BAC Information

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BAC

Clone NameB6Ng01-264P05
Chromosome4 (Build37)
Map Location 22,123,170 - 22,124,334
singlet/doubletsinglet
Overlap genenone
Upstream genePrdm13, Ccnc, 2610029I01Rik, Usp45, 4930528A17Rik, 5730406M06Rik, Coq3, 6230409E13Rik
Downstream geneLOC100040379, Fbxl4, Pou3f2, LOC664911, 1700025O08Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-264P05.bB6Ng01-264P05.g
ACCGA068726GA068727
length9951,178
definitionB6Ng01-264P05.b B6Ng01-264P05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttatacattttgagtattagtcttctattgaatttgaagtggg
taaaaaaaatttcccattctgtcagttgctgctttgtcttattaatggtg
ttctttgctttacagaagcttttcagtctcaatttattagtttatcttag
ggctgtcactattggtgttccgttcagaaagttgtctcctgggccaatga
gttcaaggctgttcccaactttctcttctatcagtttcagtgcgtctgtt
tttatgttgaggtatttgatccacttgggcgtgaattttgtttagagtgg
taaatatgggtctaattgcattcttctagctgtggacatccagtttgaga
aacgccatttgttgaaggtgctgtctttttttccagtgggtatttctagc
ttctttattttttttaaaaaatcgggtttctacatgtgtttggattaatg
tctggttctttaattcaattccatagatcaacatgtctgcttttatacta
tgtggttttcattactacacatcaggaggacaacttgaaatgaggaatgg
tgatctctccagcagctcttttttttgtgcacaattcttttagctatcct
ggaccttttgattttctgtatgaagttgagatttgtcatctcatgatctg
taaataactgtattggaattttgatggagattgccttgaatctgttggta
gcttacttttcataggatttaatatgttaatcctaccaatccataagcat
gggagatctttcttgtatctagcctctttggcaaagttgtttatctgctg
aaggagttctctggtggaatttttagtttgcttgtatatattatcatatt
catctgcaaataaatgttactttgactcctttccctttctaatttgcatt
ccccttgatttgtttccattgtctcatttctctagataagaatttcaagg
actttattgggatagatattggggagaatttagtggaaatcattt

gaattcctgtgaaggttgactgagtgagaaactggaagagctggttccat
catggagcaggaagaacagaggtcaagtaaggagtcagtgagggaataga
ctgatatactccttaccccttggcagcagtagctctggtgatggagcagg
gccatcatgggtctggccaccaaatgcctctccctttgaagaactaaagc
tgcacaaagggccaagacatgcaggggtcaagggagacactgagattgaa
acaaggtcatattctacagaggatcttcaagtaaatattgatgacaattt
agggaatctgaggagatggctgagctggacgattaggggaatcctgagtc
tggtgtgccaggtccaatagtgaagataaagaatcagacagttaacctat
cccagaggccactcactggtccagcataagacagaccactgtctgcagtt
gttgaggaaaaagatggctgatgtgacatgatgggtggctgttttcacat
ctcaagaatacaaacgatctcttaaatgtggacagcttattactgggagc
actaatgcttaccaaagaccaacttcttggtttacggaataatcagagtg
aaattctaacctcttcaggaaacttcaactgtttggcctcctgggagaac
ttgttaccagaaactaatgacctggcagtaggccaagacttcctgaatag
ggaagctgtgaacataatggccttaaatttatgagattgtgcacctggca
ttctccaaccctgaccgtaggcattcatgggagaatgagtcaatgaaggt
ccagttggcaagctagacaaagctgtgtcttactccacttgaatatcacc
accaactacttaagcacatcaattcaaactgaacccttatattttttcta
caagttggaatttttaaatattttttttgattaggaaatttctccattta
cattcccaatgctatcccaaaggtcctccatattcctcctctccacactc
ccctaccccacccactcccacttcttgggccctgggtgttccccagtact
ggaggcatacaagttttgcaagacccaatgggcctctctcttctaaatga
atggcctgaacaagccatccttgaatacaatatgcccagcctaggaacaa
gagctctgggaactgtagtcataatgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_22123170_22124334
seq2: B6Ng01-264P05.g_70_1247

seq1  GAATTCCTGTGAAGGTTGACTGAGTGAGAAACTGGAAGAGCTGGTTCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTGAAGGTTGACTGAGTGAGAAACTGGAAGAGCTGGTTCCAT  50

seq1  CATGGAGCAGGAAGAACAGAGGTCAAGTAAGGAGTCAGTGAGGGAATAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAGCAGGAAGAACAGAGGTCAAGTAAGGAGTCAGTGAGGGAATAGA  100

seq1  CTGATATACTCCTTACCCCTTGGCAGCAGTAGCTCTGGTGATGGAGCAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATATACTCCTTACCCCTTGGCAGCAGTAGCTCTGGTGATGGAGCAGG  150

seq1  GCCATCATGGGTCTGGCCACCAAATGCCTCTCCCTTTGAAGAACTAAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCATGGGTCTGGCCACCAAATGCCTCTCCCTTTGAAGAACTAAAGC  200

