BAC Information

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BAC

Clone NameB6Ng01-255G13
Chromosome4 (Build37)
Map Location 90,299,266 - 90,300,305
singlet/doubletsinglet
Overlap genenone
Upstream geneDmrta1, Zfp352, LOC619842, LOC435792
Downstream genePpia-ps4_804.1, LOC664840, LOC664848, LOC100042274, Elavl2, LOC664864
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255G13.bB6Ng01-255G13.g
ACCGA061622GA061623
length1,167448
definitionB6Ng01-255G13.b B6Ng01-255G13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagcattcacattgggtgagggaatacgaggtatttgacctactt
attctgggttactttatgtatgatatttcctagttgcatattattgttaa
aaatttcttatagataaataagattccattgtgtttatctactgtatgtt
tgatatatatccataaggtgatgggtatctagtctgattccatgtctcag
ctgctgtgtctacaacaatgatgagcatggatatacaaatatttctgtaa
catcctttgtatatatatcaaatatgccaaatgttggatcataatgtatt
cgcatttttaagtgtgttttagaatccccatactggtttccctaatggct
gcacctatttatcctcttaccaggtgtgaataagagttcttctttttccc
tcatatatatggacatttgtgtcttcattttcctgatgatagcttcttta
aggtaagatgaaatctcaaagtagttcatttattttatgtatataagtac
actgcagttatcttcagacacaccagaagaaggtgtcagatcacattgca
gatggttgtgagccaacatgtggttgctggaaattgaactcaggaccctt
ttggaagagcagccctcaaagtagttttaattagtattttcctgatggca
atggatattgaatggtttaaaaatattcattgggataatcgacagttctc
tataattgaacttaagatctgctcaacaagaaagaaatcatgcataatac
tggaagactaatcaatcacccagtcaagtatgaatcttggaagaaaacct
ataaccaccaacttactaaatcaactttctaaatatcttttaaagaagag
ggtgtcagatctcactacaagtggttgtgatccaccagttggatgctggg
atttggactcagaccttcagaagagtagtcagtactcttacccgccgaac
catcttgccaaatttacccttagataaatatagtcttcacccctcatcaa
aacaaaccaacaaaacaaacaacaacaccaaaacatcttctttgtacatg
acggaaaacattcaaagaaatccacaccaatcaaacacaggttgtagagc
taatcataaagggataatttctacaatacactactgccaccttaaggctt
cagggatcattgaggaa

caaagctttagaacaacagtgatggaaattgcaattctggttctgaattg
gattggtttattttctttttttttgtcttgtctgagcatgactcatattt
actaagtctctcttttcttctttgtaaagaaggaaaaatgatatcctttc
aaggagctatactaaagattaaaagtacccaaggagctgaaggagtttgc
agccctatgggaggaacaacaatatgaagtagctactaccctcagagctc
cctgggactaaaccaccaatcaaagaaaatacatggtgtgactcactgct
ctagctgcatatatagcagagaatggcctagttggtcatcaatgggagga
gaggctcttggtcctgtgaaggttctatgccccagtataggggaatgcca
gagtcagaaagtgggagtgggttggttggtgagcagggggagtgggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_90299266_90300305
seq2: B6Ng01-255G13.b_176_1212

seq1  GTGTTTATCTACTGTATGTTTGATATATATCCATAAGGTGATGGGTATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTATCTACTGTATGTTTGATATATATCCATAAGGTGATGGGTATCT  50

seq1  AGTCTGATTCCATGTCTCAGCTGCTGTGTCTACAACAATGATGAGCATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGATTCCATGTCTCAGCTGCTGTGTCTACAACAATGATGAGCATGG  100

seq1  ATATACAAATATTTCTGTAACATCCTTTGTATATATATCAAATATGCCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACAAATATTTCTGTAACATCCTTTGTATATATATCAAATATGCCAA  150

seq1  ATGTTGGATCATAATGTATTCGCATTTTTAAGTGTGTTTTAGAATCCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGGATCATAATGTATTCGCATTTTTAAGTGTGTTTTAGAATCCCCA  200

