BAC Information

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BAC

Clone NameB6Ng01-258G02
Chromosome4 (Build37)4 (Build37)
Map Location 145,025,736 - 145,026,261146,902,338 - 146,903,061
singlet/doubletsingletsinglet
Overlap genenone
Upstream gene1700012P22Rik, Aadacl3, 9430007A20Rik, LOC100041232, LOC666194, LOC627085, LOC666215, LOC435815, Gm436, LOC546849, Gm438, LOC666242, LOC676844, Dhrs3, Vps13d, Tnfrsf1b, Tnfrsf8, LOC666282
Downstream gene9230115A19Rik, LOC195576, LOC622846, LOC666314, LOC545701, OTTMUSG00000010965, LOC666334, LOC545703, LOC384081, LOC100041379, LOC666349, LOC666351, LOC545704, 1700029I01Rik, LOC236069, LOC384084, LOC666386, LOC666390, LOC100041433, LOC433790, LOC433791, Rex2, LOC100043012, LOC100041461, LOC630093
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258G02.bB6Ng01-258G02.g
ACCGA063832GA063833
length1,002987
definitionB6Ng01-258G02.b B6Ng01-258G02.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(145,025,736 - 145,026,261)(146,902,338 - 146,903,061)
sequence
gaattcttctttccttaggcaaaccttatactattgccaaaaggataata
ttatgtaaaaggcaaagaagagaaacgctagaaagacatcatacaaagtt
ggtgtacatctacaccccaaacagataaacagaagcaaatatatggccaa
agctttccagtgaaaaacagacagcatattcaataaatggtgctgattca
agtgtcagtccacatgtagaagaatgccaattgattcactcctaccgcct
tgtacaatgctcaagtcaatgtggatcaagaacctctacataaaaccaga
tacactgaatctaatagaagagaaaggggggaaaagccttcaacacatct
gcaaagggtaaaatttcctgaacagagcagaaatggctcaagttcgaagg
tcaactatggacaaatgggatctcataaaattaaaaagcctctgtaaggc
aaaggacactgtcaataggaccaaacagcaacctacaaaatggtaaagga
tcttaaccattcctctgtctgacagagggctaatgtccactatatagaaa
gaactcaagaagttagactctagagaaccaaataaccctattaaaaatag
ggtacgtgggggctggtgagatggctcagcggttaagagtactgactgct
cttccaaaggtcctgagttcaaatctcagcaaccacattgtggctcacaa
caatccgtaacgaaatctgatgccatcttctggagtgtctgaagacagcg
acagtgcacttacatataataaataaatattaaaaacaaaaaaaaatagg
gtacacagccatggaaggagttacagagacaaagtttggagctgagactg
aaggaaagggccatccagagactgccctacccagggatccatcccataaa
caacccccaaaaccagacaccatttcaactgtcaacaagattttgctgac
aggacactgacatacctgtctcctctgaagctataccagttcctggcaaa
ta
gaattctttagatactcttcatttcacggtgcagatagtgtgtgcatatt
cacatgtcatgtttccattgttctgttttccatgtaaaaaaatgtctccc
tattcttcatgtgtatctttttgattgaagtcatttattcacatgatatc
actgcagcccttcctctcttcctagtaacccctcacatagatctcccctc
actccgcttcaaagcagaagtattcatctgtcggatgtagaggtagtgca
gttcttttcctagtctataggaatcctgaagatggtgacttttgacttac
agtagcacttagcattcatgagtttccatttattaattcttgactttatc
atcagaaacactggtgttctgtttaggaagttgtttcctgatccaacaag
ttcaaagctactctccactttttgttccattagattaagtatgtctggat
ttatactgaggtctttgcttcacttggacttgagtattatgcagggtgtt
aaatatggatctatatgcttttttctacatgatgacatccagttagacca
gcatcattcacaaagatgttctcccctttccgttgtatagttttagcttc
tttgccaaaatttaagtgtctgtaggtgtgtgggtctatttttgggtctc
ctattgaattccattaatccacctacttatttctataccagtaccataca
aatttttattactatttttctgccatacagctttaagttacagaaattga
tagctccagaatttcttttttgttgttcaagaatattttatctatcctgt
gggggtttttttgttttttgtttttttttttgtttttgttttgtttttgt
tttgtttttgctgtctgatacaacgttgacaatatttctttcaagatctg
tgaagattgtgctaaaattttgatgagaattgtactgaatgtctatattg
ctttttgattaaaatggacatattcattatgttaatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_145025736_145026261
seq2: B6Ng01-258G02.b_43_568 (reverse)

seq1  TCTGTCAGACAGAGGAATGGTTAAGATCTTTTACCATTTTGTGGGTTGCT  50
      |||||||||||||||||||||||||||| ||||||||||||| |||||||
seq2  TCTGTCAGACAGAGGAATGGTTAAGATCCTTTACCATTTTGTAGGTTGCT  50

seq1  GTTTTGTCCTATTGACAGTGTCCTTTGCCTTACAGAGGCTTTTTAATTTT  100
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGTCCTATTGACAGTGTCCTTTGCCTTACAGAGGCTTTTTAATTTT  100

seq1  ATGAGATCCCATTTGTCCATAGTTGACCTTCGAACTTGAGCCATTTCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ATGAGATCCCATTTGTCCATAGTTGACCTTCGAACTTGAGCCATTTCTGC  150

seq1  TTTGTTCAGGAAATTTTACCCTTTGCAGATGTGTTGAAGGCTTTTCCCCC  200
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTCAGGAAATTTTACCCTTTGCAGATGTGTTGAAGGCTTTTCCCCC  200

