BAC Information

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BAC

Clone NameB6Ng01-257H08
Chromosome4 (Build37)
Map Location 61,472,309 - 61,473,490
singlet/doubletsinglet
Overlap genenone
Upstream geneMup1, LOC620942, LOC100039008, LOC100039028, LOC620982, LOC100039054, LOC100039063, LOC667234, LOC100039089, LOC667239, LOC100039116, LOC667242, LOC100039150, LOC100039019, LOC100039177, LOC621093, LOC100039206, LOC621127, LOC100039228, LOC384021, LOC100039247, LOC667278
Downstream geneMup5, LOC435785, LOC667295, LOC100039305, LOC546832, OTTMUSG00000007485, Mup3, LOC100039345, OTTMUSG00000000231, Zfp37, Slc31a2, Fkbp15, Slc31a1, Cdc26, Prpf4, Rnf183, Wdr31, Bspry, Hdhd3, Alad, Pole3, 4933430I17Rik, Rgs3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257H08.bB6Ng01-257H08.g
ACCGA063153GA063154
length1,1691,212
definitionB6Ng01-257H08.b B6Ng01-257H08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttggaatttctgttagtagattagctgaactatatagtctgtaa
gccattttaataaacaattcacatacacgctgtaaggtttactcttctag
agaaccccacctaacacaataccacagaggaatttacatttgatttggaa
tgggtaagaagtaatgaagttatttgaaaaggaactggaatacaaaaaat
gtgtgatgccacataagctgagacaaactgtctaacaaaagaggaacaag
aacaggttcctatagagaaagagctcagattatctaaagtaacttcagta
gaagagtctaagtttggagacatgggtctagcccgctggcagtgagtggt
gggtgaccaggttaccgtgacaccataggttcaatccttagcacttgaag
aacaaaacaatatgactcacagattaaaggactagtatccatggcttttc
attggaaggttagcttgaaacatttgtaatgaaagatgagattaatcttt
taaagtagattaacaatagattctttggagttggagttacagatggttgt
gagccaccatgtgggtgcgataaaccaaacctaagtcctcggaaggaaca
gcctgtgcttttaactgatgatgcatctctccagtcccctgatttgttat
ttatatttatttgctatttatacgtttttagatttatttcatgtgtataa
gtgttttggctgcatgtatgtctgttcatcacatatatgattcatgcctg
aggaggccagaataaggtgtcagatattctgaaactggaggtttagacag
ttgtgatctatcatgtgtatgctggaaactgaattcaggtcgtatgtgag
ggcatcaagtgctcttaacactgagctatctctccagacgcaatttttct
atttttaaaagggactataatgagcacatgttctgtgctatagctcttca
gctactggcttcaaaatatacatataaatgtaatatgtatacacagagca
taaacctaacaggcacaaacaaagagccccagcagttggctgtagagaca
gtgccacactcagcttgtcagtagagggcatcgtgccctagcctgcactt
gcactgtgagtgctcacatttctagctcaacaaggttcaggttctactgg
gttaggttcttactctttc
gaattctttgtttagctctgtaccccacttttaatagggttatttggttc
tctgacatataacttcttgatttctgtctatatattgaagcccactatca
gatgtagagttggtaaagatcttttcccaatctattggttgctgttttgt
cctattgacagtgtcatttgccttacaaaagctttgcaattgtatgaggt
cccaattgtcaatttctaatcttaaagcataagctatggatgttctgttc
aaaaatgttcccatgttcccatgtgctcgaggctcttccctacttctttt
ctatcagtttcagtgtatctagttttatgaggaggtccttgatccacttg
gaattgagcttcgtagcagtagataagaatgcattgattttctttcttct
acatgctaactgccagttgagccagcaccatttgttgaaaatgctgtatt
ttccacgggatggtctagctcctttttcaaaaatcatgtgaccataggtg
tgtgggttcatttctgggtcttcaattctattctattgatctatcttcct
gtcaatgtaccaataccttgctgtttttttttttttatcacaattgctgt
gtagtgcagcttgaggtcagagatgttgattcccacataagttctcttat
tgttgagaatagtttttgccatcctaggtttttgttattatagatgaatt
ttcaaattgctcattctaactcgatgaagaattgagttggaattttgatg
ggtgtgcattgaatttatagattgcttttggcaagacgttcatttttact
atattaatcctgatcatgatccagttcatgatcatggggagaactttcca
tcttctgagatctttggtttctttcttcagagacttgaagttcttctcat
acagatcttttacttgcttagttagagtcaccaccaagttattttatatt
ttgtggactattatgaaagggtggttgtttctcaacttttcttttttcag
gcctatttattcttgggaataggaggaacggccactgattttgtttggag
taattttatatccagcaactttggctgaaggttgatattcagggtttaga
aggctctggtggtgggaatcttgggggttaataggtaactcctcaatcat
ctgcaaaattggataggtgaacttctcttcaagtgtgacactcacttgtg
gaccactctcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_61472309_61473490
seq2: B6Ng01-257H08.b_43_1211 (reverse)

seq1  GAAAGAGTAAGAACTTAACCACAGTAGACACCTGGACTTTGTTGAAGCTT  50
      |||||||||||||| ||||| ||||||| ||||| || |||||| |||| 
seq2  GAAAGAGTAAGAACCTAACC-CAGTAGA-ACCTGAACCTTGTTG-AGCT-  46

