BAC Information

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BAC

Clone NameB6Ng01-256G23
Chromosome9 (Build37)4 (Build37)
Map Location 85,024,296 - 85,025,471150,429,528 - 150,430,618
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG666669, LOC666672
Downstream geneBC023892, Ibtk, 4933431K14Rik, EG434426, 9330154J02Rik, Tpbg
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-256G23.bB6Ng01-256G23.g
ACCGA062395GA062396
length1,1851,107
definitionB6Ng01-256G23.b B6Ng01-256G23.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(85,024,296 - 85,025,471)(150,429,528 - 150,430,618)
sequence
gaattcatggatgtagcttttgtgtgtcctaggtagaggatagaatttct
caggagacaatctgtgataaaagcagactgattctaatcatgaaaaatat
gtaacatactctccttgtgtatttaaaaggaaccaagagaagataccttc
tactaggctacttttaataacttcggttcatcaataaaaccattgcatag
ggaaatataaaccaagaagaagtatgcatgtctagtgcatgtgatgggga
tgcatcttcacacatgcagaaatggaagcatacaactaaaggtctttaat
ttagagtccacacgcctctagtccagagttggggaatgggtaacaaatgc
agaaaacaatttttttaatcccctgtgaaacttgtttttcttcatacaat
tccctggatcggcgttatacagagcattctcaccttggcaaggatcccac
tctggaagttagaggtcccttgataattttattggttgtgttttgttttt
atttttgcaaataaaataaaagaactattcagtctaactgaagcaagaat
cagctttatacaactacagtgaaagaggctcttttgtatggcttacactt
gctgaatgttttctctatgaaaagggtttcctctatgaatattggaagtg
agtgtcattatgtcccacattatatgtgctttctatcagcatcaacaatg
gagcagagtcctttttgtttttttgttttctttttttcttctttggtaac
ccttaacatcataagtgaggatccgtatagaaaagtgttttggcttcaac
atgaacacaagttggctacagccaagtattatatgatatgatatctaaga
caggcacaacaccatgctggaattaattttatgacagaataagatccatt
ctttccaagaagaaacttgcctgatatacccagaaaaagaaaaggtacta
ttctggattaaattgtgcatcccacacaaaatgacacattcaaatcttat
ttctcagtgccctcaatacgtgaccttgtttggaaacaagaattacagtt
acaagtaggaaatagatcatatgaagtagtgttgactgttctaacccaat
atgtcagaaattggaataggaaagggtgtaaacatgtgtacttgactgga
caaccattagaatctagcactggccaagagtggca

gaattctagggagagctggggctacagcagttccacctgctatgggtcct
tcaacaaatatcagagaaagcaaagacctgcctctattagggaactagta
aacctggctataagacacacaacaatttggaaacaaaacaaaacccaaat
cagaaagacttgttcctggcttgaataatccaattaccctatcttacaag
tggctctggggacaagctttcagatatgttttaggtttgtaattggtagt
agaaaaattagtatgaaaccaggaagagtctcctttgtgcttagaagatg
gcttctagaacattcaggcaaagcatcatatacataaaataaaaataaac
ctaaacaaaaagaatatggaaatacttgtctgagtttctcgcagaatctg
tactattgccctttaaatacacgtttaaaaagatgacttctgatatagtc
aaaatttatgcccacacactgctgatgccttttttctctaatgttttaaa
aaaataattacatgcttgtgtctgtgtgtacaggtgcatgcatgtgccct
tggaggcagttacaagcagtttcgtgatacaaatgagagtgcttggaacc
caggtggatcctctgctagaacaagtaagtgttcttttaactcccgagac
atctttctagctccaacgactctttttctaaataaaattctagagaattc
ccatgtttgtttaaaagtcacatttaaaattttagagtggtacctcatct
acttgattttgtgtctgctggagtcttcgattactgccagtggcagcact
tgaccccgaaaggcacacctgtagacctgaaaggtataaagtcacaagta
tgagtacactgtaattccccagtgcacttgataagctaatatataatccc
caatgctccaaccatgacatgggaggtggaccacatgagagtcttggaag
cctgagggccagctcacctgatacatgcagccactgaacaagagatagtg
tcctccaataaggtggaaagccaggactgacaatgtgaggttgttcctcc
ttgctccttccaagtgtcccttgcctctctcagtataccaatggccctgt
tttgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_85024296_85025471
seq2: B6Ng01-256G23.b_51_1235