seq1  TGCACAAAGGGCCAAGACATGCAGGGGTCAAGGGAGACACTGAGATTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAAAGGGCCAAGACATGCAGGGGTCAAGGGAGACACTGAGATTGAA  250

seq1  ACAAGGTCATATTCTACAGAGGATCTTCAAGTAAATATTGATGACAATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGTCATATTCTACAGAGGATCTTCAAGTAAATATTGATGACAATTT  300

seq1  AGGGAATCTGAGGAGATGGCTGAGCTGGACGATTAGGGGAATCCTGAGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAATCTGAGGAGATGGCTGAGCTGGACGATTAGGGGAATCCTGAGTC  350

seq1  TGGTGTGCCAGGTCCAATAGTGAAGATAAAGAATCAGACAGTTAACCTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTGCCAGGTCCAATAGTGAAGATAAAGAATCAGACAGTTAACCTAT  400

seq1  CCCAGAGGCCACTCACTGGTCCAGCATAAGACAGACCACTGTCTGCAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAGGCCACTCACTGGTCCAGCATAAGACAGACCACTGTCTGCAGTT  450

seq1  GTTGAGGAAAAAGATGGCTGATGTGACATGATGGGTGGCTGTTTTCACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGGAAAAAGATGGCTGATGTGACATGATGGGTGGCTGTTTTCACAT  500

seq1  CTCAAGAATACAAACGATCTCTTAAATGTGGACAGCTTATTACTGGGAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGAATACAAACGATCTCTTAAATGTGGACAGCTTATTACTGGGAGC  550

seq1  ACTAATGCTTACCAAAGACCAACTTCTTGGTTTACGGAATAATCAGAGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATGCTTACCAAAGACCAACTTCTTGGTTTACGGAATAATCAGAGTG  600

seq1  AAATTCTAACCTCTTCAGGAAACTTCAACTGTTTGGCCTCCTGGGAGAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTAACCTCTTCAGGAAACTTCAACTGTTTGGCCTCCTGGGAGAAC  650

seq1  TTGTTACCAGAAACTAATGACCTGGCAGTAGGCCAAGACTTCCTGAATAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTACCAGAAACTAATGACCTGGCAGTAGGCCAAGACTTCCTGAATAG  700

seq1  GGAAGCTGTGAACATAATGGCCTTAAATTTATGAGATTGTGCACCTGGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCTGTGAACATAATGGCCTTAAATTTATGAGATTGTGCACCTGGCA  750

seq1  TTCTCCAACCCTGACCGTAGGCATTCATGGGAGAATGAGTCAATGAAGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCAACCCTGACCGTAGGCATTCATGGGAGAATGAGTCAATGAAGGT  800

seq1  CCAGTTGGCAAGCTAGACAAAGCTGTGTCTTACTCCACTTGAATATCACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTGGCAAGCTAGACAAAGCTGTGTCTTACTCCACTTGAATATCACC  850

seq1  ACCAACTACTTAAGCACATCAATTCAAACTGAA-CCTTATA-TTTTTCTA  898
      ||||||||||||||||||||||||||||||||| ||||||| ||||||||
seq2  ACCAACTACTTAAGCACATCAATTCAAACTGAACCCTTATATTTTTTCTA  900

seq1  CAAGTTGGAATTTTTAAATATTTTTTTTGATTAGAAATTTTCTCCATTTA  948
      |||||||||||||||||||||||||||||||||| || ||||||||||||
seq2  CAAGTTGGAATTTTTAAATATTTTTTTTGATTAGGAAATTTCTCCATTTA  950

seq1  CATTTCCAATGCTATCCCAAAAGTCCTCCATA-TCCT-CTCTCCACACTC  996
      |||| |||||||||||||||| |||||||||| |||| ||||||||||||
seq2  CATTCCCAATGCTATCCCAAAGGTCCTCCATATTCCTCCTCTCCACACTC  1000

seq1  CCCTA-CCCACCCACTCCCACTTCTT-GGCCCT-GGTGTTCCCCAGTACT  1043
      ||||| |||||||||||||||||||| |||||| ||||||||||||||||
seq2  CCCTACCCCACCCACTCCCACTTCTTGGGCCCTGGGTGTTCCCCAGTACT  1050

seq1  -GAGGCATACAAAGTTTGCAAGA-CCAATGGGCCTCTCT-TTCT-AATG-  1088
       |||||||||||  ||||||||| ||||||||||||||| |||| |||| 
seq2  GGAGGCATACAAGTTTTGCAAGACCCAATGGGCCTCTCTCTTCTAAATGA  1100

seq1  ATGG-CTGACAAGGCCATCTTTTGATAC-ATATG--CAG-CTAGAGACAA  1133
      |||| ||||  | |||||| ||  |||| |||||  ||| ||||  ||||
seq2  ATGGCCTGAACAAGCCATCCTTGAATACAATATGCCCAGCCTAGGAACAA  1150

seq1  GAGCTCTGGGGTACTGGTTAGTTCATAATGTT  1165
      ||||||| ||| ||||  ||| ||||||||||
seq2  GAGCTCT-GGGAACTG--TAG-TCATAATGTT  1178


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