seq1  AAGAAATTGGTTGAGCACTCACAGTGCAAGTGCA-GCTAGGGCACGATTG  99
       ||||||    ||||||||||||||||||||||| |||||||||||| ||
seq2  -AGAAAT---GTGAGCACTCACAGTGCAAGTGCAGGCTAGGGCACGA-TG  91

seq1  CCCTCTACTGGCCAAGCTGAGTGTGGCACTGTCTCCTACAGCCAAACTGC  149
      ||||||||| | |||||||||||||||||||||| |||||||| ||||||
seq2  CCCTCTACT-GACAAGCTGAGTGTGGCACTGTCT-CTACAGCC-AACTGC  138

seq1  TGGGGCTTCCTTTGTTTGTGCCTGTTAGGTTTATGCTCTGTGTATACATA  199
      |||||||  |||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCT--CTTTGTTTGTGCCTGTTAGGTTTATGCTCTGTGTATACATA  186

seq1  TTACATTTATATGTATATTTTGAAGCCAGTAGCTGAAGAGCTATAGCACA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATTTATATGTATATTTTGAAGCCAGTAGCTGAAGAGCTATAGCACA  236

seq1  GAACATGTGCTCATTATAGTCCCTTTTAAAAATAGAAAAATTGCGTCTGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATGTGCTCATTATAGTCCCTTTTAAAAATAGAAAAATTGCGTCTGG  286

seq1  AGAGATAGCTCAGTGTTAAGAGCACTTGATGCCCTCACATACGACCTGAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATAGCTCAGTGTTAAGAGCACTTGATGCCCTCACATACGACCTGAA  336

seq1  TTCAGTTTCCAGCATACACATGATAGATCACAACTGTCTAAACCTCCAGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTTTCCAGCATACACATGATAGATCACAACTGTCTAAACCTCCAGT  386

seq1  TTCAGAATATCTGACACCTTATTCTGGCCTCCTCAGGCATGAATCATATA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAATATCTGACACCTTATTCTGGCCTCCTCAGGCATGAATCATATA  436

seq1  TGTGATGAACAGACATACATGCAGCCAAAACACTTATACACATGAAATAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATGAACAGACATACATGCAGCCAAAACACTTATACACATGAAATAA  486

seq1  ATCTAAAAACGTATAAATAGCAAATAAATATAAATAACAAATCAGGGGAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAAAACGTATAAATAGCAAATAAATATAAATAACAAATCAGGGGAC  536

seq1  TGGAGAGATGCATCATCAGTTAAAAGCACAGGCTGTTCCTTCCGAGGACT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAGATGCATCATCAGTTAAAAGCACAGGCTGTTCCTTCCGAGGACT  586

seq1  TAGGTTTGGTTTATCGCACCCACATGGTGGCTCACAACCATCTGTAACTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTTGGTTTATCGCACCCACATGGTGGCTCACAACCATCTGTAACTC  636

seq1  CAACTCCAAAGAATCTATTGTTAATCTACTTTAAAAGATTAATCTCATCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCCAAAGAATCTATTGTTAATCTACTTTAAAAGATTAATCTCATCT  686

seq1  TTCATTACAAATGTTTCAAGCTAACCTTCCAATGAAAAGCCATGGATACT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTACAAATGTTTCAAGCTAACCTTCCAATGAAAAGCCATGGATACT  736

seq1  AGTCCTTTAATCTGTGAGTCATATTGTTTTGTTCTTCAAGTGCTAAGGAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTTTAATCTGTGAGTCATATTGTTTTGTTCTTCAAGTGCTAAGGAT  786

seq1  TGAACCTATGGTGTCACGGTAACCTGGTCACCCACCACTCACTGCCAGCG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCTATGGTGTCACGGTAACCTGGTCACCCACCACTCACTGCCAGCG  836

seq1  GGCTAGACCCATGTCTCCAAACTTAGACTCTTCTACTGAAGTTACTTTAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAGACCCATGTCTCCAAACTTAGACTCTTCTACTGAAGTTACTTTAG  886

seq1  ATAATCTGAGCTCTTTCTCTATAGGAACCTGTTCTTGTTCCTCTTTTGTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCTGAGCTCTTTCTCTATAGGAACCTGTTCTTGTTCCTCTTTTGTT  936

seq1  AGACAGTTTGTCTCAGCTTATGTGGCATCACACATTTTTTGTATTCCAGT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGTTTGTCTCAGCTTATGTGGCATCACACATTTTTTGTATTCCAGT  986

seq1  TCCTTTTCAAATAACTTCATTACTTCTTACCCATTCCAAATCAAATGTAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTCAAATAACTTCATTACTTCTTACCCATTCCAAATCAAATGTAA  1036

seq1  ATTCCTCTGTGGTATTGTGTTAGGTGGGGTTCTCTAGAAGAGTAAACCTT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTCTGTGGTATTGTGTTAGGTGGGGTTCTCTAGAAGAGTAAACCTT  1086

seq1  ACAGCGTGTATGTGAATTGTTTATTAAAATGGCTTACAGACTATATAGTT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCGTGTATGTGAATTGTTTATTAAAATGGCTTACAGACTATATAGTT  1136

seq1  CAGCTAATCTACTAACAGAAATTCCAAGAATTC  1182
      |||||||||||||||||||||||||||||||||
seq2  CAGCTAATCTACTAACAGAAATTCCAAGAATTC  1169