BAC Information

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BAC

Clone NameB6Ng01-255D01
Chromosome4 (Build37)
Map Location 12,545,604 - 12,546,688
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039862, Gem, Cdh17, Ppm2c, Tmem67, C430048L16Rik, LOC230010, LOC623671, LOC100039958, Rbm12b, 6720467C03Rik, LOC545592
Downstream geneOTTMUSG00000004461, LOC100039988
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255D01.bB6Ng01-255D01.g
ACCGA061459GA061460
length1,0811,169
definitionB6Ng01-255D01.b B6Ng01-255D01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtttacttatatgttcaagatgtgtgtgtatatgtatccctca
gttcccttgatagttccccactcttccttaatttcttctcagtcaagttt
gctttttggaaactgacctttctctaccttctcagaccccattcactctc
tagttcctttgaactttctgactaactcatccattcccaagcaagctgaa
cattccatagtgtttcacatgtgagtcactgtcttgacttcactttgtat
gtccttgcctttccctgggccacccagcacaatgttcctggtattgagtc
atcccagaaatggaaaagttgttaaaataaccaaatgaaggccctccatg
tctttcctttatttagattctatgattctaatgaaaactattatcatatt
gatcagatgagaaatcagataagaaatccaagcagagctagtaatacttg
gaatgaaacggtcttctgtgctggctgaggcaaagattctctcaagccag
actccctcttcccctcttcctcatttatttggtcatatgcccttctctac
atcaaaactacttttggaaaaaaatctctttctgtaaatatgaaaacaaa
agtagaggtcttcaaaaggctggtatataccataacttatagctatatca
cttgaggctgagatcacctaaatcatgttgacagatctgtcttcagccag
acctatgtacattgataaattagatacataattatatacaatttacattt
tttctgctgaacatatgcacctggatattcagttcctaaaacacctctct
gtgtgctgttcatgttcctcctaggtgagcctcaagtatgggcaccacta
tctctgtttgcctatagcacaaccagcagcatctagctaactgaataact
gagtttctttctcaccctgacagttttctcaaattgctcaccatatttac
agagctgccttcaggtaatgaactgattgtgtttctctcacatacaccca
gcttgggacattgcctacatgactactaaccatgcttctcttgtggggtc
tgaggggtggtactcgacaggagccagagtt
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagatggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagagatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgcccggggcccagcaaa
cacagaagtggatgctcacagtcagctaatggatgggatcatagggctcc
caatggagagctagagaaagtagccaagagctaaagggatctgcaaccct
atagtgacacattattgagctacagtacccggagctctgactctagctgc
atatatatcaaagattgctagtcgtcatcactgaaagagagtccaatgaa
cttgccaactttatatgccctagtcagaattccaggctaagggtatgctg
accagggattagtcgcctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_12545604_12546688
seq2: B6Ng01-255D01.b_47_1127 (reverse)

seq1  AACTCTGGCTCCTGTCGAAGTTACCACCCCTTCAGACCCCACAAGAGAAG  50
      ||||||||||||||||||   ||||||||| |||||||||||||||||||
seq2  AACTCTGGCTCCTGTCGA--GTACCACCCC-TCAGACCCCACAAGAGAAG  47

seq1  CATGGTTAGTAGTCATGTAGGCAATGTCCCAAGCTGGGTTGTATGTGAGA  100
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CATGGTTAGTAGTCATGTAGGCAATGTCCCAAGCTGGG-TGTATGTGAGA  96

seq1  GAAACACAATCAGTTCATTACCTGAAGGCAGCTCTGTAAATATGGTGAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACACAATCAGTTCATTACCTGAAGGCAGCTCTGTAAATATGGTGAGC  146

seq1  AATTTGAGAAAACTGTCAGGGTGAGAAAGAAACTCAGTTATTCAGTTAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGAGAAAACTGTCAGGGTGAGAAAGAAACTCAGTTATTCAGTTAGC  196