seq1  TACTGGTTTCCCTAATGGCTGCACCTATTTATCCTCTTACCAGGTGTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGTTTCCCTAATGGCTGCACCTATTTATCCTCTTACCAGGTGTGAA  250

seq1  TAAGAGTTCTTCTTTTTCCCTCATATATATGGACATTTGTGTCTTCATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGTTCTTCTTTTTCCCTCATATATATGGACATTTGTGTCTTCATTT  300

seq1  TCCTGATGATAGCTTCTTTAAGGTAAGATGAAATCTCAAAGTAGTTCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGATGATAGCTTCTTTAAGGTAAGATGAAATCTCAAAGTAGTTCATT  350

seq1  TATTTTATGTATATAAGTACACTGCAGTTATCTTCAGACACACCAGAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTATGTATATAAGTACACTGCAGTTATCTTCAGACACACCAGAAGA  400

seq1  AGGTGTCAGATCACATTGCAGATGGTTGTGAGCCAACATGTGGTTGCTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTCAGATCACATTGCAGATGGTTGTGAGCCAACATGTGGTTGCTGG  450

seq1  AAATTGAACTCAGGACCCTTTTGGAAGAGCAGCCCTCAAAGTAGTTTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGAACTCAGGACCCTTTTGGAAGAGCAGCCCTCAAAGTAGTTTTAA  500

seq1  TTAGTATTTTCCTGATGGCAATGGATATTGAATGGTTTAAAAATATTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTATTTTCCTGATGGCAATGGATATTGAATGGTTTAAAAATATTCAT  550

seq1  TGGGATAATCGACAGTTCTCTATAATTGAACTTAAGATCTGCTCAACAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATAATCGACAGTTCTCTATAATTGAACTTAAGATCTGCTCAACAAG  600

seq1  AAAGAAATCATGCATAATACTGGAAGACTAATCAATCACCCAGTCAAGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAATCATGCATAATACTGGAAGACTAATCAATCACCCAGTCAAGTA  650

seq1  TGAATCTTGGAAGAAAACCTATAACCACCAACTTACTAAATCAACTTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCTTGGAAGAAAACCTATAACCACCAACTTACTAAATCAACTTTCT  700

seq1  AAATATCTTTTAAAGAAGAGGGTGTCAGATCTCACTACAAGTGGTTGTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCTTTTAAAGAAGAGGGTGTCAGATCTCACTACAAGTGGTTGTGA  750

seq1  TCCACCAGTTGGATGCTGGGATTTGGACTCAGGACCTTCAGAAGAGTAGT  800
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TCCACCAGTTGGATGCTGGGATTTGGACTCA-GACCTTCAGAAGAGTAGT  799

seq1  CAGTACTCTTACCCGCCGAACCATCTTGCCAAATTTACCCTTAGATAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACTCTTACCCGCCGAACCATCTTGCCAAATTTACCCTTAGATAAAT  849

seq1  ATAGTCTTCACCCCTCATCAAAAACAAACAAACAAAAACAAAACAACAAC  900
      ||||||||||||||||||| ||||||||| |||||||   ||||||||||
seq2  ATAGTCTTCACCCCTCATC-AAAACAAACCAACAAAA--CAAACAACAAC  896

seq1  AACAAAAACATC-TCTTTGTACATGACGGAGACAATCAAAAGAAAATCAC  949
       || |||||||| ||||||||||||||||| |  ||  |||||||  |||
seq2  -ACCAAAACATCTTCTTTGTACATGACGGAAAACATTCAAAGAAATCCAC  945

seq1  AACCAATCAAAACACAGGGTTGTAGAGCTAATCATAAA-GGATAA-ATCT  997
       ||||||| ||||||| ||||||||||||||||||||| ||||||  |||
seq2  -ACCAATC-AAACACA-GGTTGTAGAGCTAATCATAAAGGGATAATTTCT  992

seq1  ACAATACAACTACTGCAAC--TTAGGC-TCAGGGATCATTGAGGAA  1040
      ||||||| |||||||| ||  | |||| ||||||||||||||||||
seq2  ACAATAC-ACTACTGCCACCTTAAGGCTTCAGGGATCATTGAGGAA  1037


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