGGCCTTCCCCCATGG  849
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTCCCAAGTCTGGGAGAGGGCCTCCGGTGGGGCCTTCCCCCATGG  850

seq1  GGTGG-AGGGAGGAGTGA  866
      ||||| ||||||||||||
seq2  GGTGGTAGGGAGGAGTGA  868