BAC Information

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BAC

Clone NameB6Ng01-256G15
Chromosome4 (Build37)
Map Location 57,436,401 - 57,653,313
singlet/doubletdoublet
Overlap geneLOC619973, LOC667049, Palm2, LOC100041513
Upstream geneActl7b, Actl7a, Ikbkap, BC026590, Ctnnal1, D730040F13Rik, 6430704M03Rik, Epb4.1l4b, Ptpn3, LOC100041460, 1700042G15Rik, LOC100041342
Downstream geneAkap2, D630039A03Rik, Txn1, Txndc8, Svep1, Musk, Edg2, LOC675306
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-256G15.bB6Ng01-256G15.g
ACCGA062379GA062380
length6931,102
definitionB6Ng01-256G15.b B6Ng01-256G15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,652,621 - 57,653,313)(57,436,401 - 57,437,497)
sequence
gaattcaacctaagtgcattttcctcagctgagggggtgaccaccaacct
ggaacctgactgacggtaggaaagacgactcactcactactcagctgagt
caacagtcagctcctttaaagtgaaactcactcccttctggcgactgcag
taatctcattccccagtcaggcacccgcttccttctatggagaccagaca
gctacttaggaaggctggactcagaacaaagagacatggaaccacagctg
ctttaagtgggcacagtaaagcctcttcttatcaaaattcccagttcccc
agtgtttagaaatgggtactcccctgggtggtaccttacgcgcactgcca
tgtttggagctttgggtctttcctttttagttttcaaggctagccatccg
tgcttattctgtctactccatccctccccctgagagaggaaaagacaatc
aatgcattgtactctgtttactaaactaacatcaccttcagccctgccca
tccctgagttgcaaggttgccatggtgtaagtgttgtgtgtacctttgat
agccagtcttagatactgcccgatgctcaggttgacaagtctgttgtgtt
tcctgagcgtttcctcacataaaatgaagtcaaatttcccattgtttctt
taaactgaatggatggatggatggatggatggatggatggatg
gaattcagtcgagagacacaagtacttttagtaaagcaaagctctccaaa
gagcgatgagagtgggttgtcctgaagcagacactgcactgtggatttta
aagaagcatttaataaatatttatgagttaggtggcatattcacggataa
ggtgactctattcctccccgaacaatggtggattaagtctcccttttaga
gtattcctcccatagggaggggaataaaatctaattgatgacataatgaa
gtcggaatcttttgaggatgcagacccttcgttaggtgtggcagttggga
cagtgtcctggtgccttagtttctgatacagcaagagtaacctaactgca
acttcaaggttatttaaccacagtgggcatcttcagtcaggggacatagt
gactaagacagagctgcaggctttcttagttaattcttgcctagtgcgta
ttagaggaacacgagagactctcttctccatcgtattcttatcttgctgc
ctagcgggtatcagaagaacacgagagactctcttctccatcgtattgcc
actcgtgaggttacagatttcccttgggtttcttgaaatccccctttcgt
gcctccttgagttttctggttttgacctttgcttgttgttagatctggtg
tcctcgcctcaccccagtggagacttggcagccagaccctgctttgggta
ctgattagggtaggaggccactctcctcttcacaggcgaactgtagatat
gcatcagaggagcacaatgtcatctaggacttttattttttccttctatc
ttacagagccaaatcccaggattagtctagaaaggatggctgcatcttac
ttggatgggggtgtcttctgatctacacaatgtctgggccaatgtacatt
gatcaattcacattgatctgggctaatctgttgccttagactgcaatttt
taatgtaagtcaaatctttgcatgcatgtgtacatgtgtatgtaggtgta
tgtgcatgtgtgtgcatgcaaataaaggaccagagggttgacgaccagtg
tgttcccgatttgctttcatctttattttttgagaacaaggtttctcact
ga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_57652621_57653313
seq2: B6Ng01-256G15.b_45_737 (reverse)

seq1  CATCCATCCATCCATCCATCCATCCATCCATCCATTCAGTTTAAAGAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCATCCATCCATCCATCCATCCATCCATCCATTCAGTTTAAAGAAAC  50

