BAC Information

Click to search

BAC

Clone NameB6Ng01-256J04
Chromosome4 (Build37)
Map Location 34,635,372 - 34,636,423
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041919, LOC100041924, Cnr1, Spaca1, LOC100039220, LOC665361, LOC665367, 2700059D21Rik, Orc3l, Rars2, Slc35a1
Downstream gene1700003M02Rik, Gm136, 1810030N24Rik, Zfp292, Cga, Mobkl2b, Ifnk, 3110043O21Rik, LOC620559, LOC621227
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-256J04.bB6Ng01-256J04.g
ACCGA062497GA062498
length1,040549
definitionB6Ng01-256J04.b B6Ng01-256J04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaggacctgaaaacccaactgcttatgagccaaataaggccgc
agagtgggaagtgggaagcgcttaagccacagcgggctctgaggcagaca
acagagcataaaaggatcaagctggaatgccagccagtcttatcagacat
tctgatttttttcaatgagcccaaaattcaaatataaatatcaattctct
ggcttttaaaaggcagcatatgaatgtaggcttcacttgttccagatagc
aaggctcatgatatagaaatctgttatcactaaatagcaatgaagcagag
cgttgtgtttcagagtgtcagggcttaacattttgtagggttttagaagc
agcctctattccagtgataagcatactactatctagctggcattgcaatg
tcaatcttaatgctgtaaactttgtctaaaatataaaacaaatacgcgga
cagagttttacttgtcaattttaataaaacgaaaaatgtactacagaaac
tgcttttagatttgcataacagtcaggcaggatacggtgccctagtgcac
agtcacacaaccagtgactgtgccagccccgcaaatgagctttatacacg
cacagcactttaaaccctccatccgtgccactaaggagcagcttcctgta
aacgtccatctctaggtttcgtccaccgctctggttaagttcaccttcac
cccataggttgttttgctttgtcccccacgaaggccagctatgaaaatct
ggggcctgggcactcggctgctgccttctctcttggactgggtgctagcc
tctttcaaagggtacacctgtgaggtgttatctcttctcatgtggctaaa
gtcagtctggacggagtgagtaattttctggcgcaaattagcctagtaga
aagagaacatagggaataatgtttctctaaaaaaatgtaaaaaatcagca
tttagtaatgtttgcctattactttcatttcacaataaatatgcattttt
ctatgatgtgagatgatgatgacaggagctgagggtgggg
attggcacaggaaagaggtctttccaaacagaatgcaaatagcatgggaa
ttaaaaccagtgattgataaacagaatctcatgaaacctttaaaaagtgt
gtgtaaaacatggaccctatcatttgaatgaagaggcagcttaaggaata
gtcaaaaactctacccattaaatatctgacagaaggtcagtatctagact
cactaaaccacacatgcacacacacacacacacacacacacacacacaca
cacacacacaaaacctcaatgaggtagtttgagtgactctggccccaata
tgtttgaatgctttgtctgcagtttgtggaactgtttgggaaggattagg
aggtatggtcttgttggagaaagtgtggctttgttggagtgggtgtgtca
cagtgagtcctgcatctatctgtatctgtatctgtatctgtatctgtatc
tgtatctgtatctgtatctgtatctgtatctgtatctatctgtatctgta
cctgtatctgtggctctctctctctctctctctctctctctcactctgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_34635372_34636423
seq2: B6Ng01-256J04.b_44_1083

seq1  GAATTCTCAGGACCTGAAAACCCAACTGCTTATGAGCCAAATAAGGCCGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGGACCTGAAAACCCAACTGCTTATGAGCCAAATAAGGCCGC  50

seq1  AGAGTGGGAAGTGGGAAGCGCTTAAGCCACAGCGGGCTCTGAGGCAGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGGGAAGTGGGAAGCGCTTAAGCCACAGCGGGCTCTGAGGCAGACA  100

seq1  ACAGAGCATAAAAGGATCAAGCTGGAATGCCAGCCAGTCTTATCAGACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGCATAAAAGGATCAAGCTGGAATGCCAGCCAGTCTTATCAGACAT  150

seq1  TCTGATTTTTTTCAATGAGCCCAAAATTCAAATATAAATATCAATTCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATTTTTTTCAATGAGCCCAAAATTCAAATATAAATATCAATTCTCT  200

