BAC Information

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BAC

Clone NameB6Ng01-255K05
Chromosome4 (Build37)
Map Location 61,404,951 - 61,405,672
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100038948, LOC620997, Mup1, LOC620942, LOC100039008, LOC100039028, LOC620982, LOC100039054, LOC100039063, LOC667234, LOC100039089, LOC667239, LOC100039116, LOC667242, LOC100039150, LOC100039019, LOC100039177, LOC621093, LOC100039206, LOC621127, LOC100039228, LOC384021
Downstream geneLOC100039247, LOC667278, Mup5, LOC435785, LOC667295, LOC100039305, LOC546832, OTTMUSG00000007485, Mup3, LOC100039345, OTTMUSG00000000231, Zfp37, Slc31a2, Fkbp15, Slc31a1, Cdc26, Prpf4, Rnf183, Wdr31, Bspry, Hdhd3, Alad, Pole3, 4933430I17Rik, Rgs3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255K05.bB6Ng01-255K05.g
ACCGA061798GA061799
length1,1311,208
definitionB6Ng01-255K05.b B6Ng01-255K05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgcttatctctgaaccacatttttatttattttttattatta
ttattgaatttaaaattttttattatgtattttcctcaattacatttcca
atgctatcccaaaagtcccccataccctccccccccccacacacacaccc
ctacgcacccattcccacttttttgtcctggcgttcccctgtactgggga
atacaaagtttgcatgtccaatgggcctttctttccagtgatggccgact
aggtcatcttttgatacatatgcagctagagtcaagagccctggggtact
ggttagttcataatgttgttgcacctacagggttgcagatctctttagct
ccttgggtactttctctagctcctccattgggggctctgtgatccatcca
atatctgactgtgagtatccacttatgtgtttgctaggcccaggcatagt
ctcacaagagacagctatatcagggtcctttcagcaaacccttgttagtg
tatgcaatggttgtggagagccgcaataacatttaccatcataagatggt
gccagcttccgcagtgccttatgccacctaaacaaagatcaagctatgtg
cgcatgtgcaaggagtgaaagcacaccaagttacaagcccacccccgggg
catatgagatcgtgggtaaagcaaccattcaggcatggacatgccacacc
agggggtatttaagcagcgcctttctgaggcttcttctttgtcttcctca
tcaatatgtaataaagtttggctgcagaaggattcttctgtcccgtgtgc
gttcttgctagcgagaacaatagctcgggacataatggcgctggaacccg
ggaacgcctcaccatcgctgggcgccaagggggccccccactcgtgggga
aggatccagactgcaggacttgaagtaagtaagctctgggagacgtgtgc
accatgtcagaaacagagcgggtaaagattagagttcagagaaaataatt
aagaatacgtccttccaagaccttggatccgaggactgagagaattgggc
aaggatgcctgagagaggataggtaagaaggaaagcccgaaaagacaaga
ttgactgacaaaaagtcagctcactggcgcg
gaattcttttctttatttcttccttgactcaaggatcattgagtagagaa
ctgttcattttccatgagtttgtggcctttaggttgtttctattgttgaa
ctctagatttaatgcatgatagtatgagaggatactaggagttatttcaa
tgttcttctatctgttgagataacaagaccagctgctttgtgaccaacta
tgtggtcagttttagaaaagattcgatgagatgctaagaagaaggtatat
tcttttgtgtttgggtgagatgttctctagatatgtgttaggtatattta
attcataactttcgttagtttcaaattttctttgcttactttctatctca
atgacctatctattggtgagagtggggagatgaagacctctacctgtttt
attgtattttcctgtatttctttaaggaatttattcatttcttctttaaa
gacctctatcatctttacaagattgaatttaatgtcattttcttgttctt
taattgtgttaggataatcagggttgctgtactgagatagctatgctctc
aagatggcatatttcaatggctcttattggttatgttcttctactcacct
ggttgtccctggattttatagatgtaacaggtatcaggaaattgggccta
acctggatattcctggtgcagcaggcctcctatgggaagccttgagctgg
acaagtctcagaggagctggttgtgctccaggtgacatagaggcagggga
tttgggggcaggaagtaggttattacctgtatattccaggtacagcagtt
ctggtggaggccagggagaagtggctggacaatgaaactgtggtaggggg
tgggcagcacatagctcaaagcaactggatatgcacaaccttgtagtttg
ttaagaatgagtttgtacagattttatgttttctttctttgtcatatata
tcagacaataaaagaatatcagtggttgtcatatttaaatttgagatatc
aaagaatgtccttgaggtgacattataaatttatatgcattcatgctgtt
tggaggatatttaattcatgttgtggccacaataatactcctgctataat
atcaacttgaatttggaaatgtcatggcatatgatatcacgctaatagaa
ctggcatttctctaattgaaaatagctacacagcgagtatgttgagattc
gcgtctag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_61404951_61405672
seq2: B6Ng01-255K05.b_469_1171

