BAC Information

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BAC

Clone NameB6Ng01-257O21
Chromosome4 (Build37)
Map Location 151,377,218 - 151,486,463
singlet/doubletdoublet
Overlap geneKlhl21, Zbtb48, Tas1r1, Nol9, EG666980, Plekhg5
Upstream genePer3, Vamp3, Camta1, LOC100041960, Dnajc11, Thap3, Phf13
Downstream geneTnfrsf25, Espn, LOC100043284, Hes2, Acot7, Gpr153, Hes3, Icmt, Rnf207, Rpl22, Chd5, Kcnab2, LOC100042028, Nphp4, LOC667039, Gm833
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257O21.bB6Ng01-257O21.g
ACCGA063502GA063503
length7161,087
definitionB6Ng01-257O21.b B6Ng01-257O21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(151,377,218 - 151,377,928)(151,485,384 - 151,486,463)
sequence
gaattccacacacagctgagaggtctaaatccgggcctttctattctcac
cacattcctggtctcagacgtggcacttgttcggttgatggcatcatgat
gagctgaagagagacatttacttcttgttgtatctgcatgattctctcac
ctgcatatacggatggatgtgtgtgtgtgtgtgtgtttgcctggtatccc
tggaggccaggagagtatgttggctcctctggggttggatttaccatcac
acaggtcctctgcaagaggaacaagtgcccttagttctgagccatctctc
cagcccctaaaatgttaataattaaaaaaacaagccagccaggcatggtg
gctcacgcctttaatcccagcacttgagaggcagagacaggcagatttct
gagttcgaggccagcctgatctacagagtgagttccaggacagtcaggac
tacaaagagaaaccctgtctcaaaaaaaacaaaaaacaaaaaaacaaaaa
acaaaacaaaacaaaaaaaaacaaacaggccaagggctagagagttggct
cagtggttaagagcacttgttcttgttgtaaaggacccaggtttgattcc
cagcacccacgtggaggctcaccacctcctcaagggccccgcacgtgtgg
gtgctcaaatacacatgaaggcaaaaattttctcacatttacataataaa
atttttatgggctgga
gaattcattcaggtagatgaggaggaaggaacctggtcacagaaaggccg
agttagtattggcctgcgcccatggtggccccatgaccaggagcaggggg
ccaaaattccttaccagggtcccgaagttcccggcacacaatcttgtcca
ccagtagcggtggcctgatgaccttcgtcctctctgctttcttcacggcc
ttggtcaccaagagtaggtcagtgaagaggaagcagtacacgtccatctg
tggtggggaagccggggtcacagtcagcacagggggatcccagggcaggc
acagacctttgtcgttttgttactaaagagttacttgcattttatttatt
tgcttaaaagtgttttgttttgtttttttaaagatttatttattttatgt
atgagagtacactgtagctatacatggttatgaaccttcatgtggttgct
gggaagtgaatttttaggaactctgctggctctggtcaactgcactcctc
tctctcagtccctgcttgctctggcccaaagatttattattatacatcaa
gtacactgtagctgacttcagacgcactaaaagagggcatcagatctcat
tatgggtggttgtgagctaccacatggttgctggaatttgaactcaggac
ctttggaagagcagtcagtgctcttacctgctgagccatctagccagccc
ttaaaagtgtttttagccttcatttttgtgggtgtggatgttttgcctgt
atgtatgtgttccatgtctggtgccatggagccagagttaccatggagac
gtggaactgaatccacggagtgcttgtaactactgagcaatctctctacc
tgctgcatgtcaactgagtgctgcttttttggtttgtatgtatgtattta
tggggcacacaggtaccaaactcagatcaacaggacttggtggcatgtgc
caccagagcccatggtccctgggagctcagtttttgttcaaataccttcc
ttttctatcatgaaaggaatttttggtgaactctacttatttttttaacc
aagttgaatgaataagtgtacaattacgttattttac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_151377218_151377928
seq2: B6Ng01-257O21.b_45_760

seq1  GAATTCCACACACAGCTGAGAGGTCTAAATCCGGGCCTTTCTATTCTCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACACACAGCTGAGAGGTCTAAATCCGGGCCTTTCTATTCTCAC  50

seq1  CACATTCCTGGTCTCAGACGTGGCACTTGTTCGGTTGATGGCATCATGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTCCTGGTCTCAGACGTGGCACTTGTTCGGTTGATGGCATCATGAT  100

