MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-254M19
Chromosome	1 (Build37)	4 (Build37)
Map Location	12,295,137 - 12,296,360	10,663,386 - 10,663,919
singlet/doublet	singlet	singlet
Overlap gene	none
Upstream gene	A830018L16Rik, LOC665262
Downstream gene	LOC100039709, LOC621353, LOC100039733, Sulf1, Slco5a1, LOC383490, Prdm14, Ncoa2
Link	Open Mouse BAC browser

Click to get alignment info.

name	A830018L16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320492 MGI:2444149
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665262 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665262
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 13 Proteins pseudo : _no_value

name	LOC100039709 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039709
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 21 Proteins pseudo : _no_value

name	LOC621353 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:621353
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	LOC100039733 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039733
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Sulf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240725 MGI:2138563
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slco5a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240726 MGI:2443431
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC383490 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383490
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins pseudo : _no_value

name	Prdm14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:383491 MGI:3588194
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ncoa2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17978 MGI:1276533
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	A830018L16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802484 GeneID:320492 MGI:2444149
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A830018L16 gene transcript_id : NM_177173.4

name	LOC100039733 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149233607 GeneID:100039733
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to DNA-directed RNA polymerase II largest subunit transcript_id : XM_001473399.1

name	Sulf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:26986616 GeneID:240725 MGI:2138563
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sulfatase 1 transcript_id : NM_172294.1

name	Slco5a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124378010 GeneID:240726 MGI:2443431
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier organic anion transporter family, member 5A1 transcript_id : NM_172841.2

name	Prdm14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487082 GeneID:383491 MGI:3588194
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PR domain containing 14 transcript_id : NM_001081209.1

name	Ncoa2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118026943 GeneID:17978 MGI:1276533
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear receptor coactivator 2 transcript_id : NM_001077695.1

name	Ncoa2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118026939 GeneID:17978 MGI:1276533
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear receptor coactivator 2 transcript_id : NM_008678.2

name	A830018L16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31559861 GeneID:320492 MGI:2444149
definition	codon_start : 1 product : hypothetical protein LOC320492 protein_id : NP_796147.2

name	LOC100039733 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149233608 GeneID:100039733
definition	codon_start : 1 product : similar to DNA-directed RNA polymerase II largest subunit protein_id : XP_001473449.1

name	Sulf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:26986617 CCDS:CCDS14820.1 GeneID:240725 MGI:2138563
definition	GO_component : GO:0009986 - cell surface [Evidence ISS]; GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0005615 - extracellular space [Evidence ISS] GO_function : GO:0004065 - arylsulfatase activity [Evidence ISS]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008449 - N-acetylglucosamine-6-sulfatase activity [Evidence ISS]; GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0030201 - heparan sulfate proteoglycan metabolism [Evidence ISS]; GO:0008152 - metabolism [Evidence IEA]; GO:0006790 - sulfur metabolism [Evidence ISS] codon_start : 1 note : extracellular sulfatase SULF-1 product : sulfatase 1 protein_id : NP_758498.1

name	Slco5a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124378011 CCDS:CCDS14821.1 GeneID:240726 MGI:2443431
definition	codon_start : 1 product : solute carrier organic anion transporter family, member 5A1 protein_id : NP_766429.2

name	Prdm14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487083 GeneID:383491 MGI:3588194
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] codon_start : 1 product : PR domain containing 14 protein_id : NP_001074678.1

name	Ncoa2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:118026944 GeneID:17978 MGI:1276533
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0030374 - ligand-dependent nuclear receptor transcription coactivator activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0005102 - receptor binding [Evidence IDA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0030375 - thyroid hormone receptor coactivator activity [Evidence IDA]; GO:0003713 - transcription coactivator activity [Evidence IGI] [Evidence IDA]; GO:0030528 - transcription regulator activity [Evidence IEA]; GO:0016564 - transcriptional repressor activity [Evidence IDA] GO_process : GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IGI]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2; glucocorticoid receptor interacting protein 1; transcriptional intermediary factor 2; TIF2/GRIP-1; glucocorticoid receptor-interacting protein 1 product : nuclear receptor coactivator 2 isoform b protein_id : NP_001071163.1