seq1  AATGGGAAATTTGACTTCATTTTATGTGAGGAAACGCTCAGGAAACACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGAAATTTGACTTCATTTTATGTGAGGAAACGCTCAGGAAACACAA  100

seq1  CAGACTTGTCAACCTGAGCATCGGGCAGTATCTAAGACTGGCTATCAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTTGTCAACCTGAGCATCGGGCAGTATCTAAGACTGGCTATCAAAG  150

seq1  GTACACACAACACTTACACCATGGCAACCTTGCAACTCAGGGATGGGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACACACAACACTTACACCATGGCAACCTTGCAACTCAGGGATGGGCAG  200

seq1  GGCTGAAGGTGATGTTAGTTTAGTAAACAGAGTACAATGCATTGATTGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAAGGTGATGTTAGTTTAGTAAACAGAGTACAATGCATTGATTGTC  250

seq1  TTTTCCTCTCTCAGGGGGAGGGATGGAGTAGACAGAATAAGCACGGATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTCTCTCAGGGGGAGGGATGGAGTAGACAGAATAAGCACGGATGG  300

seq1  CTAGCCTTGAAAACTAAAAAGGAAAGACCCAAAGCTCCAAACATGGCAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCCTTGAAAACTAAAAAGGAAAGACCCAAAGCTCCAAACATGGCAGT  350

seq1  GCGCGTAAGGTACCACCCAGGGGAGTACCCATTTCTAAACACTGGGGAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCGTAAGGTACCACCCAGGGGAGTACCCATTTCTAAACACTGGGGAAC  400

seq1  TGGGAATTTTGATAAGAAGAGGCTTTACTGTGCCCACTTAAAGCAGCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAATTTTGATAAGAAGAGGCTTTACTGTGCCCACTTAAAGCAGCTGT  450

seq1  GGTTCCATGTCTCTTTGTTCTGAGTCCAGCCTTCCTAAGTAGCTGTCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCATGTCTCTTTGTTCTGAGTCCAGCCTTCCTAAGTAGCTGTCTGG  500

seq1  TCTCCATAGAAGGAAGCGGGTGCCTGACTGGGGAATGAGATTACTGCAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATAGAAGGAAGCGGGTGCCTGACTGGGGAATGAGATTACTGCAGT  550

seq1  CGCCAGAAGGGAGTGAGTTTCACTTTAAAGGAGCTGACTGTTGACTCAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCAGAAGGGAGTGAGTTTCACTTTAAAGGAGCTGACTGTTGACTCAGC  600

seq1  TGAGTAGTGAGTGAGTCGTCTTTCCTACCGTCAGTCAGGTTCCAGGTTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTAGTGAGTGAGTCGTCTTTCCTACCGTCAGTCAGGTTCCAGGTTGG  650

seq1  TGGTCACCCCCTCAGCTGAGGAAAATGCACTTAGGTTGAATTC  693
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCACCCCCTCAGCTGAGGAAAATGCACTTAGGTTGAATTC  693

seq1: chr4_57436401_57437497
seq2: B6Ng01-256G15.g_67_1168

seq1  GAATTCAGTCGAGAGACACAAGTACTTTTAGTAAAGCAAAGCTCTCCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCGAGAGACACAAGTACTTTTAGTAAAGCAAAGCTCTCCAAA  50

seq1  GAGCGATGAGAGTGGGTTGTCCTGAAGCAGACACTGCACTGTGGATTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCGATGAGAGTGGGTTGTCCTGAAGCAGACACTGCACTGTGGATTTTA  100

seq1  AAGAAGCATTTAATAAATATTTATGAGTTAGGTGGCATATTCACGGATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGCATTTAATAAATATTTATGAGTTAGGTGGCATATTCACGGATAA  150

seq1  GGTGACTCTATTCCTCCCCGAACAATGGTGGATTAAGTCTCCCTTTTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACTCTATTCCTCCCCGAACAATGGTGGATTAAGTCTCCCTTTTAGA  200

seq1  GTATTCCTCCCATAGGGAGGGGAATAAAATCTAATTGATGACATAATGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCCTCCCATAGGGAGGGGAATAAAATCTAATTGATGACATAATGAA  250

