BAC Information

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BAC

Clone NameB6Ng01-256P19
Chromosome4 (Build37)
Map Location 94,801,101 - 94,802,222
singlet/doubletsinglet
Overlap genenone
Upstream gene5830433M19Rik, Plaa, LOC667250, Lrrc19, Ift74, Tek, 4930579C15Rik, LOC100039252, Mysm1, LOC100039265, LOC665029, Jun
Downstream geneLOC100042411, 2310009E04Rik, Hook1, Cyp2j13, LOC242546
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-256P19.bB6Ng01-256P19.g
ACCGA062806GA062807
length1,1241,172
definitionB6Ng01-256P19.b B6Ng01-256P19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttaggctgatttattgcatcttgctgttattcttccagataggg
aaactgagtcacacagaataattttgtagtaacatagacacattttgtcc
ttagcgtgtccttggcatctgcatgttgaagtgccatgctatcctttctt
ctaatgtaactcatagtatgtcctcatatttgatgatatgacttggatta
atttaatccctggattagatggactcacaaagtgacagaatcctatggtt
attagctgctacagttctttcttccagatacccagattctgctgagttat
ctccagtggtggaataagctctctcctgtgtgggcttcctattcattgtg
ctacgcagtaattcaaagctggtggtggtctctcggtgtgaggagggagg
ctcccccatctcgctggttaactgtcttggcaaggtgccgagtgcatgct
gagtactaaatccgccctgtctcttgcctgaatttccccttgtctttcac
acattgaaaagaaaagaaagaatttgcttattgatcaactagctgaaaga
tgtttttacaaaacaatgtcaggttctttcctcatatgaaaagagactct
gtagagtaaggggatacagttgctgccttctctcttttgaatgcatcttc
ctttcccaagtgtttgagatggcacatttgctaagcaccaacttcaaaaa
gggatgaaacacattctctatctgtggggagtgcctatgagctgtgggaa
ctcaccacacaaataacctgcaattagaggagtgtgtgctggagaaaggg
agctcagcaataggaggaatgacaagtgacattcatataaagtctctaaa
gtccattgggtgctatttctgctacctcctagtgagcttattctatgcaa
gagagagaaatgtttggacttggcacagtataaaattgccctccagatac
atggtttatcagaagagaagaagaagttacaacagaaatttgcaatcaat
tattactcatacctctttctcatatgtacagacctggcttttgcttttta
atgtatgccagggttctttctctgggcctatttctctcctcctcctccac
cacctcggccccactaattgaccc
gaattcccctttctctttggttagtggatacaagggagctgccagtgtgg
caaatccgggaatccagagtctgcaaaacccggcggtccccaggaactct
cttacctggcgagcagtggttggggtcgggatctgcataacagcttgttt
tctggcttctgtgagccaccgttgtccatctctcaagacatatcctaggt
aggtcacttctatctggcataactgagcctttttagcagaggcccgatac
cccagcttacttaactcgcccaggaggttttgggtcccaattttacagtc
ctcgcgtgtttctgcagctaggagcaggtcatctacatattgcagaagag
tcacctgtgggttattggctcggaaaagagcaagatctcggtgtagggct
tcatcgaacaaagtgggcgagttcttgaatccctgaggcagcctcgtcca
tgtgagctgtccggcttgtccactctcggagtctcgccattcgaaagcaa
acaagggctggctgttggggtgtaacctcaaacagaaaaaagcgtctttg
agatccaggactgtgtaccatgtccgaccaggtggcaaggtgctgaggag
gttataaggatttggcaccgtggggtgtatgtcctgaactctcttgttga
cttctctaaggtcttgtactggacggtagtccctggtccctggttttttt
actggaagtagaggagtgttccaaggggatttgcatgggaccaaaatccc
ttgttggagcagtttgttaatttgggggcgtataccctcttgagcttctc
tgctcatgggatattgtcggacccctataggggtggccccggacttaagt
tcaatcaccacgggggggaccagttttgccatccccactcctcccgtctc
tgcccacgcctggggttatcgattcaccagttcctgtaatccctcagggg
gcttactttattttggtaaagtcgatatcctccccctagttgtaaagaca
gctctagagtctggggcgctttttatccccagaaaaccttctgtcgatga
gaggtgaaggtatttgtgcttttacctgattagtaagtctcttcccaata
aagggcatatgaacctctggtatgacttagaaccgaatgagtactcgcaa
tttgtccccccactagtgctca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_94801101_94802222
seq2: B6Ng01-256P19.b_47_1170

seq1  GAATTCTTAGGCTGATTTATTGCATCTTGCTGTTATTCTTCCAGATAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGGCTGATTTATTGCATCTTGCTGTTATTCTTCCAGATAGGG  50

seq1  AAACTGAGTCACACAGAATAATTTTGTAGTAACATAGACACATTTTGTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGAGTCACACAGAATAATTTTGTAGTAACATAGACACATTTTGTCC  100