name	Ncoa2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:118026940 GeneID:17978 MGI:1276533
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0030374 - ligand-dependent nuclear receptor transcription coactivator activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0005102 - receptor binding [Evidence IDA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0030375 - thyroid hormone receptor coactivator activity [Evidence IDA]; GO:0003713 - transcription coactivator activity [Evidence IGI] [Evidence IDA]; GO:0030528 - transcription regulator activity [Evidence IEA]; GO:0016564 - transcriptional repressor activity [Evidence IDA] GO_process : GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IGI]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1; glucocorticoid receptor interacting protein 1; transcriptional intermediary factor 2; TIF2/GRIP-1; glucocorticoid receptor-interacting protein 1 product : nuclear receptor coactivator 2 isoform a protein_id : NP_032704.2

name	LOC621353 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:621353
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:207121
definition	standard_name : MHAa59h1.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:128797
definition	standard_name : D1Mit429

name	(CDS detail)
type	STS
link
xref	UniSTS:128436
definition	standard_name : D1Mit1

name	(CDS detail)
type	STS
link
xref	UniSTS:234069
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:128647
definition	standard_name : D1Mit294

name	(CDS detail)
type	STS
link
xref	UniSTS:128499
definition	standard_name : D1Mit160.1

name	(CDS detail)
type	STS
link
xref	UniSTS:128498
definition	standard_name : D1Mit160

name	(CDS detail)
type	STS
link
xref	UniSTS:178281
definition	standard_name : G67072

name	(CDS detail)
type	STS
link
xref	UniSTS:123627
definition	standard_name : 24.MHAa89f12.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:128625
definition	standard_name : D1Mit275

name	(CDS detail)
type	STS
link
xref	UniSTS:116247
definition	standard_name : D1Mit64

name	(CDS detail)
type	STS
link
xref	UniSTS:178358
definition	standard_name : AW121680

name	(CDS detail)
type	STS
link
xref	UniSTS:234071
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:165065
definition	standard_name : AI467640

name	(CDS detail)
type	STS
link
xref	UniSTS:161393
definition	standard_name : RH124571

name	(CDS detail)
type	STS
link
xref	UniSTS:162969
definition	standard_name : RH126261

name	(CDS detail)
type	STS
link
xref	UniSTS:234072
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:207126
definition	standard_name : C86124

name	(CDS detail)
type	STS
link
xref	UniSTS:167273
definition	standard_name : RH127265

name	(CDS detail)
type	STS
link
xref	UniSTS:158775
definition	standard_name : AF000582

name	(CDS detail)
type	STS
link
xref	UniSTS:271621
definition	standard_name : PMC170950P3

name	(CDS detail)
type	STS
link
xref	UniSTS:270698
definition	standard_name : PMC133972P1

name	(CDS detail)
type	STS
link
xref	UniSTS:128926
definition	standard_name : D1Mit67

name	LOC665262 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149233603 GeneID:665262
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 13 Proteins product : similar to adenine nucleotide translocase pseudo : _no_value transcript_id : XR_031159.1

name	LOC100039709 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149233606 GeneID:100039709
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 21 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) pseudo : _no_value transcript_id : XR_031176.1

name	LOC383490 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149233609 GeneID:383490
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins product : similar to developmental pluripotency associated 5 pseudo : _no_value transcript_id : XR_031240.1