seq1  GTCGGAATCTTTTGAGGATGCAGACCCTTCGTTAGGTGTGGCAGTTGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGGAATCTTTTGAGGATGCAGACCCTTCGTTAGGTGTGGCAGTTGGGA  300

seq1  CAGTGTCCTGGTGCCTTAGTTTCTGATACAGCAAGAGTAACCTAACTGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTCCTGGTGCCTTAGTTTCTGATACAGCAAGAGTAACCTAACTGCA  350

seq1  ACTTCAAGGTTATTTAACCACAGTGGGCATCTTCAGTCAGGGGACATAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAAGGTTATTTAACCACAGTGGGCATCTTCAGTCAGGGGACATAGT  400

seq1  GACTAAGACAGAGCTGCAGGCTTTCTTAGTTAATTCTTGCCTAGTGCGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAAGACAGAGCTGCAGGCTTTCTTAGTTAATTCTTGCCTAGTGCGTA  450

seq1  TTAGAGGAACACGAGAGACTCTCTTCTCCATCGTATTCTTATCTTGCTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGGAACACGAGAGACTCTCTTCTCCATCGTATTCTTATCTTGCTGC  500

seq1  CTAGCGGGTATCAGAAGAACACGAGAGACTCTCTTCTCCATCGTATTGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCGGGTATCAGAAGAACACGAGAGACTCTCTTCTCCATCGTATTGCC  550

seq1  ACTCGTGAGGTTACAGATTTCCCTTGGGTTTCTTGAAATCCCCCTTTCGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCGTGAGGTTACAGATTTCCCTTGGGTTTCTTGAAATCCCCCTTTCGT  600

seq1  GCCTCCTTGAGTTTTCTGGTTTTGACCTTTGCTTGTTGTTAGATCTGGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCTTGAGTTTTCTGGTTTTGACCTTTGCTTGTTGTTAGATCTGGTG  650

seq1  TCCTCGCCTCACCCCAGTGGAGACTTGGCAGCCAGACCCTGCTTTGGGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCGCCTCACCCCAGTGGAGACTTGGCAGCCAGACCCTGCTTTGGGTA  700

seq1  CTGATTAGGGTAGGAGGCCACTCTCCTCTTCACAGGCGAACTGTAGATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTAGGGTAGGAGGCCACTCTCCTCTTCACAGGCGAACTGTAGATAT  750

seq1  GCATCAGAGGAGCACAATGTCATCTAGGACTTTTATTTTTTCCTTCTATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCAGAGGAGCACAATGTCATCTAGGACTTTTATTTTTTCCTTCTATC  800

seq1  TTACAGAGCCAAATCCCAGGATTAGTCTAGAAAGGATGGCTGCATCTTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGAGCCAAATCCCAGGATTAGTCTAGAAAGGATGGCTGCATCTTAC  850

seq1  TTGGATGGGGGTGTCTTCTGATCTACACAATGTCT-GGCCAATGTACATT  899
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TTGGATGGGGGTGTCTTCTGATCTACACAATGTCTGGGCCAATGTACATT  900

seq1  GATCAATTCACATTGATCT-GGCTAATCTGTTGCCTTAGACTGCAATTTT  948
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GATCAATTCACATTGATCTGGGCTAATCTGTTGCCTTAGACTGCAATTTT  950

seq1  TAATGTTAAGTCAAATCTTTGCATGCATGTGTACATGTGTATGTAGGTGT  998
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATG-TAAGTCAAATCTTTGCATGCATGTGTACATGTGTATGTAGGTGT  999

seq1  ATGTGCATGTGTGTGCATGCAAATAAA-GACCAGA-GGTTGACGACCAGT  1046
      ||||||||||||||||||||||||||| ||||||| ||||||||||||||
seq2  ATGTGCATGTGTGTGCATGCAAATAAAGGACCAGAGGGTTGACGACCAGT  1049

seq1  GTGTTCCCCAATTGCTTTCCATCTT--ATTTTTGAG-ACAAGGTTTCTCA  1093
      |||||||| | ||||||| ||||||   |||||||| |||||||||||||
seq2  GTGTTCCCGATTTGCTTT-CATCTTTATTTTTTGAGAACAAGGTTTCTCA  1098

seq1  CTGA  1097
      ||||
seq2  CTGA  1102