BAC Information

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BAC

Clone NameB6Ng01-265K07
Chromosome4 (Build37)
Map Location 23,565,850 - 23,646,771
singlet/doubletdoublet
Overlap geneLOC100040464
Upstream gene1700025O08Rik, LOC625462, LOC383998
Downstream geneLOC623873, LOC664973, F730047E07Rik, Klhl32
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265K07.bB6Ng01-265K07.g
ACCGA069238GA069239
length1,1551,063
definitionB6Ng01-265K07.b B6Ng01-265K07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,645,616 - 23,646,771)(23,565,850 - 23,566,921)
sequence
gaattccaggcaagatctaaaagatggttggaagcgattttgtattattt
aaagaacatcaaatgagggattttgtattatttaaagaaccacaagtaat
agtcaataataaggtattgtaaacctaaaataaatacctcctggcaatac
ataataataaggaaaccatgatcagaaacagtcaaggactttcacactat
tctccataatacacacatggtgtgctttcttttttttttttttttttgct
attcgagacaggtttctctgtgtagccctggctgtccgggagctcactct
gtagaccaggctggcctcgaactcagaaatcctcctgcctctgcctccca
agtgctgggattaaaggcatgtgccaccacacccggcttagtgttcttaa
ttcaacaagtgcccagactgcagctacctatgccctggtccactaccagt
gggaaaatagcattttatggtaaccactgagttatggtttaataaacagg
ctaacatgcactcggtttctcagtacactatcttcacaatgaattcttta
attcaaaggaaagtgctaaggaaaggtgactacgttgattattttgcctt
gattatctactttttaaatagataacaaacactccttacaatcagaaatt
acgctgcagtttctatgacttatagcatgtgatgacaaccctgaactctc
tctgccaaaagattgaagctaaggatatcaacatccctttcgtagttctg
cctgaacacatggcagtaatgtaccattgtgaatatttggctgtttatgt
ctaacaatgattattttaaaatcaggtgggaaaaagatacttgactgcaa
gtgataggaaacatgtaaacttattttattatttcagttcattaatttta
tattgcatacatttttcttataaatgtattatattagaatgtgcataaat
tatattctactggtatgtgtttatagattggctatattagtaaccatata
aacaaaatatttgtactattatgattgcagtatgcattagcatagaaaaa
tataaactaaaattcatttttatactcacttagcctcagaaaataacctt
aaaggttataggaattctactatattctctcttcagcatcacttccatca
tgaat
gaattccctgggaccccagcaccaggctgagattctgcgacatacatcct
caatgacaaaacagtttctggattcttcccattgttgtcaggagacactt
gttggattttctgaatcacaatggataagacactctagtatatttataga
tagagacgtaaatgaaagttataaaatgagatagatataggtatgagcat
atacatctattatttctgtccctttagagatctctggttaatacagtacc
aaatcaatatgttaaaaaattaatcgatgagtaaattacaaataataaat
gaaaccatatcagtaagcgtgtttagggaggcttaattgtttcagatacc
gtgctttcctgcacattccataacagtctttaaagtttggaattattctc
atccttcaagtgagggatttgtggctatgagactttgtatatttatttat
gatgacataataggaaaggaagaaacatgtggatttgagcacaagataat
ctaactccttacagaaattctctaaaccaattaataatgtgttttgaaaa
ttaaaattcttctaattgtcaatagttttttatattgtttgcaaggatag
aaaatctgaatttataggagttcgcagaagaattgctatcaactgaataa
taatatcttattttgccaagtgttaatctttcctaacagcaaggattatt
aagaaaacaacaccctggtattgttgagatctttggaacagattgtactt
aaatttgtcttaataattttatgtgaaatctggacgagctggtgaggtga
tacttaaagatgcatttagcataggtttgctgtaataatagaatgtaaca
ttttctagaatatttttcattgtaatgtatcaaagtgtacagatgctttc
aattcattgtctctagccttcagtaccatatcaatggtagtagcatgata
tatacattattataatacatgactgataaagttcctgatgaaattaagtt
gaaagaaataaaaagcacagcagaggagagacccattgctttatatatta
atgtatttagttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_23645616_23646771
seq2: B6Ng01-265K07.b_47_1201 (reverse)

seq1  ATTCATGATGGAAGTGAATGCTTGAAGAGATTAAATAGTAGAATTTCTGA  50
      |||||||||||||||| |||| ||||||||  | ||||||||||| || |
seq2  ATTCATGATGGAAGTG-ATGC-TGAAGAGAGAATATAGTAGAATTCCT-A  47

seq1  TAACTTTAAAGTTTTATTTCTGA-GCTAAGT-AGTAT-AAAATGAATTTT  97
      |||| || ||| ||  ||||||| ||||||| ||||| |||||||| |||
seq2  TAACCTTTAAGGTTATTTTCTGAGGCTAAGTGAGTATAAAAATGAA-TTT  96