clone name	MSMg01-504C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413O07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-179C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220J02
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-254M19.b	B6Ng01-254M19.g
ACC	GA061172	GA061173
length	1,226	897
definition	B6Ng01-254M19.b	B6Ng01-254M19.g
singlet/doublet	singlet	singlet
BLAST hit	unique	unique
Map location.	(12,295,137 - 12,296,360)	(10,663,386 - 10,663,919)
sequence	gaattccacataaaaacagagacactgaaacttatagaggagaaagtggg agaaagcttcgaagatatgggcacagggagaatctttctgaacagaacag caatggcttgtgctgtaagatcgataatctacaaatgggacctcataaaa ttgcaaagcttctgtaaggcagtgtcttcactgtcaataagacaaaaagg ccaccaaaagattgggaaaggatctttaccaatcctaaatcagatagggg actaatatccaatatatataaagaactcaagaagctagacttcagaaaaa tcaaataaccctattaaaaaatgaggtacagagctaaacaaagaattctt ccttttcactactagtctgggaattttattaacaggaaagtacatttatt agagaaaagagatggtaaatctcctttgtcagcagaaacagtatgcttta cttaagcgttaaaacaacttttgtacttagagttattgcaagaggcttgc taacccccagaatgtttttagtcgctttgccaattggatggattattgtc tgctcctttcttccctattcatatgaaggatctgctgcctaacacttctg gacatgagtggactttttgaagctctttattcatctattcctctcataag atttattcttttatctgttgttattgggtctgactttcttacccctttgt atttaggtattaagtgtctttgcagttctagcttgattttgcatgtttga cttgatttgccaaaattcctgtgtttttgttcagtatagctatcttattt ggtatttgcctattgtcagggcttcatatgtaattctatgtatttctgac tttgttattttctcgtggttgcctttgtaaatgaaatggcattgttcttt tataatgccatgctgctatacatggagggatgccaacagataacttttta ccccacatagggtaacaacaatagtccaggatacaattctacccaactct acttggtaaatcagtggagtttattagaattacttacaggataaagagtt acttacagggataggaagtacagtggatatgaatgggctccaaggtattg aatgggtgcgctcatgtagaatgcttacaacacacataaattcaatcctt taccgctacccaccactatttttctaacgttccgtcctatcagaaaggtt cacgaggccattaccatttacataaa	gaattctttgtttagttctgagccccgtttttgaatggagttatttgatt ttctggagtccatcttcttgagttctttatatatatatattggatattag tcccatatctgatttaagaaggtaaagatcctttcccaatctgttggtgg ctaccccagcttgtttcttcagaccatttgattggaaaattgttttccag cctttcattctgaggtagtgtctgtcttttctcctgagatgggtttcctg taagcagcaaaatgttgggtcctgtttgtgtagccagtctgttagtctat gtctttttattggggaattgagtccattgatattaagagatattaaggaa aagtaattgttgtttcctattatttttgttgttagagttggcattctgtt cttttggctgtcttcttttaggtttgttgagggattactttcttgctttt tctagggcgtggtttccatccttgtattgtttttttttttttttttctgt tattatcctttgaagtgctggattcgtggaaagttaatgtgtgaatttgg ttttgtcctggaatactctggtttctccatctatggtaattgaaaagttt ggcttgggtatagtagcctgggctggcatttgtgttctcttagtgtctgt ctaacagctgtccaggctcttctggctttcatagtctctggtgaaaagtc tggtgtacttctgataggcctgcctttatatgttacttgaccccttttcc cttatttgcttttaatatttctatctttatttagtgcatttgttgtctga ttattatggtgtcggggaggaatttcctttcttggtcctgtcttatttgg agttttgtaaggcttcttgtatgttcatggggcatctctttctttat
quality values	Open. Hide. 52 29 21 28 62 62 41 18 52 39 62 56 62 62 62 56 47 37 62 62 62 41 62 35 54 62 62 47 62 62 62 56 51 38 45 27 29 34 38 38 43 46 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 59 62 59 59 59 54 54 54 54 56 54 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 47 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 54 58 54 58 58 47 58 54 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 54 54 54 54 58 54 58 58 58 58 58 58 52 52 54 58 58 52 58 58 58 54 52 58 58 58 58 58 58 58 58 54 58 58 52 54 58 38 43 58 58 52 52 58 58 51 58 58 54 58 58 51 51 49 51 49 41 47 53 50 45 25 58 47 53 41 54 58 52 58 58 54 52 53 53 51 58 50 54 58 51 51 40 58 51 58 58 58 50 54 51 58 41 51 58 58 50 48 42 58 49 58 58 58 58 50 54 50 53 40 35 48 58 51 52 39 39 40 46 29 29 42 51 43 52 58 53 58 51 58 54 49 46 41 52 36 26 41 41 39 52 