seq1  TTAGCGTGTCCTTGGCATCTGCATGTTGAAGTGCCATGCTATCCTTTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCGTGTCCTTGGCATCTGCATGTTGAAGTGCCATGCTATCCTTTCTT  150

seq1  CTAATGTAACTCATAGTATGTCCTCATATTTGATGATATGACTTGGATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGTAACTCATAGTATGTCCTCATATTTGATGATATGACTTGGATTA  200

seq1  ATTTAATCCCTGGATTAGATGGACTCACAAAGTGACAGAATCCTATGGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATCCCTGGATTAGATGGACTCACAAAGTGACAGAATCCTATGGTT  250

seq1  ATTAGCTGCTACAGTTCTTTCTTCCAGATACCCAGATTCTGCTGAGTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCTGCTACAGTTCTTTCTTCCAGATACCCAGATTCTGCTGAGTTAT  300

seq1  CTCCAGTGGTGGAATAAGCTCTCTCCTGTGTGGGCTTCCTATTCATTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGTGGTGGAATAAGCTCTCTCCTGTGTGGGCTTCCTATTCATTGTG  350

seq1  CTACGCAGTAATTCAAAGCTGGTGGTGGTCTCTCGGTGTGAGGAGGGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACGCAGTAATTCAAAGCTGGTGGTGGTCTCTCGGTGTGAGGAGGGAGG  400

seq1  CTCCCCCATCTCGCTGGTTAACTGTCTTGGCAAGGTGCCGAGTGCATGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCCATCTCGCTGGTTAACTGTCTTGGCAAGGTGCCGAGTGCATGCT  450

seq1  GAGTACTAAATCCGCCCTGTCTCTTGCCTGAATTTCCCCTTGTCTTTCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTACTAAATCCGCCCTGTCTCTTGCCTGAATTTCCCCTTGTCTTTCAC  500

seq1  ACATTGAAAAGAAAAGAAAGAATTTGCTTATTGATCAACTAGCTGAAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGAAAAGAAAAGAAAGAATTTGCTTATTGATCAACTAGCTGAAAGA  550

seq1  TGTTTTTACAAAACAATGTCAGGTTCTTTCCTCATATGAAAAGAGACTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTACAAAACAATGTCAGGTTCTTTCCTCATATGAAAAGAGACTCT  600

seq1  GTAGAGTAAGGGGATACAGTTGCTGCCTTCTCTCTTTTGAATGCATCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGTAAGGGGATACAGTTGCTGCCTTCTCTCTTTTGAATGCATCTTC  650

seq1  CTTTCCCAAGTGTTTGAGATGGCACATTTGCTAAGCACCAACTTCAAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCCAAGTGTTTGAGATGGCACATTTGCTAAGCACCAACTTCAAAAA  700

seq1  GGGATGAAACACATTCTCTATCTGTGGGGAGTGCCTATGAGCTGTGGGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGAAACACATTCTCTATCTGTGGGGAGTGCCTATGAGCTGTGGGAA  750

seq1  CTCACCACACAAATAACCTGCAATTAGAGGAGTGTGTGCTGGAG-AAGGG  799
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTCACCACACAAATAACCTGCAATTAGAGGAGTGTGTGCTGGAGAAAGGG  800

seq1  AGCTCAGCAATAGGAGGAATGACAAGTGACATTCATATAAAGTCTCTAAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AGCTCAGCAATAGGAGGAATGACAAGTGACATTCATATAAAGTCTCTAAA  850

seq1  GTCCATTGGGTGCTATTTCTGCTACCTCCTAGTGAGCTTATTCTATGCAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATTGGGTGCTATTTCTGCTACCTCCTAGTGAGCTTATTCTATGCAA  900

seq1  GAGAGAGAAATGTTTGGACTTGGCACAGTATAAAATTGCCCTCCAGATAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAAATGTTTGGACTTGGCACAGTATAAAATTGCCCTCCAGATAC  950

seq1  ATGGTTTATCAGAAGAAGAAGAAGAAGTTACAACAGAAATTTGCAATCAA  999
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ATGGTTTATCAGAAG-AGAAGAAGAAGTTACAACAGAAATTTGCAATCAA  999

seq1  TTA-TACCCATACCTCTTTCTCATATGTACAAGGACCTGGCTTTTGCTTT  1048
      ||| ||| |||||||||||||||||||||||  |||||||||||||||||
seq2  TTATTACTCATACCTCTTTCTCATATGTACA--GACCTGGCTTTTGCTTT  1047

seq1  TTAATGTATGCCA-GGTTCTTTCCTCCTGGCCTATTTCTCTC--CCCCCC  1095
      ||||||||||||| |||||||| |||  ||||||||||||||  || || 
seq2  TTAATGTATGCCAGGGTTCTTT-CTCTGGGCCTATTTCTCTCCTCCTCCT  1096

seq1  CCAACACCTCGG-CCCACTAATTTACCC  1122
      ||| |||||||| |||||||||| ||||
seq2  CCACCACCTCGGCCCCACTAATTGACCC  1124