seq1  TAGTTTATATTTTCTAATGCCTAATGCATTACTGCAATTCAT-ATAGTAC  146
      |||||||||||||   ||| |||||||| |||||||| |||| |||||||
seq2  TAGTTTATATTTTTCTATG-CTAATGCA-TACTGCAA-TCATAATAGTAC  143

seq1  -AATATTTTGTTTATATGTGTACTAATATAGCCAATCTTATAAACACATA  195
       |||||||||||||||||  ||||||||||||||||| ||||||||||||
seq2  AAATATTTTGTTTATATGGTTACTAATATAGCCAATC-TATAAACACATA  192

seq1  CCAGTAG-ATATAATTTATGCACATTCTAATATAATACATTTATAAG-AA  243
      ||||||| ||||||||||||||||||||||||||||||||||||||| ||
seq2  CCAGTAGAATATAATTTATGCACATTCTAATATAATACATTTATAAGAAA  242

seq1  AATGTATGCAATATAAAATTAATGAACTGAAATAATAAAATAAGTTTACA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTATGCAATATAAAATTAATGAACTGAAATAATAAAATAAGTTTACA  292

seq1  TGTTTCCTATCACTTGCAGTCAAGTATCTTTTTCCCACCTGATTTTAAAA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCCTATCACTTGCAGTCAAGTATCTTTTTCCCACCTGATTTTAAAA  342

seq1  TAATCATTGTTAGACATAAACAGCCAAATATTCACAATGGTACATTACTG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCATTGTTAGACATAAACAGCCAAATATTCACAATGGTACATTACTG  392

seq1  CCATGTGTTCAGGCAGAACTACGAAAGGGATGTTGATATCCTTAGCTTCA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTGTTCAGGCAGAACTACGAAAGGGATGTTGATATCCTTAGCTTCA  442

seq1  ATCTTTTGGCAGAGAGAGTTCAGGGTTGTCATCACATGCTATAAGTCATA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTGGCAGAGAGAGTTCAGGGTTGTCATCACATGCTATAAGTCATA  492

seq1  GAAACTGCAGCGTAATTTCTGATTGTAAGGAGTGTTTGTTATCTATTTAA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTGCAGCGTAATTTCTGATTGTAAGGAGTGTTTGTTATCTATTTAA  542

seq1  AAAGTAGATAATCAAGGCAAAATAATCAACGTAGTCACCTTTCCTTAGCA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAGATAATCAAGGCAAAATAATCAACGTAGTCACCTTTCCTTAGCA  592

seq1  CTTTCCTTTGAATTAAAGAATTCATTGTGAAGATAGTGTACTGAGAAACC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTTTGAATTAAAGAATTCATTGTGAAGATAGTGTACTGAGAAACC  642

seq1  GAGTGCATGTTAGCCTGTTTATTAAACCATAACTCAGTGGTTACCATAAA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCATGTTAGCCTGTTTATTAAACCATAACTCAGTGGTTACCATAAA  692

seq1  ATGCTATTTTCCCACTGGTAGTGGACCAGGGCATAGGTAGCTGCAGTCTG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTATTTTCCCACTGGTAGTGGACCAGGGCATAGGTAGCTGCAGTCTG  742

seq1  GGCACTTGTTGAATTAAGAACACTAAGCCGGGTGTGGTGGCACATGCCTT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTTGTTGAATTAAGAACACTAAGCCGGGTGTGGTGGCACATGCCTT  792

seq1  TAATCCCAGCACTTGGGAGGCAGAGGCAGGAGGATTTCTGAGTTCGAGGC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCCAGCACTTGGGAGGCAGAGGCAGGAGGATTTCTGAGTTCGAGGC  842

seq1  CAGCCTGGTCTACAGAGTGAGCTCCCGGACAGCCAGGGCTACACAGAGAA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGGTCTACAGAGTGAGCTCCCGGACAGCCAGGGCTACACAGAGAA  892

seq1  ACCTGTCTCGAATAGCAAAAAAAAAAAAAAAAAAGAAAGCACACCATGTG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTCTCGAATAGCAAAAAAAAAAAAAAAAAAGAAAGCACACCATGTG  942

seq1  TGTATTATGGAGAATAGTGTGAAAGTCCTTGACTGTTTCTGATCATGGTT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTATGGAGAATAGTGTGAAAGTCCTTGACTGTTTCTGATCATGGTT  992

seq1  TCCTTATTATTATGTATTGCCAGGAGGTATTTATTTTAGGTTTACAATAC  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTATTATTATGTATTGCCAGGAGGTATTTATTTTAGGTTTACAATAC  1042

