BAC Information

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BAC

Clone NameB6Ng01-265E14
Chromosome4 (Build37)
Map Location 20,378,422 - 20,379,617
singlet/doubletsinglet
Overlap geneE130310K16Rik
Upstream geneCngb3, Cpne3, LOC100040306, 2410005O16Rik, Wwp1, Slc7a13, Atp6v0d2, LOC667282, Ttpa, LOC667301, EG664800
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265E14.bB6Ng01-265E14.g
ACCGA068976GA068977
length1,1781,194
definitionB6Ng01-265E14.b B6Ng01-265E14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttctaccaagcaaagcatcagaaggcccctttaaaactatatt
gtcaaattgctgcactttgttctagagagcgggtcaattcctgtctccac
acagctcaagcaaattgaatttttgttgctgaaataaatgtagaaagaga
gagcttgttctgaaaggacttctctgcacgattctttttcagcactgtag
ttccttaaggggattctgtgggaagcatatttacctgtcctttagtgtga
gtcagtactggctctgagctaagctatggaaggaacaatgaacagtcttc
tgcttgaggaacactcttgtctctgtaagctcaggaacattaacaccaat
agcatcaagaggatgccatagacacatttcccccttactgtgcctcactc
agtagatagtttaggtcactgccaggcacactgtgtaacttaagacctcc
tgtgttttaaacttattttattcatagtcacctctccagtgcagtgacct
cagttctgacccccatagcccacagagttctctatatggtacatgatgac
caaaggagagactgaaaatgagtgtggagttgaggcagaaaattggaaga
agccaatcaagaaaagcaaatgcacaaactcaaagcacttttctgaagga
aaatactagcatctttgtgaaagtcatgtgaaatgcttttctttacagag
aacgacatacgcctaagctcattttttcctggtaaagcagcttcggatcc
tggggagaatcctggtaaagactatgcttccagccctggtatagagtgtg
tctgctttctattatcactgcaaccaccccaagcatcctcctgttagttc
tcactgaatgtttgactttcctgttattaattgtcactgcttacattttt
tactttacagaggcatcaaagttataccgattctgaataagtggtacaat
ttagggttttttcttttttttcttttttttttttttcactgtgctagtga
taaattaacaaatgagaagtttatttttgcctacagttcaggggataaca
ttactttatgatgggagtgcagacagagtggattcacatcttcacataat
atacagggaaacagaaacctagatcgatctgatcttaggaattctcttta
gcattccagtatgccacttcctctagta

gaattctttgtttgactctataccccatttataatagggttattttgttc
tctaaagtctaacttcttgagttctttgaatacattggatattattcctc
tatcagatatattattggtaaacatctttcccaatctgttgccattttgt
cctattgacagtgtcctttgccttacagaagctttgcaattttatgaggt
tccatttgtctattgttgatcttagagcagaaaccattggtgttctgttc
aggaaattttaccctatgcccatgtgtttgaggctcttcccctctttatt
tctattagtttcagtatatctggttttatgtggaggtccttgatccactt
ggacttgagctttgtacaaggagataagaatggatggatttgcattcttc
tccatgcttatcactagtttaaccagcaccatttgtttaaatgttttcca
ctaaaaccatctttgccaaagctcaagtgaccacaggtgtgtgggttcat
ttttggttcttcaattctattccatcgatcttcttgcctgtcactgtacc
aatatcatgcagtttttatcactattgttctgtaatacaggttgaagtca
gggatgttgattccaccagaagttcttttatttttgagaatcgtttttgc
tatcctgagtttttggttattctaaatgaatttaagaattgctctctcta
agaagaattgagttggaattttgatgaggattgcattgaatctttagatt
gctttttgcaagaatccatatttattatattaatcctgccaatccatgag
catgggaggtctttccatcttctgtgatcttcatcaatttcttttttcag
agacttgaagttcttgttatacagatctttcttttccttgggttagagtc
acactaaggtattttatattatttgtaaatattgtgagggtttcattttc
ctaatttcttcctcagcctctttattctctcatggtagacatatgtttcc
tggacaacttttcttactgtaatagattcacccaagtggggtttgtcagc
tcagctatttcttccctcatgctagcttctaaaatagctccacctcattg
tcagtaccattgccgttatctagaaccttatgaggatcattggcattctg
gcattaccgagtatatggaacttattctttaacgccgcagtata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_20378422_20379617
seq2: B6Ng01-265E14.b_48_1225

seq1  GAATTCTTTCTACCAAGCAAAGCATCAGAAGGCCCCTTTAAAACTATATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTACCAAGCAAAGCATCAGAAGGCCCCTTTAAAACTATATT  50

seq1  GTCAAATTGCTGCACTTTGTTCTAGAGAGCGGGTCAATTCCTGTCTCCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAATTGCTGCACTTTGTTCTAGAGAGCGGGTCAATTCCTGTCTCCAC  100

seq1  ACAGCTCAAGCAAATTGAATTTTTGTTGCTGAAATAAATGTAGAAAGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTCAAGCAAATTGAATTTTTGTTGCTGAAATAAATGTAGAAAGAGA  150

