BAC Information

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BAC

Clone NameB6Ng01-260I13
Chromosome4 (Build37)
Map Location 134,001,018 - 134,001,278
singlet/doubletsinglet
Overlap genenone
Upstream gene4732473B16Rik, 2300002D11Rik, 1810019J16Rik, Nudc, Nr0b2, Gpatch3, Atpbd1b, Sfn, Zdhhc18, LOC545683, Pigv, Arid1a, Rps6ka1, 4930429E23Rik, LOC100042151, Hmgn2, Dhdds, Lin28, Aim1l, Cd52, Ubxd5, Sh3bgrl3, Ccdc21, EG665186, Catsper4, Cnksr1, Zfp593, Grrp1, Pdik1l, Trim63, Slc30a2, Extl1, LOC434166, Pafah2
Downstream geneStmn1, Paqr7, 2610002D18Rik, 2410166I05Rik, Sepn1, Man1c1, Ldlrap1, Tmem57, Rhd, Tmem50a, D4Wsu53e, Syf2, Runx3, Clic4, LOC676072, Srrm1, A330049M08Rik, LOC665287, Dscr1l2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-260I13.bB6Ng01-260I13.g
ACCGA065432GA065433
length2811,194
definitionB6Ng01-260I13.b B6Ng01-260I13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
atttctctctcttttgctaaataccatttttatcttggctcagtccgtga
atctttagatgatagcatctgctttcagcagtccatgcctgggcctaaag
gaacaagtgataaaggacccctccctaactccaaatgacctgtctgtctt
cgggggaagagtctcccacacacagagcagccgtcctccaagctgccttg
atcctccctctcctctcctctcctctcctctccactcctctcctctcctc
tccactcttcttctctctgcttctctcctct
gaattcttacgcatgctaccccagccactgtgaattcgtgtgtgcaatgg
ccctgtcatgtctggcaagttgttttgctatggacatctgctctgtctgg
ctcttataggatttccagctcttcccaaatgatccctgacccttgggtga
ggggtatcgacatcttggctctctgtattaattgccatctcctgtaaata
aataaataaataaacaaataaataaataaataaatgaataaatgaataaa
taagcaagcaagcaagcaggcaggcaagcctctctgacgaggcctgagag
atgtgtgaatctatggatacaaagataagtacttaggaggccgttaaagc
tgttcacttaacaaggtactagtactaggttctcccttagggctctggcc
tagccagccacagattgtcggcccagtgaatagtactgggcttgagtcca
gctttgtggcgcaggattcaaatccaaccagaaagtgtttggttactccc
ataagggtaatgccactattatgccaccgggtctctattgccaggcagtt
gtggctgtagcacacagcgtgcagaagtgattgatttccttcgctgatag
tgtgcatggcacctcccaggaccatgaaagctacacagtaggggtgaagc
ttccaaggcggtgccagcttgatcgcaccatattcgagaattatagaatg
caaggttgtggggtcttcagcaatggagtcttaccagcaagtctgcaagg
tagcccatagcaatagcctctaacatttgggggagtctaaaggaccccac
tgaccagcaactttttatgtgatagacagtgtctggctttagaagtcatt
atgtagctcaggctagccttggaattcattgtgtagcccaggttggcctt
gagctcccagcaaccctcctgctactgcctcctgagtgcttgagttgtag
gcatgcaccacacagcccgactggcttggttttgttttgttgttaacttt
aggtggtctctgggttatcttcaagcacaataaggacaggtctgtgtcac
tctgtggatggatgtctggtgatgtccctatgctatgttctagcccgcct
gcagactggggactggatattcaatttctggtcaaagacatgctatctcc
tgcttagccagaactggttgcgctcggatatttttctcaccacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_134001018_134001278
seq2: B6Ng01-260I13.b_51_331

seq1  ATTTCTCTCTCTTTTGCTAAATACCATTTTTATCTTGGCTCAGTCCGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCTCTCTTTTGCTAAATACCATTTTTATCTTGGCTCAGTCCGTGA  50

seq1  ATCTTTAGATGATAGCATCTGCTTTCAGCAGTCCATGCCTGGGCCTAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTAGATGATAGCATCTGCTTTCAGCAGTCCATGCCTGGGCCTAAAG  100

seq1  GAACAAGTGATAAAGGACCCCTCCCTAACTCCAAATGACCTGTCTGTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAGTGATAAAGGACCCCTCCCTAACTCCAAATGACCTGTCTGTCTT  150

seq1  CGGGGGAAGAGTCTCCCACACACAGAGCAGCCGTCCTCCAAGCTGCCTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGGAAGAGTCTCCCACACACAGAGCAGCCGTCCTCCAAGCTGCCTTG  200

seq1  ATCCTCCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTC  250
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ATCCTCCCTCTCCTCTCCTCTCCTCTCCTCTCCACTCCTCTCCTCTCCTC  250

seq1  TCCTCTCCTCT--------------------  261
      ||| ||| |||                    
seq2  TCCACTCTTCTTCTCTCTGCTTCTCTCCTCT  281