BAC Information

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BAC

Clone NameB6Ng01-257G03
Chromosome4 (Build37)
Map Location 147,373,904 - 147,541,575
singlet/doubletdoublet
Overlap geneNppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2
Upstream geneLOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb
Downstream genePtchd2, Ubiad1, Frap1, Angptl7, Exosc10, LOC100043151, Srm, Masp2, Tardbp, Gm572, LOC100041733, LOC100041742, LOC100041755, Casz1, Pex14, LOC670864, Dffa, Cort, Apitd1, LOC666774, Pgd
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257G03.bB6Ng01-257G03.g
ACCGA063098GA063099
length261759
definitionB6Ng01-257G03.b B6Ng01-257G03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(147,541,313 - 147,541,575)(147,373,904 - 147,374,662)
sequence
caaaggcaggcgatctgatgctttttcttttatgggcaccagaacgggtc
acacacacacacacacacacacacacacacacacacacacacacacacac
acacgtagtcccggaagacccaagacagagacttagaagcaattagacag
aagggtcaaggaactaaggcaagtcccagctcaggcggctgtcccacctc
accagcaggtggcaccaaaccacagactaaaagatgaaggcagagctggg
ggtgggggggg
gaattcatggctcacttccttggtctcaaaggtcatgaaggacattatgg
agaatggtgtatgtgtccccccctcaatcccttacctcctccttctattt
ccctgggaagggtgggaccaccacatatttcatgctcagagtctgggctt
tggaaagaagaaaagtggtttcatcctccaaacccatcctgttggcacct
tggacacgagtcttgggaggcagtaaaaataaactttagaggaaatatgc
tcttctaacatcccttggtgtttacacgtgtagctgaattctttagagcc
tgtatcatgttggcttcctggctgacttcatactctaaaaaaaaaataat
agctctttcacctgactgctaacagggacatctagggtgggggtgggctg
tctggggccagaggtccacccacgaggccgatgaatcaggtgtgaagcta
gctccagcatgtgtactccctggccagcctagctggcctcccagctgcct
gtcattgcctcctctcccgcccttatttggagcccctgacagctgagcag
caagcagggggagctgggtgcaggccagccgtcaccctctgcttccctgc
atgggtcctgttgccagggagaaagaatcctgaggcgagcgcccaggaag
ataaccaaggactcttttctgctcctctcacacctttgaagtgggggcct
cttgaggcaaatcagcaagaatgtgactcttgcagctgaaggtctggggg
aggggggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_147541313_147541575
seq2: B6Ng01-257G03.b_53_313 (reverse)

seq1  CCCCCCCCACCCCCAGCTCTGCCTTCATCTTTTAGTCTGTGGTTTGGTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCACCCCCAGCTCTGCCTTCATCTTTTAGTCTGTGGTTTGGTGC  50

seq1  CACCTGCTGGTGAGGTGGGACAGCCGCCTGAGCTGGGACTTGCCTTAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGCTGGTGAGGTGGGACAGCCGCCTGAGCTGGGACTTGCCTTAGTT  100

seq1  CCTTGACCCTTCTGTCTAATTGCTTCTAAGTCTCTGTCTTGGGTCTTCCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGACCCTTCTGTCTAATTGCTTCTAAGTCTCTGTCTTGGGTCTTCCG  150

seq1  GGACTACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  200
      |||||||  |||||||||||||||||||||||||||||||||||||||||
seq2  GGACTAC--GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  198

seq1  TGTGTGTGTGTGTGACCCGTTCTGGTGCCCATAAAAGAAAAAGCATCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGACCCGTTCTGGTGCCCATAAAAGAAAAAGCATCAGA  248

seq1  TCGCCTGCCTTTG  263
      |||||||||||||
seq2  TCGCCTGCCTTTG  261

seq1: chr4_147373904_147374662
seq2: B6Ng01-257G03.g_65_823

seq1  GAATTCATGGCTCACTTCCTTGGTCTCAAAGGTCATGAAGGACATTATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGGCTCACTTCCTTGGTCTCAAAGGTCATGAAGGACATTATGG  50

seq1  AGAATGGTGTATGTGTCCCCCCCTCAATCCCTTACCTCCTCCTTCTATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGGTGTATGTGTCCCCCCCTCAATCCCTTACCTCCTCCTTCTATTT  100

seq1  CCCTGGGAAGGGTGGGACCACCACATATTTCATGCTCAGAGTCTGGGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGGAAGGGTGGGACCACCACATATTTCATGCTCAGAGTCTGGGCTT  150

seq1  TGGAAAGAAGAAAAGTGGTTTCATCCTCCAAACCCATCCTGTTGGCACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAGAAGAAAAGTGGTTTCATCCTCCAAACCCATCCTGTTGGCACCT  200

seq1  TGGACACGAGTCTTGGGAGGCAGTAAAAATAAACTTTAGAGGAAATATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACACGAGTCTTGGGAGGCAGTAAAAATAAACTTTAGAGGAAATATGC  250

seq1  TCTTCTAACATCCCTTGGTGTTTACACGTGTAGCTGAATTCTTTAGAGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTAACATCCCTTGGTGTTTACACGTGTAGCTGAATTCTTTAGAGCC  300

seq1  TGTATCATGTTGGCTTCCTGGCTGACTTCATACTCTAAAAAAAAAATAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCATGTTGGCTTCCTGGCTGACTTCATACTCTAAAAAAAAAATAAT  350

seq1  AGCTCTTTCACCTGACTGCTAACAGGGACATCTAGGGTGGGGGTGGGCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTTTCACCTGACTGCTAACAGGGACATCTAGGGTGGGGGTGGGCTG  400

seq1  TCTGGGGCCAGAGGTCCACCCACGAGGCCGATGAATCAGGTGTGAAGCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGGCCAGAGGTCCACCCACGAGGCCGATGAATCAGGTGTGAAGCTA  450

seq1  GCTCCAGCATGTGTACTCCCTGGCCAGCCTAGCTGGCCTCCCAGCTGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCAGCATGTGTACTCCCTGGCCAGCCTAGCTGGCCTCCCAGCTGCCT  500

seq1  GTCATTGCCTCCTCTCCCGCCCTTATTTGGAGCCCCTGACAGCTGAGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTGCCTCCTCTCCCGCCCTTATTTGGAGCCCCTGACAGCTGAGCAG  550

seq1  CAAGCAGGGGGAGCTGGGTGCAGGCCAGCCGTCACCCTCTGCTTCCCTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAGGGGGAGCTGGGTGCAGGCCAGCCGTCACCCTCTGCTTCCCTGC  600

seq1  ATGGGTCCTGTTGCCAGGGAGAAAGAATCCTGAGGCGAGCGCCCAGGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTCCTGTTGCCAGGGAGAAAGAATCCTGAGGCGAGCGCCCAGGAAG  650

seq1  ATAACCAAGGACTCTTTTCTGCTCCTCTCACACCTTTGAAGTGGGGGCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCAAGGACTCTTTTCTGCTCCTCTCACACCTTTGAAGTGGGGGCCT  700

seq1  CTTGAGGCAAATCAGCAAGAATGTGACTCTTGCAGCTGAGGGTCTGGGGG  750
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTTGAGGCAAATCAGCAAGAATGTGACTCTTGCAGCTGAAGGTCTGGGGG  750

seq1  AGGGGGGTG  759
      |||||||||
seq2  AGGGGGGTG  759