seq1  GAGCTTGTTCTGAAAGGACTTCTCTGCACGATTCTTTTTCAGCACTGTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTGTTCTGAAAGGACTTCTCTGCACGATTCTTTTTCAGCACTGTAG  200

seq1  TTCCTTAAGGGGATTCTGTGGGAAGCATATTTACCTGTCCTTTAGTGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTAAGGGGATTCTGTGGGAAGCATATTTACCTGTCCTTTAGTGTGA  250

seq1  GTCAGTACTGGCTCTGAGCTAAGCTATGGAAGGAACAATGAACAGTCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTACTGGCTCTGAGCTAAGCTATGGAAGGAACAATGAACAGTCTTC  300

seq1  TGCTTGAGGAACACTCTTGTCTCTGTAAGCTCAGGAACATTAACACCAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGAGGAACACTCTTGTCTCTGTAAGCTCAGGAACATTAACACCAAT  350

seq1  AGCATCAAGAGGATGCCATAGACACATTTCCCCCTTACTGTGCCTCACTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCAAGAGGATGCCATAGACACATTTCCCCCTTACTGTGCCTCACTC  400

seq1  AGTAGATAGTTTAGGTCACTGCCAGGCACACTGTGTAACTTAAGACCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGATAGTTTAGGTCACTGCCAGGCACACTGTGTAACTTAAGACCTCC  450

seq1  TGTGTTTTAAACTTATTTTATTCATAGTCACCTCTCCAGTGCAGTGACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTTAAACTTATTTTATTCATAGTCACCTCTCCAGTGCAGTGACCT  500

seq1  CAGTTCTGACCCCCATAGCCCACAGAGTTCTCTATATGGTACATGATGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCTGACCCCCATAGCCCACAGAGTTCTCTATATGGTACATGATGAC  550

seq1  CAAAGGAGAGACTGAAAATGAGTGTGGAGTTGAGGCAGAAAATTGGAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGAGAGACTGAAAATGAGTGTGGAGTTGAGGCAGAAAATTGGAAGA  600

seq1  AGCCAATCAAGAAAAGCAAATGCACAAACTCAAAGCACTTTTCTGAAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAATCAAGAAAAGCAAATGCACAAACTCAAAGCACTTTTCTGAAGGA  650

seq1  AAATACTAGCATCTTTGTGAAAGTCATGTGAAATGCTTTTCTTTACAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTAGCATCTTTGTGAAAGTCATGTGAAATGCTTTTCTTTACAGAG  700

seq1  AACGACATACGCCTAAGCTCATTTTTTCCTGGTAAAGCAGCTTCGGATCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGACATACGCCTAAGCTCATTTTTTCCTGGTAAAGCAGCTTCGGATCC  750

seq1  TGGGGAGAATCCTGGTAAAGACTATGCTTCCAGCCCTGGTATAGAGTGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAGAATCCTGGTAAAGACTATGCTTCCAGCCCTGGTATAGAGTGTG  800

seq1  TCTGCTTTCTATTATCACTGCAACCACCCCAAGCATCCTCCTGTTAGTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTTCTATTATCACTGCAACCACCCCAAGCATCCTCCTGTTAGTTC  850

seq1  TCACTGAATGTTTGACTTTCCTGTTATTAATTGTCACTGCTTACATTTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGAATGTTTGACTTTCCTGTTATTAATTGTCACTGCTTACATTTTT  900

seq1  TACTTTACAGAGGCATCAAAGTTATACCGATTCTGAATAAGTGGTACAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTACAGAGGCATCAAAGTTATACCGATTCTGAATAAGTGGTACAAT  950

seq1  TTAGGGTTTTTTCTTTTTTTTC-TTTTTTTTTTTTTCACTGTGCTAGTGA  999
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTAGGGTTTTTTCTTTTTTTTCTTTTTTTTTTTTTTCACTGTGCTAGTGA  1000

seq1  TAAAATTAACAAAATGAGAAGTTTA-TTTTGCCTACAGTTCCAGGGGGAT  1048
      | |||||||| |||||||||||||| |||||||||||||||   ||||||
seq2  T-AAATTAAC-AAATGAGAAGTTTATTTTTGCCTACAGTTC--AGGGGAT  1046

seq1  AACATTACTTTATGATGGGGAAGTGGCAGGAACAGGAAGTTGGGAATTCA  1098
      |||||||||||||||||||  ||| ||||  ||||  |||   | |||||
seq2  AACATTACTTTATGATGGG--AGT-GCAG--ACAG--AGT---GGATTCA  1086

seq1  CATCTTCAAACCATAAATATACA-GGAGACAGAAAACTAGAATCGATCTG  1147
      ||||||||   ||| |||||||| ||| ||||||| |||| |||||||||
seq2  CATCTTCA---CAT-AATATACAGGGAAACAGAAACCTAG-ATCGATCTG  1131

seq1  AATCTTA-GAATACTCATAACCCACTCCCAGTGATG-CACTTCCTCTAGT  1195
       |||||| |||| ||| | | |   | ||||| ||| |||||||||||||
seq2  -ATCTTAGGAATTCTCTTTAGC--ATTCCAGT-ATGCCACTTCCTCTAGT  1177

seq1  A  1196
      |
seq2  A  1178


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