seq1  GAGCTGAAGAGAGACATTTACTTCTTGTTGTATCTGCATGATTCTCTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGAAGAGAGACATTTACTTCTTGTTGTATCTGCATGATTCTCTCAC  150

seq1  CTGCATATACGGATGGATGTGTGTGTGTGTGTGTGTTTGCCTGGTATCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATATACGGATGGATGTGTGTGTGTGTGTGTGTTTGCCTGGTATCCC  200

seq1  TGGAGGCCAGGAGAGTATGTTGGCTCCTCTGGGGTTGGATTTACCATCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGCCAGGAGAGTATGTTGGCTCCTCTGGGGTTGGATTTACCATCAC  250

seq1  ACAGGTCCTCTGCAAGAGGAACAAGTGCCCTTAGTTCTGAGCCATCTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTCCTCTGCAAGAGGAACAAGTGCCCTTAGTTCTGAGCCATCTCTC  300

seq1  CAGCCCCTAAAATGTTAATAATTAAAAAAACAAGCCAGCCAGGCATGGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCCTAAAATGTTAATAATTAAAAAAACAAGCCAGCCAGGCATGGTG  350

seq1  GCTCACGCCTTTAATCCCAGCACTTGAGAGGCAGAGACAGGCAGATTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACGCCTTTAATCCCAGCACTTGAGAGGCAGAGACAGGCAGATTTCT  400

seq1  GAGTTCGAGGCCAGCCTGATCTACAGAGTGAGTTCCAGGACAGTCAGGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCGAGGCCAGCCTGATCTACAGAGTGAGTTCCAGGACAGTCAGGAC  450

seq1  TACAAAGAGAAACCCTGTCTCAAAAAAAACAAAAAACAAAAAAACAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAGAGAAACCCTGTCTCAAAAAAAACAAAAAACAAAAAAACAAAAA  500

seq1  ACAAAACAAAACAAAAAAAAACAAACAGGCCAAGGGCTAGAGAGTTGGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACAAAACAAAAAAAAACAAACAGGCCAAGGGCTAGAGAGTTGGCT  550

seq1  CAGTGGTTAAGAGCACTTGTTCTTGTTGCAAAGGACCCAGGTTTGATTCC  600
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CAGTGGTTAAGAGCACTTGTTCTTGTTGTAAAGGACCCAGGTTTGATTCC  600

seq1  CAGCACCCACGTGGAGGCTCACCACCTCCTCAAGGG-CCCGCACGTGT-G  648
      |||||||||||||||||||||||||||||||||||| ||||||||||| |
seq2  CAGCACCCACGTGGAGGCTCACCACCTCCTCAAGGGCCCCGCACGTGTGG  650

seq1  GTGCTCAAATACACATGAAGGCAAAA---CTCTCACACATAAGATAATAA  695
      ||||||||||||||||||||||||||    |||||||  | | |||||||
seq2  GTGCTCAAATACACATGAAGGCAAAAATTTTCTCACA-TTTACATAATAA  699

seq1  AA-TTTTAGGGGCTGGA  711
      || ||||| ||||||||
seq2  AATTTTTATGGGCTGGA  716

seq1: chr4_151485384_151486463
seq2: B6Ng01-257O21.g_67_1153 (reverse)

seq1  GTAAAAT-ACATA--TGTACACTTATTTAATACACTTTGTT-AAAAGATA  46
      ||||||| || ||  |||||||||||| | |  |||| ||| |||| |||
seq2  GTAAAATAACGTAATTGTACACTTATTCATTCAACTTGGTTAAAAAAATA  50

seq1  AGTAAGTTTCAC--AAAAATCCTTTCATGATAGGAAAGGAAGGTA-TTGA  93
      ||||   |||||  |||| |||||||||||||| ||||||||||| ||||
seq2  AGTAGAGTTCACCAAAAATTCCTTTCATGATAGAAAAGGAAGGTATTTGA  100

seq1  ACAAAAACTGAGCTCCCAGGGGCCATTGGGCTCTGGTGGCACATGCCACC  143
      ||||||||||||||||||||| ||| ||||||||||||||||||||||||
seq2  ACAAAAACTGAGCTCCCAGGGACCA-TGGGCTCTGGTGGCACATGCCACC  149