seq1  GAATTCATGGATGTAGCTTTTGTGTGTCCTAGGTAGAGGATAGAATTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGGATGTAGCTTTTGTGTGTCCTAGGTAGAGGATAGAATTTCT  50

seq1  CAGGAGACAATCTGTGATAAAAGCAGACTGATTCTAATCATGAAAAATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGACAATCTGTGATAAAAGCAGACTGATTCTAATCATGAAAAATAT  100

seq1  GTAACATACTCTCCTTGTGTATTTAAAAGGAACCAAGAGAAGATACCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACATACTCTCCTTGTGTATTTAAAAGGAACCAAGAGAAGATACCTTC  150

seq1  TACTAGGCTACTTTTAATAACTTCGGTTCATCAATAAAACCATTGCATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGGCTACTTTTAATAACTTCGGTTCATCAATAAAACCATTGCATAG  200

seq1  GGAAATATAAACCAAGAAGAAGTATGCATGTCTAGTGCATGTGATGGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATATAAACCAAGAAGAAGTATGCATGTCTAGTGCATGTGATGGGGA  250

seq1  TGCATCTTCACACATGCAGAAATGGAAGCATACAACTAAAGGTCTTTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCTTCACACATGCAGAAATGGAAGCATACAACTAAAGGTCTTTAAT  300

seq1  TTAGAGTCCACACGCCTCTAGTCCAGAGTTGGGGAATGGGTAACAAATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGTCCACACGCCTCTAGTCCAGAGTTGGGGAATGGGTAACAAATGC  350

seq1  AGAAAACAATTTTTTTAATCCCCTGTGAAACTTGTTTTTCTTCATACAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACAATTTTTTTAATCCCCTGTGAAACTTGTTTTTCTTCATACAAT  400

seq1  TCCCTGGATCGGCGTTATACAGAGCATTCTCACCTTGGCAAGGATCCCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGGATCGGCGTTATACAGAGCATTCTCACCTTGGCAAGGATCCCAC  450

seq1  TCTGGAAGTTAGAGGTCCCTTGATAATTTTATTGGTTGTGTTTTGTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAAGTTAGAGGTCCCTTGATAATTTTATTGGTTGTGTTTTGTTTTT  500

seq1  ATTTTTGCAAATAAAATAAAAGAACTATTCAGTCTAACTGAAGCAAGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGCAAATAAAATAAAAGAACTATTCAGTCTAACTGAAGCAAGAAT  550

seq1  CAGCTTTATACAACTACAGTGAAAGAGGCTCTTTTGTATGGCTTACACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTTATACAACTACAGTGAAAGAGGCTCTTTTGTATGGCTTACACTT  600

seq1  GCTGAATGTTTTCTCTATGAAAAGGGTTTCCTCTATGAATATTGGAAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAATGTTTTCTCTATGAAAAGGGTTTCCTCTATGAATATTGGAAGTG  650

seq1  AGTGTCATTATGTCCCACATTATATGTGCTTTCTATCAGCATCAACAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCATTATGTCCCACATTATATGTGCTTTCTATCAGCATCAACAATG  700

seq1  GAGCAGAGTCCTTTTTGTTTTTTTGTTTTCTTTTTTTCTTCTTTGGTAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGAGTCCTTTTTGTTTTTTTGTTTTCTTTTTTTCTTCTTTGGTAAC  750

