BAC Information

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BAC

Clone NameB6Ng01-263D18
Chromosome4 (Build37)
Map Location 54,543,929 - 54,545,012
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc44a1, Fsd1l, LOC666483, Fcmd, Tal2, LOC435784, Tmem38b, LOC670124, LOC100041280
Downstream geneLOC666901, LOC100041303, LOC384018, EG666920, Zfp462, LOC670211, Rad23b, LOC666953, LOC100041348, Klf4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-263D18.bB6Ng01-263D18.g
ACCGA067454GA067455
length1,2111,094
definitionB6Ng01-263D18.b B6Ng01-263D18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttgtttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctctctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgat
ctgttcaggaaattttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tacatttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccatttgttgaaaat
tctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacagttgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatattgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagttcttatcata
cagatctttcacttccttagttagagtcacgccgagatatttttatatta
ttgtgactattgagaaggtgttgtttccctaattctttctcagcctgttt
atctttgtgtagagaaggccatgacttgttgagttatttttatatccagc
tactcaccgaaggctgtttatcatgtttagggagttctctggtggcactt
ttaggtccactatattcctatcaattcatctgcaaaaagtgcaatctgga
cttcctcgtttcccaagttggatccctgaattctccttttttgttggcgt
cgcagatgctg
gaattcatgtctggaactataaacctgatcttagctggggcaatcatagg
cttggtgctactgattttattttgctaaatgggcatgaagcgcctgtcaa
atcccttctaaataactgtttgtgcccagagaatcgtgctgctgtaagct
gtggtcagagaagcttctgtctgcagtggtcagcagtgactaaagagaca
catcactggtcaaagtacagagaataaaagactaattgagtacgaagcca
taatggaacatctgtaacacctcctccaaagctcagagaactcaaggaag
aggaaggggttgggactctgtgtgaaacactggatgtgacagatttgttg
cattcttgaactcacagtagctacagttccctgcataagatcatcacgag
attggactaacctagtcttggacatgaaaagaggagaatcccacaggagc
ctactgctctgtgttcataaccatcctctaagccaagtgttcagcatctt
ggggagttcagctatggcatcatgtgaatggactgtccctgctaggtctg
ttcgcgacttgaatccccttatgaaggcaggggaggctggctgcttgcaa
ctttgtcataatcgcacatggtctctggaagaggctaatgtatgaaggta
tgggaagactaagacaggaaagctccatttatgcagatatgagaaagtta
tcattcctgatgagtagactttgagttccagtgatgctttttggggggat
gagcaccctgtgtgctcagagggaattttgatgaagtcatgccttggttt
gttgttgggaccttgtgaggagttgacattgtttatgtctctttctgata
aggaatttgaacatcaccctttctgaggatgtgtgaacagataatgcttg
atggagaaagaaagagaacttctccagtggtgtctgctgggtaaaggggt
gcatgctcttgttatcagcgcctgcccacgttcctctaaatgatcctaac
ctcaccatatcaatacataccaaaagaaggaccatgaaaagtaaaagggg
gtcttagctggaaagaagggaaaggaatgaatgggggaagtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_54543929_54545012
seq2: B6Ng01-263D18.g_67_1160

seq1  GAATTCATGTCTGGAACTATAAACCTGATCTTAGCTGGGGCAATCATAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTCTGGAACTATAAACCTGATCTTAGCTGGGGCAATCATAGG  50

seq1  CTTGGTGCTACTGATTTTATTTTGCTAAATGGGCATGAAGCGCCTGTCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTGCTACTGATTTTATTTTGCTAAATGGGCATGAAGCGCCTGTCAA  100

seq1  ATCCCTTCTAAATAACTGTTTGTGCCCAGAGAATCGTGCTGCTGTAAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTTCTAAATAACTGTTTGTGCCCAGAGAATCGTGCTGCTGTAAGCT  150

seq1  GTGGTCAGAGAAGCTTCTGTCTGCAGTGGTCAGCAGTGACTAAAGAGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCAGAGAAGCTTCTGTCTGCAGTGGTCAGCAGTGACTAAAGAGACA  200

seq1  CATCACTGGTCAAAGTACAGAGAATAAAAGACTAATTGAGTACGAAGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACTGGTCAAAGTACAGAGAATAAAAGACTAATTGAGTACGAAGCCA  250

