BAC Information

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BAC

Clone NameB6Ng01-262B14
Chromosome4 (Build37)
Map Location 155,086,604 - 155,203,989
singlet/doubletdoublet
Overlap geneSsu72, EG381582, Atad3a, Vwa1, A230069A22Rik, E230028L10Rik, Mrpl20, Ccnl2
Upstream geneB230396O12Rik, Mmel1, 2810405K02Rik, Tnfrsf14, Hes5, Pank4, LOC100043358, Plch2, Pex10, Rer1, Morn1, Ski, 2610002J02Rik, Prkcz, Gabrd, 2010015L04Rik, Tmem52, Gnb1, Nadk, A530082C11Rik, Cdc2l1, Mmp23, Mib2, B930041F14Rik
Downstream geneAurkaip1, Mxra8, Dvl1, Tas1r3, BC002216, Cpsf3l, Pusl1, Centb5, Ube2j2, C1qdc2, B3galt6, Sdf4, LOC100043436, Tnfrsf4, Tnfrsf18, Ttll10, 9430015G10Rik, EG667357, Agrn, LOC100038882, AW011738, LOC677185, 2310042D19Rik, Plekhn1, Klhl17, LOC100042378
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-262B14.bB6Ng01-262B14.g
ACCGA066604GA066605
length857347
definitionB6Ng01-262B14.b B6Ng01-262B14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(155,203,118 - 155,203,989)(155,086,604 - 155,086,950)
sequence
gaattctaggacagccagggctacacagagaaaccctgtctcaaaaaacc
aaaagaccccctgtatctcaaacaggctccaggccaaaacagaacatgcc
caaccagggcagggtagctgcttggccatggtggcaataaaacacagaca
catagccatgacaccatgacattgtattgctactgtaaactaaccttgcc
aaggcagatctggaattgcaaaggttaatccttcataaaaacctaagaaa
aaaagcactgctggggctgaagagatggcttggtggttaagagtacttcc
tattcttccgtgggattttcgtttgttcccaatcagaaagaacccgaaag
aaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaa
agaaagaaagaaaggaaggaaggaaggaaggaaggaaggaaggaaggaag
gaaggaaggaaggaaggaaggaaggaaggaaggaagaaagaaaagaaaga
aagaaagaaagatcactcactggtagaagatttggggggagagtctgtgt
aaattgttttctttagagtataaagatgaatttaaaagtgtgaatggcca
gaggtggccccaccctggggcctgcctgttacagcctaggttgaggaacc
ctagaattgagccacagaagccaaatgctgactggtttgtgccagtcagg
gtagctgcttaacttaagcctgatgcttaacttaaacttgagcctgcgcg
tccgtctcatcctaacgctagcacagctgtgaagcttgttgaacaccgac
catttcttttttttttttttttaaagatttatttattacatataaagtta
cactgta
caggtcagcttgggttacatactgagaccctgtctgaaaacaatagcaaa
aatacagaaaagccgtaccagagtgatacttttataaaatcataacgatt
gagctaggcatggtgataccagcctttaatctcagagttaagaaatcaaa
ggctgttagatttctgtgagctcaaggccagcctggcctattaaagagtt
tcaagactgcagggcgtggtggcacaacgcttttaatcctagcacttggg
aggcaaaggcaggtggatttctgagttcgaggccagcaaagactacatag
tgagatcctgtttcagaaagccaaaagtgggggggggggcggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_155203118_155203989
seq2: B6Ng01-262B14.b_45_901 (reverse)

seq1  TACAGTGTA--CTTATATGTAATAAATAAATCTTT--AAAAAAAAAAAAA  46
      |||||||||   |||||||||||||||||||||||  |||||||||||||
seq2  TACAGTGTAACTTTATATGTAATAAATAAATCTTTAAAAAAAAAAAAAAA  50

seq1  AGAAATGGTCGGTGTTCAACAAGCTTCACAGCTGTGCTAGCGTTAGGATG  96
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGGTCGGTGTTCAACAAGCTTCACAGCTGTGCTAGCGTTAGGATG  100

seq1  AGACGGACGCGCAGGCTCAAGTTTAAGTTAAGCATCAGGCTTAAGTTAAG  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGGACGCGCAGGCTCAAGTTTAAGTTAAGCATCAGGCTTAAGTTAAG  150