53 58 37 44 50 50 58 49 38 50 50 35 42 58 31 58 50 41 40 33 52 54 49 45 41 54 49 31 40 47 41 54 54 27 47 39 52 54 52 54 42 47 45 54 54 54 52 49 37 40 41 31 38 53 40 45 46 33 42 53 33 39 51 31 47 39 32 54 51 42 54 26 38 33 54 52 40 39 35 36 39 52 37 51 32 29 18 6 54 51 40 53 24 35 31 35 31 32 45 36 40 46 36 41 34 29 37 31 53 32 32 51 49 34 40 32 31 41 25 33 47 39 31 31 31 43 39 51 51 30 31 31 42 31 34 51 38 31 31 28 31 38 45 51 29 46 28 34 51 32 31 16 18 51 42 23 41 36 31 31 18 27 26 17 29 38 25 46 46 19 24 31 37 30 31 32 11 42 31 24 30 31 38 32 31 31 22 31 29 30 23 31 31 39 31 33 48 31 15 13 36 29 29 21 25 29 21 20 38 18 25 20 26 42 48 47 48 37 24 24 32 28 25 14 21 21 17 14 24 44 19 18 26 18 30 20 19 25 11 16 24 31 29 37 30 24 14 33 18 42 14 41 11 15 14 16 31 15 12 21 24 17 20 12 21 27 34 32 23 43 9 7 19 13 19 9 17 33 24 17 32 22 27 13 19 9 23 19 17 40 32 18 16 33 29 8 20 30 9 28 15 32 10 18 9 6 5 21 11 28 17 25 28 21 8 18 11 11 21 16 8 7 17 13 24 10 11 28 13 16 11 8 20 5 11 6 4 7 3 3 8 13 5 5 9 8 20 13 11 8 20 17 7 18 22 6 9 6 4 11 11 24 11 10 10 11 7 16 18 9 5 7 21 26 18 6 3 3 1 4 4 13 4 4 6 1 3 4 24 6 7 9 12 5 9 5 4 3 4 4 7 6 4 20 9 8 9 23 17 5 16 10 5 7 17 21 22 5 9 14 4 19 15 8 15 18 5 7 12 4 4 15 16 5 8 5 6 5 8 29 18 10 9 4 5 4 3 1 2 3 1 1 2 2 2 10 7 4 6 4 10 10 5 17 11 5 12 5 8 13 5 16 4 7 20 9 3 3 4 16 4 4 16 22 4 5 22 7 18 5 4 10 6 18 24	Open. Hide. 62 59 51 59 59 56 56 56 59 56 34 34 28 14 18 27 28 27 23 23 62 56 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 62 62 59 59 43 54 59 59 36 62 62 62 59 62 62 62 49 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 59 62 62 62 59 59 62 62 59 59 59 49 54 59 62 62 59 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 46 62 62 59 59 62 59 59 59 54 56 59 62 49 59 48 38 48 59 59 56 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 56 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 59 62 59 59 62 59 59 62 62 62 62 62 62 59 59 56 59 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 42 62 62 62 59 62 62 59 62 59 59 62 62 59 59 59 62 62 62 62 62 62 62 56 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 59 59 62 62 62 62 59 59 62 62 46 62 59 62 59 62 62 62 62 62 62 62 62 56 59 51 46 59 62 62 62 62 59 59 56 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 56 62 62 56 56 51 56 56 56 56 62 62 62 56 62 62 56 62 47 62 56 42 51 56 62 54 56 62 21 21 10 9 13 20 56 22 39 56 50 56 51 38 31 37 39 42 33 51 62 56 47 56 47 43 37 32 41 56 43 56 39 56 38 43 56 46 47 42 43 56 56 56 56 56 46 56 46 62 62 39 43 29 52 38 38 35 38 43 39 42 47 41 33 62 52 52 34 52 49 35 39 52 42 54 47 62 62 42 47 54 43 52 28 50 52 52 33 34 58 58 50 54 42 26 9 13 31 52 30 42 36 42 52 47 42 52 20 46 46 46 41 52 52 37 52 40 31 33 52 35 58 41 53 52 52 27 22 27 10 25 19 47 52 11 15 39 35 25 33 46 50 50 50 39 36 35 42 35 47 52 39 31 46 34 28 25 25 40 50 46 26 40 35 35 46 37 21 52 39 29 28 25 19 25 11 27 33 36 32 30 32 50 40 43 51 51 50 46 35 40 27 46 50 54 20 53 33 17 26 25 30 27 24 37 49 14 42 21 50 36 41 25 39 26 20 11 50 41 28 39 25 17 40 32 31 31 22 19 30 28 19 18 34 58 18 22 51 58 24 54 58 14 16 25 9 5 15 7 19 19 25 53 53 22 18 49 16 52 29 51 14 39 19 39 35 45 33 35 27 28 40 31 32 24 15 6 19 30 26 39 25 29 29 7 14 19 18 10 16 18 41 11 53 18 13 44 17 23 11 34 15 29 32 34 31 32 47 16 27 13 45 30 14 20 52 46 16 20 52 42 45 18 9 11 46 32 13 25 24 8 18 23 22 13 6 9 28 23 30 32 16 35 15 7 31 32 34 32 11 17 16 8 18 21 31 37 20 12 15 18 5 9 26 28 29 29 16 25 9 14 40 30 11 19 21 26 17 20 43 34 45 31 29 21 21 7 8 7