seq1  TAGATGCTGCTGGTTGTGCTATAGGCAAACAGAGATAGTGGTGCCCATAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGCTGCTGGTTGTGCTATAGGCAAACAGAGATAGTGGTGCCCATAC  246

seq1  TTGAGGCTCACCTAGGAGGAACATGAACAGCACACAGAGAGGTGTTTTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGCTCACCTAGGAGGAACATGAACAGCACACAGAGAGGTGTTTTAG  296

seq1  GAACTGAATATCCAGGTGCATATGTTCAGCAGAAAAAATGTAAATTGTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGAATATCCAGGTGCATATGTTCAGCAGAAAAAATGTAAATTGTAT  346

seq1  ATAATTATGTATCTAATTTATCAATGTACATAGGTCTGGCTGAAGACAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTATGTATCTAATTTATCAATGTACATAGGTCTGGCTGAAGACAGA  396

seq1  TCTGTCAACATGATTTAGGTGATCTCAGCCTCAAGTGATATAGCTATAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCAACATGATTTAGGTGATCTCAGCCTCAAGTGATATAGCTATAAG  446

seq1  TTATGGTATATACCAGCCTTTTGAAGACCTCTACTTTTGTTTTCATATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGTATATACCAGCCTTTTGAAGACCTCTACTTTTGTTTTCATATTT  496

seq1  ACAGAAAGAGATTTTTTTCCAAAAGTAGTTTTGATGTAGAGAAGGGCATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAGAGATTTTTTTCCAAAAGTAGTTTTGATGTAGAGAAGGGCATA  546

seq1  TGACCAAATAAATGAGGAAGAGGGGAAGAGGGAGTCTGGCTTGAGAGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAAATAAATGAGGAAGAGGGGAAGAGGGAGTCTGGCTTGAGAGAAT  596

seq1  CTTTGCCTCAGCCAGCACAGAAGACCGTTTCATTCCAAGTATTACTAGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCCTCAGCCAGCACAGAAGACCGTTTCATTCCAAGTATTACTAGCT  646

seq1  CTGCTTGGATTTCTTATCTGATTTCTCATCTGATCAATATGATAATAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTGGATTTCTTATCTGATTTCTCATCTGATCAATATGATAATAGTT  696

seq1  TTCATTAGAATCATAGAATCTAAATAAAGGAAAGACATGGAGGGCCTTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTAGAATCATAGAATCTAAATAAAGGAAAGACATGGAGGGCCTTCA  746

seq1  TTTGGTTATTTTAACAACTTTTCCATTTCTGGGATGACTCAATACCAGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTATTTTAACAACTTTTCCATTTCTGGGATGACTCAATACCAGGA  796

seq1  ACATTGTGCTGGGTGGCCCAGGGAAAGGCAAGGACATACAAAGTGAAGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGTGCTGGGTGGCCCAGGGAAAGGCAAGGACATACAAAGTGAAGTC  846

seq1  AAGACAGTGACTCACATGTGAAACACTATGGAATGTTCAGCTTGCTTGGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGTGACTCACATGTGAAACACTATGGAATGTTCAGCTTGCTTGGG  896

seq1  AATGGATGAGTTAGTCAGAAAGTTCAAAGGAACTAGAGAGTGAATGGGGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGATGAGTTAGTCAGAAAGTTCAAAGGAACTAGAGAGTGAATGGGGT  946

seq1  CTGAGAAGGTAGAGAAAGGTCAGTTTCCAAAAAGCAAACTTGACTGAGAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAAGGTAGAGAAAGGTCAGTTTCCAAAAAGCAAACTTGACTGAGAA  996

seq1  GAAATTAAGGAAGAGTGGGGAACTATCAAGGGAACTGAGGGATACATATA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTAAGGAAGAGTGGGGAACTATCAAGGGAACTGAGGGATACATATA  1046

seq1  CACACACATCTTGAACATATAAGTAAACTGAATTC  1085
      |||||||||||||||||||||||||||||||||||
seq2  CACACACATCTTGAACATATAAGTAAACTGAATTC  1081