seq1  CAGCTACCCTGACTGGCACAAACCAGTCAGCATTTGGCTTCTGTGGCTCA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTACCCTGACTGGCACAAACCAGTCAGCATTTGGCTTCTGTGGCTCA  200

seq1  ATTCTAGGGTTCCTCAACCTAGGCTGTAACAGGCAGGCCCCAGGGTGGGG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAGGGTTCCTCAACCTAGGCTGTAACAGGCAGGCCCCAGGGTGGGG  250

seq1  CCACCTCTGGCCATTCACACTTTTAAATTCATCTTTATACTCTAAAGAAA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTCTGGCCATTCACACTTTTAAATTCATCTTTATACTCTAAAGAAA  300

seq1  ACAATTTACACAGACTCTCCCCCCAAATCTTCTACCAGTGAGTGATCTTT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTTACACAGACTCTCCCCCCAAATCTTCTACCAGTGAGTGATCTTT  350

seq1  CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTCCT  396
      ||||||||||||||           |||||||        ||||||||||
seq2  CTTTCTTTCTTTCT-----------TTTCTTT--------CTTCCTTCCT  381

seq1  TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC  431

seq1  CTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT  481

seq1  TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCGGGTTCTTTCTGATTGGGA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCGGGTTCTTTCTGATTGGGA  531

seq1  ACAAACGAAAATCCCACGGAAGAATAGGAAGTACTCTTAACCACCAAGCC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACGAAAATCCCACGGAAGAATAGGAAGTACTCTTAACCACCAAGCC  581

seq1  ATCTCTTCAGCCCCAGCAGTGCTTTTTTTCTTAGGTTTTTATGAAGGATT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTTCAGCCCCAGCAGTGCTTTTTTTCTTAGGTTTTTATGAAGGATT  631

seq1  AACCTTTGCAATTCCAGATCTGCCTTGGCAAGGTTAGTTTACAGTAGCAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTTGCAATTCCAGATCTGCCTTGGCAAGGTTAGTTTACAGTAGCAA  681

seq1  TACAATGTCATGGTGTCATGGCTATGTGTCTGTGTTTTATTGCCACCATG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATGTCATGGTGTCATGGCTATGTGTCTGTGTTTTATTGCCACCATG  731

seq1  GCCAAGCAGCTACCCTGCCCTGGTTGGGCATGTTCTGTTTTGGCCTGGAG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGCAGCTACCCTGCCCTGGTTGGGCATGTTCTGTTTTGGCCTGGAG  781

seq1  CCTGTTTGAGATACAGGGGGTCTTTTGGTTTTTTGAGACAGGGTTTCTCT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTTGAGATACAGGGGGTCTTTTGGTTTTTTGAGACAGGGTTTCTCT  831

seq1  GTGTAGCCCTGGCTGTCCTAGAATTC  872
      ||||||||||||||||||||||||||
seq2  GTGTAGCCCTGGCTGTCCTAGAATTC  857

seq1: chr4_155086604_155086950
seq2: B6Ng01-262B14.g_72_418

seq1  CAGGTCAGCTTGGGTTACATACTGAGACCCTGTCTGAAAACAATAGCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCAGCTTGGGTTACATACTGAGACCCTGTCTGAAAACAATAGCAAA  50

seq1  AATACAGAAAAGCCGTACCAGAGTGATACTTTTATAAAATCATAACGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAGAAAAGCCGTACCAGAGTGATACTTTTATAAAATCATAACGATT  100

seq1  GAGCTAGGCATGGTGATACCAGCCTTTAATCTCAGAGTTAAGAAATCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTAGGCATGGTGATACCAGCCTTTAATCTCAGAGTTAAGAAATCAAA  150

seq1  GGCTGTTAGATTTCTGTGAGCTCAAGGCCAGCCTGGCCTATTAAAGAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTTAGATTTCTGTGAGCTCAAGGCCAGCCTGGCCTATTAAAGAGTT  200

seq1  TCAAGACTGCAGGGCGTGGTGGCACAACGCTTTTAATCCTAGCACTTGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGACTGCAGGGCGTGGTGGCACAACGCTTTTAATCCTAGCACTTGGG  250

seq1  AGGCAAAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCAAAGACTACATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCAAAGACTACATAG  300

seq1  TGAGATCCTGTTTCAGAAAGCCAAAAGTGGGGGGGGGGGCGGGGGGG  347
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATCCTGTTTCAGAAAGCCAAAAGTGGGGGGGGGGGCGGGGGGG  347