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_12295137_12296360
seq2: B6Ng01-254M19.b_47_1272

seq1  GAATTCCACATAAAAACAGAGACACTGAAACTTATAGAGGAGAAAGTGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACATAAAAACAGAGACACTGAAACTTATAGAGGAGAAAGTGGG  50

seq1  AGAAAGCTTCGAAGATATGGGCACAGGGAGAATCTTTCTGAACAGAACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGCTTCGAAGATATGGGCACAGGGAGAATCTTTCTGAACAGAACAG  100

seq1  CAATGGCTTGTGCTGTAAGATCGATAATCTACAAATGGGACCTCATAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGCTTGTGCTGTAAGATCGATAATCTACAAATGGGACCTCATAAAA  150

seq1  TTGCAAAGCTTCTGTAAGGCAGTGTCTTCACTGTCAATAAGACAAAAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAAAGCTTCTGTAAGGCAGTGTCTTCACTGTCAATAAGACAAAAAGG  200

seq1  CCACCAAAAGATTGGGAAAGGATCTTTACCAATCCTAAATCAGATAGGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCAAAAGATTGGGAAAGGATCTTTACCAATCCTAAATCAGATAGGGG  250

seq1  ACTAATATCCAATATATATAAAGAACTCAAGAAGCTAGACTTCAGAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATATCCAATATATATAAAGAACTCAAGAAGCTAGACTTCAGAAAAA  300

seq1  TCAAATAACCCTATTAAAAAATGAGGTACAGAGCTAAACAAAGAATTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATAACCCTATTAAAAAATGAGGTACAGAGCTAAACAAAGAATTCTT  350

seq1  CCTTTTCACTACTAGTCTGGGAATTTTATTAACAGGAAAGTACATTTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTCACTACTAGTCTGGGAATTTTATTAACAGGAAAGTACATTTATT  400