seq1  GTTTGCTAGGCCCAGGCATAGTCTCACAAGAGACAGCTATATCAGGGTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCTAGGCCCAGGCATAGTCTCACAAGAGACAGCTATATCAGGGTCC  50

seq1  TTTCAGCAAACCCTTGTTAGTGTATGCAATGGTTGTGGAGAGCCGCAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGCAAACCCTTGTTAGTGTATGCAATGGTTGTGGAGAGCCGCAATA  100

seq1  ACATTTACCATCATAAGATGGTGCCAGCTTCCGCAGTGCCTTATGCCACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTACCATCATAAGATGGTGCCAGCTTCCGCAGTGCCTTATGCCACC  150

seq1  TAAACAAAGATCAAGCTATGTGCGCATGTGCAAGGAGTGAAAGCACACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAAAGATCAAGCTATGTGCGCATGTGCAAGGAGTGAAAGCACACCA  200

seq1  AGTTACAAGCCCACCCCCGGGGCATATGAGATCGTGGGTAAAGCAACCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACAAGCCCACCCCCGGGGCATATGAGATCGTGGGTAAAGCAACCAT  250

seq1  TCAGGCATGGACATGCCACACCAGGGGGTATTTAAGCAGCGCCTTTCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCATGGACATGCCACACCAGGGGGTATTTAAGCAGCGCCTTTCTGA  300

seq1  GGCTTCTTCTTTGTCTTCCTCATCAATATGTAATAAAGTTTGGCTGCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCTTCTTTGTCTTCCTCATCAATATGTAATAAAGTTTGGCTGCAGA  350

seq1  AGGATTCTTGTGTCCCGTGTGCGTTCTTGCTAGCGAGAACAATAGCTCGG  400
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTCTTCTGTCCCGTGTGCGTTCTTGCTAGCGAGAACAATAGCTCGG  400

seq1  GACATAATGGCGCTGGAACCCGGGAACGCCTCACCATCGCTGGGCGCCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATAATGGCGCTGGAACCCGGGAACGCCTCACCATCGCTGGGCGCCAA  450

seq1  GGGGGCCCCCCACTCGTGGGGAAGGATCCAGAACTGCAGGACTTGAAGGT  500
      ||||||||||||||||||||||||||||||| ||||||||||||||| ||
seq2  GGGGGCCCCCCACTCGTGGGGAAGGATCCAG-ACTGCAGGACTTGAA-GT  498

seq1  AAGTAAGCTCTGGGAGACGTGTGCACCATGTCAGAAACAGAGCGGGGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||   |
seq2  AAGTAAGCTCTGGGAGACGTGTGCACCATGTCAGAAACAGAGCGGG--TA  546

seq1  AAGATTAAGAGTTCAGAGAAAATAATTAAGAAATAAGGCCCTTCCAAAGA  600
      |||||| |||||||||||||||||||||||||   | | |||||| ||||
seq2  AAGATT-AGAGTTCAGAGAAAATAATTAAGAA--TACGTCCTTCC-AAGA  592

seq1  CCTTGGATCCGAGGAACTGAGAGAATTGGGGAAAGGATGCCCCTGAGAGA  650
      |||||||||||||| |||||||||||| ||| |||||||  |||||||||
seq2  CCTTGGATCCGAGG-ACTGAGAGAATT-GGGCAAGGATG--CCTGAGAGA  638

seq1  GGATAAGGAAAAGAAGGAGAAAGCCCGAAAAAAGACAAGAGTAGCTGGAC  700
      |||||  |  ||||||  |||||||||  ||||||||||| |  || |||
seq2  GGATA--GGTAAGAAG--GAAAGCCCG--AAAAGACAAGATTGACT-GAC  681

seq1  ACAAAAGTCAGCTCACT-GCGCG  722
      | ||||||||||||||| |||||
seq2  A-AAAAGTCAGCTCACTGGCGCG  703