seq1  CTTTCTCTTCTAGTAGATTCAGTGTATCTGGTTTTATGTGGAGGTTCTTG  250
      |||||||||||| |||||||||||||||||||||||||| ||||||||||
seq2  CTTTCTCTTCTATTAGATTCAGTGTATCTGGTTTTATGTAGAGGTTCTTG  250

seq1  ATCCACGTTGACTTGAGCATTGTACAAGGCGGTAGGAGTGAATCAATTGG  300
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACATTGACTTGAGCATTGTACAAGGCGGTAGGAGTGAATCAATTGG  300

seq1  CATTCTTCTACATGTGGACTGACACTTGAACCAGAACCATTTATTGAATA  350
      |||||||||||||||||||||||||||||| ||| |||||||||||||||
seq2  CATTCTTCTACATGTGGACTGACACTTGAATCAGCACCATTTATTGAATA  350

seq1  TGGTGTCTGTTTTTCACTGGAAGGCTTTGGCCATATATTTGCTTCTGTTT  400
      || ||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TGCTGTCTGTTTTTCACTGGAAAGCTTTGGCCATATATTTGCTTCTGTTT  400

seq1  ATCTGTTTGGGGTGTAGATGTACACCAACTTTGTGTGATGTCTTTCTAGC  450
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ATCTGTTTGGGGTGTAGATGTACACCAACTTTGTATGATGTCTTTCTAGC  450

seq1  ATTTCTCTTCTTTGCCTTTTACATAATATTATCCTTTTGGCAATAGTATA  500
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTCTTCTTTGCCTTTTACATAATATTATCCTTTTGGCAATAGTATA  500

seq1  AGGTTTGCCTAAGGAAAGAAGAATTC  526
      ||||||||||||||||||||||||||
seq2  AGGTTTGCCTAAGGAAAGAAGAATTC  526

seq1: chr4_146902338_146903061
seq2: B6Ng01-258G02.g_65_788

seq1  GAATTCTTTAGATACTCTTCATTTCACGGTGCAGATAGTTTGTGCATATT  50
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GAATTCTTTAGATACTCTTCATTTCACGGTGCAGATAGTGTGTGCATATT  50

seq1  CACATGTCATGTTTCCATTGTTCTGTTTTCCATGTAAAAAAATGTCTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||| | 
seq2  CACATGTCATGTTTCCATTGTTCTGTTTTCCATGTAAAAAAATGTCTCCC  100

seq1  TATTCTTCATGTGTATCTTTTTGATTGAAGTCATTTATTCACATGATATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTCATGTGTATCTTTTTGATTGAAGTCATTTATTCACATGATATC  150

seq1  ACTGCAGCCCTTCCTCTCTTCCTAGTAACCCCTCACATAAATCTCCCCTC  200
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ACTGCAGCCCTTCCTCTCTTCCTAGTAACCCCTCACATAGATCTCCCCTC  200

seq1  ACTCCGCTTCGAAGCAGAAGTATTCATCTGTCGGATGTAGAGGTAGTGCA  250
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ACTCCGCTTCAAAGCAGAAGTATTCATCTGTCGGATGTAGAGGTAGTGCA  250

seq1  GTTCTTTTCCTAGTCTATAGGGATCCTGAAGATGGTGACTTTTGACTTAC  300
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GTTCTTTTCCTAGTCTATAGGAATCCTGAAGATGGTGACTTTTGACTTAC  300

seq1  AGAAGCACTTAGCATTTATGAGTTTCCATTTATTAATTCTTGACTTTATC  350
      || ||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AGTAGCACTTAGCATTCATGAGTTTCCATTTATTAATTCTTGACTTTATC  350

seq1  ATCAGAGACACTGGTGTTCTGTTTAGGAAGTTGTTTCCTGATCTAACAAG  400
      |||||| |||||||||||||||||||||||||||||||||||| ||||||
seq2  ATCAGAAACACTGGTGTTCTGTTTAGGAAGTTGTTTCCTGATCCAACAAG  400

seq1  TTCAAAGCTACTCTCCACTTTTTGTTCCATTAGATTAAGTATGTCTGGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGCTACTCTCCACTTTTTGTTCCATTAGATTAAGTATGTCTGGAT  450

seq1  TTATATTGAGGTCTTTGCTTCACTTGGACTTGAGTATTATGCAGGGTGTT  500
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACTGAGGTCTTTGCTTCACTTGGACTTGAGTATTATGCAGGGTGTT  500

seq1  AAATATGGATCTATATGCTTTTTTCTACCTGATGACATCCAGTTAGACCA  550
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AAATATGGATCTATATGCTTTTTTCTACATGATGACATCCAGTTAGACCA  550

seq1  GCATCATTCATAAAGATGTTCTCTCCTTTCCGTTGTATAGTTTTAGCTTC  600
      |||||||||| |||||||||||| ||||||||||||||||||||||||||
seq2  GCATCATTCACAAAGATGTTCTCCCCTTTCCGTTGTATAGTTTTAGCTTC  600

seq1  TTTGCCAAAATTTAAGTGTCTGTAGGTGTGTGGGTCTATGTTTGGGTCTC  650
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TTTGCCAAAATTTAAGTGTCTGTAGGTGTGTGGGTCTATTTTTGGGTCTC  650

seq1  CTATTGAATTCCATTAATCCACCTACTTCTTTCTATACCAGTACCATACA  700
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CTATTGAATTCCATTAATCCACCTACTTATTTCTATACCAGTACCATACA  700

seq1  AATTTTTATTACTATTTTTCTGCC  724
      ||||||||||||||||||||||||
seq2  AATTTTTATTACTATTTTTCTGCC  724