seq1  CCTTAACATCATAAGTGAGGATCCGTATAGAAAAGTGTTTTGGCTTCAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAACATCATAAGTGAGGATCCGTATAGAAAAGTGTTTTGGCTTCAAC  800

seq1  ATGAACACAAGTTGGCTACAGCCAAGTATTATATGATATGATATCTAAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACACAAGTTGGCTACAGCCAAGTATTATATGATATGATATCTAAGA  850

seq1  CAGGCACAACACCATGCTGGAATTAATTTTATGACAGAATAAGATCCATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCACAACACCATGCTGGAATTAATTTTATGACAGAATAAGATCCATT  900

seq1  CTTTCCAAGAAGAAACTTGCCTGATATACCCAGAAAAAGAAAAGGTACTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCAAGAAGAAACTTGCCTGATATACCCAGAAAAAGAAAAGGTACTA  950

seq1  TTCTGGATTAAATTGTGCATCCCACACAAAATGACACATTCAAATCTTAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGATTAAATTGTGCATCCCACACAAAATGACACATTCAAATCTTAT  1000

seq1  TTCTCAGTGCCCTC-ATACGTGACCTTGTTTGGAAACAAGAA-TACAGGT  1048
      |||||||||||||| ||||||||||||||||||||||||||| ||||| |
seq2  TTCTCAGTGCCCTCAATACGTGACCTTGTTTGGAAACAAGAATTACAGTT  1050

seq1  ACAAGTAAGGAAATAGATCATAATGGAGTAGTG-TGACTG-TCTAACCCA  1096
      |||||| |||||||||||||| ||| ||||||| |||||| |||||||||
seq2  ACAAGT-AGGAAATAGATCAT-ATGAAGTAGTGTTGACTGTTCTAACCCA  1098

seq1  ATATGGACAGAAATTGGAATAGGGAA-GGTGTAAACCAATGTGTACTGAG  1145
      |||| | |||||||||||||||| || |||||||||  |||||||||   
seq2  ATAT-GTCAGAAATTGGAATAGGAAAGGGTGTAAAC--ATGTGTACTTGA  1145

seq1  CTGACAAACCATTAGAATCTAGGA---------AGTGGCA  1176
      |||   |||||||||||||||| |         |||||||
seq2  CTGGACAACCATTAGAATCTAGCACTGGCCAAGAGTGGCA  1185


seq1: chr4_150429528_150430618
seq2: B6Ng01-256G23.g_66_1172

seq1  GAATTCTAGGGAGAGCTGGGGCTACAGCAGTTCCACCTGCTATGGGTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGGAGAGCTGGGGCTACAGCAGTTCCACCTGCTATGGGTCCT  50

seq1  TCAACAAATATCAGAGAAAGCAAAGACCTGCCTCTATTAGGGAACTAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACAAATATCAGAGAAAGCAAAGACCTGCCTCTATTAGGGAACTAGTA  100

seq1  AACCTGGCTATAAGACACACAACAATTTGGAAACAAAACAAAACCCAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGGCTATAAGACACACAACAATTTGGAAACAAAACAAAACCCAAAT  150

seq1  CAGAAAGACTTGTTCCTGGCTTGAATAATCCAATTACCCTATCTTACAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGACTTGTTCCTGGCTTGAATAATCCAATTACCCTATCTTACAAG  200

seq1  TGGCTCTGGGGACAAGCTTTCAGATATGTTTTAGGTTTGTAATTGGTAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCTGGGGACAAGCTTTCAGATATGTTTTAGGTTTGTAATTGGTAGT  250

seq1  AGAAAAATTAGTATGAAACCAGGAAGAGTCTCCTTTGTGCTTAGAAGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAATTAGTATGAAACCAGGAAGAGTCTCCTTTGTGCTTAGAAGATG  300

seq1  GCTTCTAGAACATTCAGGCAAAGCATCATATACATAAAATAAAAATAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTAGAACATTCAGGCAAAGCATCATATACATAAAATAAAAATAAAC  350