seq1  AAGTCTTGTTGATCTGAGTTTGGTACCTGTGTGCCCCATAAATACATACA  193
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCTGTTGATCTGAGTTTGGTACCTGTGTGCCCCATAAATACATACA  199

seq1  TACAAACCAAAAAAGCAGCACTCAGTTGACATGCAGCAGGTAGAGAGATT  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAACCAAAAAAGCAGCACTCAGTTGACATGCAGCAGGTAGAGAGATT  249

seq1  GCTCAGTAGTTACAAGCACTCCGTGGATTCAGTTCCACGTCTCCATGGTA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGTAGTTACAAGCACTCCGTGGATTCAGTTCCACGTCTCCATGGTA  299

seq1  ACTCTGGCTCCATGGCACCAGACATGGAACACATACATACAGGC-AAACA  342
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ACTCTGGCTCCATGGCACCAGACATGGAACACATACATACAGGCAAAACA  349

seq1  TCCACACCCACAAAAATGAAGGCTAAAAACACTTTTAAGGGCTGGCTAGA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACACCCACAAAAATGAAGGCTAAAAACACTTTTAAGGGCTGGCTAGA  399

seq1  TGGCTCAGCAGGTAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCAGCAGGTAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCA  449

seq1  AATTCCAGCAACCATGTGGTAGCTCACAACCACCCATAATGAGATCTGAT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCAGCAACCATGTGGTAGCTCACAACCACCCATAATGAGATCTGAT  499

seq1  GCCCTCTTTTAGTGCGTCTGAAGTCAGCTACAGTGTACTTGATGTATAAT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCTTTTAGTGCGTCTGAAGTCAGCTACAGTGTACTTGATGTATAAT  549

seq1  AATAAATCTTTGGGCCAGAGCAAGCAGGGACTGAGAGAGAGGAGTGCAGT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATCTTTGGGCCAGAGCAAGCAGGGACTGAGAGAGAGGAGTGCAGT  599

seq1  TGACCAGAGCCAGCAGAGTTCCTAAAAATTCACTTCCCAGCAACCACATG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAGAGCCAGCAGAGTTCCTAAAAATTCACTTCCCAGCAACCACATG  649

seq1  AAGGTTCATAACCATGTATAGCTACAGTGTACTCTCATACATAAAATAAA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTCATAACCATGTATAGCTACAGTGTACTCTCATACATAAAATAAA  699

seq1  TAAATCTTTAAAAAAACAAAACAAAACACTTTTAAGCAAATAAATAAAAT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCTTTAAAAAAACAAAACAAAACACTTTTAAGCAAATAAATAAAAT  749

seq1  GCAAGTAACTCTTTAGTAACAAAACGACAAAGGTCTGTGCCTGCCCTGGG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTAACTCTTTAGTAACAAAACGACAAAGGTCTGTGCCTGCCCTGGG  799

seq1  ATCCCCCTGTGCTGACTGTGACCCCGGCTTCCCCACCACAGATGGACGTG  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCCTGTGCTGACTGTGACCCCGGCTTCCCCACCACAGATGGACGTG  849

seq1  TACTGCTTCCTCTTCACTGACCTACTCTTGGTGACCAAGGCCGTGAAGAA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCTTCCTCTTCACTGACCTACTCTTGGTGACCAAGGCCGTGAAGAA  899

seq1  AGCAGAGAGGACGAAGGTCATCAGGCCACCGCTACTGGTGGACAAGATTG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGAGGACGAAGGTCATCAGGCCACCGCTACTGGTGGACAAGATTG  949

seq1  TGTGCCGGGAACTTCGGGACCCTGGTAAGGAATTTTGGCCCCCTGCTCCT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCGGGAACTTCGGGACCCTGGTAAGGAATTTTGGCCCCCTGCTCCT  999

seq1  GGTCATGGGGCCACCATGGGCGCAGGCCAATACTAACTCGGCCTTTCTGT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATGGGGCCACCATGGGCGCAGGCCAATACTAACTCGGCCTTTCTGT  1049

seq1  GACCAGGTTCCTTCCTCCTCATCTACCTGAATGAATTC  1080
      ||||||||||||||||||||||||||||||||||||||
seq2  GACCAGGTTCCTTCCTCCTCATCTACCTGAATGAATTC  1087