seq1  AGAGAAAAGAGATGGTAAATCTCCTTTGTCAGCAGAAACAGTATGCTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAAGAGATGGTAAATCTCCTTTGTCAGCAGAAACAGTATGCTTTA  450

seq1  CTTAAGCGTTAAAACAACTTTTGTACTTAGAGTTATTGCAAGAGGCTTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGCGTTAAAACAACTTTTGTACTTAGAGTTATTGCAAGAGGCTTGC  500

seq1  TAACCCCCAGAATGTTTTTAGTCGCTTTGCCAATTGGATGGATTATTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCCCCAGAATGTTTTTAGTCGCTTTGCCAATTGGATGGATTATTGTC  550

seq1  TGCTCCTTTCTTCCCTATTCATATGAAGGATCTGCTGCCTAACACTTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCTTTCTTCCCTATTCATATGAAGGATCTGCTGCCTAACACTTCTG  600

seq1  GACATGAGTGGACTTTTTGAAGCTCTTTATTCATCTATTCCTCTCATAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGAGTGGACTTTTTGAAGCTCTTTATTCATCTATTCCTCTCATAAG  650

seq1  ATTTATTCTTTTATCTGTTGTTATTGGGTCTGACTTTCTTACCCCTTTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTCTTTTATCTGTTGTTATTGGGTCTGACTTTCTTACCCCTTTGT  700

seq1  ATTTAGGTATTAAGTGTCTTTGCAGTTCTAGCTTGATTTTGCATGTTTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGGTATTAAGTGTCTTTGCAGTTCTAGCTTGATTTTGCATGTTTGA  750

seq1  CTTGATTTGCCAAAATTCCTGTGTTTTTGTTCAGTATAGCTATCTTATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATTTGCCAAAATTCCTGTGTTTTTGTTCAGTATAGCTATCTTATTT  800

seq1  GGTATTTGCCTATTGTCAGGGCTTCATATGTAATTCTATGTATTTCTGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTTGCCTATTGTCAGGGCTTCATATGTAATTCTATGTATTTCTGAC  850

seq1  TTTGTTATTTTCTCGTGGTTGCCTTTGTAAATGAAATGGCATTGTTCTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTATTTTCTCGTGGTTGCCTTTGTAAATGAAATGGCATTGTTCTTT  900

seq1  TATAATGCCATGCTGCTATACATGGAGGGATGCCAACAGATAACTTTTTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATGCCATGCTGCTATACATGGAGGGATGCCAACAGATAACTTTTTA  950

seq1  CCCCACATAGGGTAACAACAATAGTCCAGGATAACAATTCTACCCAACTC  1000
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CCCCACATAGGGTAACAACAATAGTCCAGGAT-ACAATTCTACCCAACTC  999

seq1  TAACTTGGTAAATCAGT-GAGTTTATTAGAATTACTTACAGGATAAAGAG  1049
      | ||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  T-ACTTGGTAAATCAGTGGAGTTTATTAGAATTACTTACAGGATAAAGAG  1048

seq1  TTACTTACA-GGATAGGAGTTACAGT-GATATGAAT-GGCTC--AAGTAT  1094
      ||||||||| ||||||||  |||||| ||||||||| |||||  | ||||
seq2  TTACTTACAGGGATAGGAAGTACAGTGGATATGAATGGGCTCCAAGGTAT  1098

seq1  TG-ATGGGTGGAGCCTCATGTAAGATGCTACAAACAC-CATAAAT--CAT  1140
      || |||||||    ||||||||  |||||   ||||| |||||||   ||
seq2  TGAATGGGTG--CGCTCATGTAGAATGCTTACAACACACATAAATTCAAT  1146

seq1  CCTTACCCGCTACCACACCACTA-TTTCCTACCTTATACAATCTCTACTA  1189
      ||||  |||||||| |||||||| ||| ||| |   | |  || |||  |
seq2  CCTTTACCGCTACC-CACCACTATTTTTCTAAC--GTTCCGTC-CTATCA  1192