seq1  GGCTTTTAAAAGGCAGCATATGAATGTAGGCTTCACTTGTTCCAGATAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTTAAAAGGCAGCATATGAATGTAGGCTTCACTTGTTCCAGATAGC  250

seq1  AAGGCTCATGATATAGAAATCTGTTATCACTAAATAGCAATGAAGCAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTCATGATATAGAAATCTGTTATCACTAAATAGCAATGAAGCAGAG  300

seq1  CGTTGTGTTTCAGAGTGTCAGGGCTTAACATTTTGTAGGGTTTTAGAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTGTGTTTCAGAGTGTCAGGGCTTAACATTTTGTAGGGTTTTAGAAGC  350

seq1  AGCCTCTATTCCAGTGATAAGCATACTACTATCTAGCTGGCATTGCAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCTATTCCAGTGATAAGCATACTACTATCTAGCTGGCATTGCAATG  400

seq1  TCAATCTTAATGCTGTAAACTTTGTCTAAAATATAAAACAAATACGCGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCTTAATGCTGTAAACTTTGTCTAAAATATAAAACAAATACGCGGA  450

seq1  CAGAGTTTTACTTGTCAATTTTAATAAAACGAAAAATGTACTACAGAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTTTTACTTGTCAATTTTAATAAAACGAAAAATGTACTACAGAAAC  500

seq1  TGCTTTTAGATTTGCATAACAGTCAGGCAGGATACGGTGCCCTAGTGCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTAGATTTGCATAACAGTCAGGCAGGATACGGTGCCCTAGTGCAC  550

seq1  AGTCACACAACCAGTGACTGTGCCAGCCCCGCAAATGAGCTTTATACACG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACACAACCAGTGACTGTGCCAGCCCCGCAAATGAGCTTTATACACG  600

seq1  CACAGCACTTTAAACCCTCCATCCGTGCCACTAAGGAGCAGCTTCCTGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCACTTTAAACCCTCCATCCGTGCCACTAAGGAGCAGCTTCCTGTA  650

seq1  AACGTCCATCTCTAGGTTTCGTCCACCGCTCTGGTTAAGTTCACCTTCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTCCATCTCTAGGTTTCGTCCACCGCTCTGGTTAAGTTCACCTTCAC  700

seq1  CCCATAGGTTGTTTTGCTTTGTCCCCCACGAAGGCCAGCTATGAAAATCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATAGGTTGTTTTGCTTTGTCCCCCACGAAGGCCAGCTATGAAAATCT  750

seq1  GGGGCCTGGGCACTCGGCTGCTGCCTTCTCTCTTGGACTGGGTGCTAGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCCTGGGCACTCGGCTGCTGCCTTCTCTCTTGGACTGGGTGCTAGCC  800

seq1  TCTTTCAAAGGGTACACCTGTGAGGTGTTATCTCTTCTCATGTGGCTAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TCTTTCAAAGGGTACACCTGTGAGGTGTTATCTCTTCTCATGTGGCTAAA  850

seq1  GTCAGTCTGGACGGAGTGAGTAATTTTCTGGCGCAAATTAGCCTAGGTAG  900
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GTCAGTCTGGACGGAGTGAGTAATTTTCTGGCGCAAATTAGCCTA-GTAG  899

seq1  AAAGAGAACATAGGGAATAATGTTTCTCTAAAAAAATGTAAAAAATCAGG  950
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AAAGAGAACATAGGGAATAATGTTTCTCTAAAAAAATGTAAAAAATCA-G  948

seq1  CATTTAGTTAATGTTTGCCTATTAACTTTCCATTTCACAAATAAATAATG  1000
      ||||||| ||||||||||||||| ||||| |||||||| ||||||| |||
seq2  CATTTAG-TAATGTTTGCCTATT-ACTTT-CATTTCAC-AATAAAT-ATG  993

seq1  CATTTTTCTATGATGGTGAGGATGGATGATGACAGGGAGGCTGAGGGTGG  1050
      |||||||||||||| |||| ||| ||||||||||||   |||||||||||
seq2  CATTTTTCTATGAT-GTGA-GAT-GATGATGACAGG--AGCTGAGGGTGG  1038

seq1  GG  1052
      ||
seq2  GG  1040