seq1  CTAAACAAAAAGAATATGGAAATACTTGTCTGAGTTTCTCGCAGAATCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACAAAAAGAATATGGAAATACTTGTCTGAGTTTCTCGCAGAATCTG  400

seq1  TACTATTGCCCTTTAAATACACGTTTAAAAAGATGACTTCTGATATAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATTGCCCTTTAAATACACGTTTAAAAAGATGACTTCTGATATAGTC  450

seq1  AAAATTTATGCCCACACACTGCTGATGCCTTTTTTCTCTAATGTTTTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTATGCCCACACACTGCTGATGCCTTTTTTCTCTAATGTTTTAAA  500

seq1  AAAATAATTACATGCTTGTGTCTGTGTGTACAGGTGCATGCATGTGCCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAATTACATGCTTGTGTCTGTGTGTACAGGTGCATGCATGTGCCCT  550

seq1  TGGAGGCAGTTACAAGCAGTTTCGTGATACAAATGAGAGTGCTTGGAACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGCAGTTACAAGCAGTTTCGTGATACAAATGAGAGTGCTTGGAACC  600

seq1  CAGGTGGATCCTCTGCTAGAACAAGTAAGTGTTCTTTTAACTCCCGAGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGGATCCTCTGCTAGAACAAGTAAGTGTTCTTTTAACTCCCGAGAC  650

seq1  ATCTTTCTAGCTCCAACGACTCTTTTTCTAAATAAAATTCTAGAGAATTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTCTAGCTCCAACGACTCTTTTTCTAAATAAAATTCTAGAGAATTC  700

seq1  CCATGTTTGTTTAAAAGTCACATTTAAAATTTTAGAGTGGTACCTCATCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTTTGTTTAAAAGTCACATTTAAAATTTTAGAGTGGTACCTCATCT  750

seq1  ACTTGATTTTGTGTCTGCTGGAGTCTTCGATTACTGCCAGTGGCAGCACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGATTTTGTGTCTGCTGGAGTCTTCGATTACTGCCAGTGGCAGCACT  800

seq1  TGACCCCG-AAGGCACACCTGTAGACCTGAAAGGTATAAAGTCACAAGTA  849
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCCGAAAGGCACACCTGTAGACCTGAAAGGTATAAAGTCACAAGTA  850

seq1  TGAGTACACTGTAATT-CCCAGTGCACTTGATAAGCTAATATATAAT-CC  897
      |||||||||||||||| |||||||||||||||||||||||||||||| ||
seq2  TGAGTACACTGTAATTCCCCAGTGCACTTGATAAGCTAATATATAATCCC  900

seq1  CAATGCTCCAACCATGACATGGGAGGTGGA-CACATGAGAGTCTTGGAAG  946
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CAATGCTCCAACCATGACATGGGAGGTGGACCACATGAGAGTCTTGGAAG  950

seq1  CCTGAGGGCCAGCTCACCTGATACATGCAG-CACTGAACAAGAGATAGTG  995
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CCTGAGGGCCAGCTCACCTGATACATGCAGCCACTGAACAAGAGATAGTG  1000

seq1  T-CTCCAATAAGGTGGAAAGCCAGGACTGAC-ATGTGAGGTTGTT-CTC-  1041
      | ||||||||||||||||||||||||||||| ||||||||||||| ||| 
seq2  TCCTCCAATAAGGTGGAAAGCCAGGACTGACAATGTGAGGTTGTTCCTCC  1050

seq1  -TGCTC---TCAAGTGTCCTTTG-CTCTC-AAGTATACC-ATGG-CCTGT  1083
       |||||    ||||||||| ||| |||||  |||||||| |||| |||||
seq2  TTGCTCCTTCCAAGTGTCCCTTGCCTCTCTCAGTATACCAATGGCCCTGT  1100

seq1  TTGTGTGT  1091
      || |||||
seq2  TT-TGTGT  1107


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