seq1  GAGAATGTCAGCAGGCCCATTACCATTAACATAAA  1224
      || |   |||  ||| ||||||||||| |||||||
seq2  GAAAGGTTCACGAGG-CCATTACCATTTACATAAA  1226

seq1: chr4_10663386_10663919
seq2: B6Ng01-254M19.g_415_967 (reverse)

seq1  TAAAGAAAGAGATG-CCCATGAACATACAAGAAGCC-TACAGAACTCCAA  48
      |||||||||||||| ||||||||||||||||||||| |||| ||||||||
seq2  TAAAGAAAGAGATGCCCCATGAACATACAAGAAGCCTTACAAAACTCCAA  50

seq1  AT-AGACTGGACC-AGAAAAGAAATTCCT-CCCGACA-CATAATAATCAG  94
      || |||| ||||| ||||| ||||||||| ||||||| ||||||||||||
seq2  ATAAGACAGGACCAAGAAAGGAAATTCCTCCCCGACACCATAATAATCAG  100

seq1  AACACCAAATGCACTAAATAAAGATAG-AATACTAAAAGC-AGTAAGGGA  142
       ||| |||||||||||||||||||||| |||| ||||||| | |||||||
seq2  -ACAACAAATGCACTAAATAAAGATAGAAATATTAAAAGCAAATAAGGGA  149

seq1  AAA-AGGTCAAGTAACATATAAAGGCAAGCCTATCAGAATTACACCAGAT  191
      |||  |||||||||||||||||||||| ||||||||||| ||||||||| 
seq2  AAAGGGGTCAAGTAACATATAAAGGCAGGCCTATCAGAAGTACACCAGAC  199

seq1  TTTTCACCAGAGACTATGAAAGCCAGAAGAGCCTGGACAGATGTTATACA  241
      |||||||||||||||||||||||||||||||||||||||| ||||| |||
seq2  TTTTCACCAGAGACTATGAAAGCCAGAAGAGCCTGGACAGCTGTTAGACA  249

seq1  GACACTAAGAGAACACAAATGCCAGCCCAGGCTACTATACCC-AGCCAAA  290
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GACACTAAGAGAACACAAATGCCAGCCCAGGCTACTATACCCAAGCCAAA  299

seq1  C-TCTCAATTACCATAGATGGAGAAACCAAAGTATTCCACGACAAAACTA  339
      | | ||||||||||||||||||||||||| ||||||||| |||||||| |
seq2  CTTTTCAATTACCATAGATGGAGAAACCAGAGTATTCCAGGACAAAACCA  349

seq1  AATTCACCCATTATCTCTCCACGAATCCAGCCCTTCAAAGGATAATAACA  389
      ||||||| ||||| || |||||||||||||| ||||||||||||||||||
seq2  AATTCACACATTAACTTTCCACGAATCCAGCACTTCAAAGGATAATAACA  399

seq1  G---------AAAAAAACCAATACAAGGACGGGAACCACGCCCTAGAAAA  430
      |         ||||||| ||||||||||| || |||||||||||||||||
seq2  GAAAAAAAAAAAAAAAAACAATACAAGGATGGAAACCACGCCCTAGAAAA  449

seq1  AACAAGAAGATAATCCCTCAACAAACCTAAAAGAAGACAGCCACAAGAAC  480
      | ||||||  ||||||||||||||||||||||||||||||||| ||||||
seq2  AGCAAGAAAGTAATCCCTCAACAAACCTAAAAGAAGACAGCCAAAAGAAC  499

seq1  AGAATGCCAACTTTAACAACAAAAATAACAGGAAGCAACAATTACCTTTC  530
      |||||||||||| ||||||||||||||| ||||| |||||||||| ||||
seq2  AGAATGCCAACTCTAACAACAAAAATAATAGGAAACAACAATTACTTTTC  549

seq1  CTTA  534
      ||||
seq2  CTTA  553

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Alignment Information