seq1  TAATGGAACATCTGTAACACCTCCTCCAAAGCTCAGAGAACTCAAGGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGAACATCTGTAACACCTCCTCCAAAGCTCAGAGAACTCAAGGAAG  300

seq1  AGGAAGGGGTTGGGACTCTGTGTGAAACACTGGATGTGACAGATTTGTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGGGTTGGGACTCTGTGTGAAACACTGGATGTGACAGATTTGTTG  350

seq1  CATTCTTGAACTCACAGTAGCTACAGTTCCCTGCATAAGATCATCACGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTGAACTCACAGTAGCTACAGTTCCCTGCATAAGATCATCACGAG  400

seq1  ATTGGACTAACCTAGTCTTGGACATGAAAAGAGGAGAATCCCACAGGAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGACTAACCTAGTCTTGGACATGAAAAGAGGAGAATCCCACAGGAGC  450

seq1  CTACTGCTCTGTGTTCATAACCATCCTCTAAGCCAAGTGTTCAGCATCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGCTCTGTGTTCATAACCATCCTCTAAGCCAAGTGTTCAGCATCTT  500

seq1  GGGGAGTTCAGCTATGGCATCATGTGAATGGACTGTCCCTGCTAGGTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGTTCAGCTATGGCATCATGTGAATGGACTGTCCCTGCTAGGTCTG  550

seq1  TTCGCGACTTGAATCCCCTTATGAAGGCAGGGGAGGCTGGCTGCTTGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGCGACTTGAATCCCCTTATGAAGGCAGGGGAGGCTGGCTGCTTGCAA  600

seq1  CTTTGTCATAATCGCACATGGTCTCTGGAAGAGGCTAATGTATGAAGGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTCATAATCGCACATGGTCTCTGGAAGAGGCTAATGTATGAAGGTA  650

seq1  TGGGAAGACTAAGACAGGAAAGCTCCATTTATGCAGATATGAGAAAGTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGACTAAGACAGGAAAGCTCCATTTATGCAGATATGAGAAAGTTA  700

seq1  TCATTCCTGATGAGTAGACTTTGAGTTCCAGTGATGCTTTTTGGGGGGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCCTGATGAGTAGACTTTGAGTTCCAGTGATGCTTTTTGGGGGGAT  750

seq1  GAGCACCCTGTGTGCTCAGAGGGAATTTTGATGAAGTCATGCCTTGGTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACCCTGTGTGCTCAGAGGGAATTTTGATGAAGTCATGCCTTGGTTT  800

seq1  GTTGTTGGGACCTTGTGAGGAGTTGACATTGTTTATGTCTCTTTCTGATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTGGGACCTTGTGAGGAGTTGACATTGTTTATGTCTCTTTCTGATA  850

seq1  AGGAATTTGAACATCACCCTTTCTGAGGATGTGTGAACAGATAATGCTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATTTGAACATCACCCTTTCTGAGGATGTGTGAACAGATAATGCTTG  900

seq1  ATGGAGAAAGAAAGAGAACTTCTCCAGTGGTGTCTGCTGG--TAAGGGGT  948
      ||||||||||||||||||||||||||||||||||||||||   |||||||
seq2  ATGGAGAAAGAAAGAGAACTTCTCCAGTGGTGTCTGCTGGGTAAAGGGGT  950

seq1  GCATGCTCTTGTTATCAGGCGCCTGCCCACGTTCCTCTAAATGATCCTAA  998
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GCATGCTCTTGTTATCA-GCGCCTGCCCACGTTCCTCTAAATGATCCTAA  999

seq1  CCTCACCATATC-ATACATACCAAA--GAGGACCATGAAAAGTAAAAGGG  1045
      |||||||||||| ||||||||||||   ||||||||||||||||||||||
seq2  CCTCACCATATCAATACATACCAAAAGAAGGACCATGAAAAGTAAAAGGG  1049

seq1  GGTC-TAGCTGGAAAGA--GGGAAGGGATGAATGGG---AGTGGG  1084
      |||| ||||||||||||  || |||| |||||||||   ||||||
seq2  GGTCTTAGCTGGAAAGAAGGGAAAGGAATGAATGGGGGAAGTGGG  1094