seq1  CTTATTATTGACTATTACTTGTGGTTCTTTAAATAATACAAAATCCCTCA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTATTGACTATTACTTGTGGTTCTTTAAATAATACAAAATCCCTCA  1092

seq1  TTTGATGTTCTTTAAATAATACAAAATCGCTTCCAACCATCTTTTAGATC  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATGTTCTTTAAATAATACAAAATCGCTTCCAACCATCTTTTAGATC  1142

seq1  TTGCCTGGAATTC  1156
      |||||||||||||
seq2  TTGCCTGGAATTC  1155

seq1: chr4_23565850_23566921
seq2: B6Ng01-265K07.g_65_1127

seq1  GAATTCCCTGGGACCCCAGCACCAGGCTGAGATTCTGCGACATACATCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTGGGACCCCAGCACCAGGCTGAGATTCTGCGACATACATCCT  50

seq1  CAATGACAAAACAGTTTCTGGATTCTTCCCATTGTTGTCAGGAGACACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGACAAAACAGTTTCTGGATTCTTCCCATTGTTGTCAGGAGACACTT  100

seq1  GTTGGATTTTCTGAATCACAATGGATAAGACACTCTAGTATATTTATAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGATTTTCTGAATCACAATGGATAAGACACTCTAGTATATTTATAGA  150

seq1  TAGAGACGTAAATGAAAGTTATAAAATGAGATAGATATAGGTATGAGCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGACGTAAATGAAAGTTATAAAATGAGATAGATATAGGTATGAGCAT  200

seq1  ATACATCTATTATTTCTGTCCCTTTAGAGATCTCTGGTTAATACAGTACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATCTATTATTTCTGTCCCTTTAGAGATCTCTGGTTAATACAGTACC  250

seq1  AAATCAATATGTTAAAAAATTAATCGATGAGTAAATTACAAATAATAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAATATGTTAAAAAATTAATCGATGAGTAAATTACAAATAATAAAT  300

seq1  GAAACCATATCAGTAAGCGTGTTTAGGGAGGCTTAATTGTTTCAGATACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCATATCAGTAAGCGTGTTTAGGGAGGCTTAATTGTTTCAGATACC  350

seq1  GTGCTTTCCTGCACATTCCATAACAGTCTTTAAAGTTTGGAATTATTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTTCCTGCACATTCCATAACAGTCTTTAAAGTTTGGAATTATTCTC  400

seq1  ATCCTTCAAGTGAGGGATTTGTGGCTATGAGACTTTGTATATTTATTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTCAAGTGAGGGATTTGTGGCTATGAGACTTTGTATATTTATTTAT  450

seq1  GATGACATAATAGGAAAGGAAGAAACATGTGGATTTGAGCACAAGATAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACATAATAGGAAAGGAAGAAACATGTGGATTTGAGCACAAGATAAT  500

seq1  CTAACTCCTTACAGAAATTCTCTAAACCAATTAATAATGTGTTTTGAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTCCTTACAGAAATTCTCTAAACCAATTAATAATGTGTTTTGAAAA  550

seq1  TTAAAATTCTTCTAATTGTCAATAGTTTTTTATATTGTTTGCAAGGATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATTCTTCTAATTGTCAATAGTTTTTTATATTGTTTGCAAGGATAG  600

seq1  AAAATCTGAATTTATAGGAGTTCGCAGAAGAATTGCTATCAACTGAATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTGAATTTATAGGAGTTCGCAGAAGAATTGCTATCAACTGAATAA  650

seq1  TAATATCTTATTTTGCCAAGTGTTAATCTTTCCTAACAGCAAGGATTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATCTTATTTTGCCAAGTGTTAATCTTTCCTAACAGCAAGGATTATT  700

seq1  AAGAAAACAACACCCTGGTATTGTTGAGATCTTTGGAACAGATTGTACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAACAACACCCTGGTATTGTTGAGATCTTTGGAACAGATTGTACTT  750

seq1  AAATTTGTCTTAATAATTTTATGTGAAATCTGGACGAGCTGGTGAGGTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTGTCTTAATAATTTTATGTGAAATCTGGACGAGCTGGTGAGGTGA  800

seq1  TACTTAAAGATGCATTTAGCATAGGTTTGCTGTAATAATAGAATGTAACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTAAAGATGCATTTAGCATAGGTTTGCTGTAATAATAGAATGTAACA  850

seq1  TTTTCTAGAATATTTTTCATTGTAATGTATCAAAGTGTACAGATGCTTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTAGAATATTTTTCATTGTAATGTATCAAAGTGTACAGATGCTTTC  900

seq1  AATTCATTGTCTCTAGCCTTCAGTACCATATCAATGGTAGTAGCATGATA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATTGTCTCTAGCCTTCAGTACCATATCAATGGTAGTAGCATGATA  950

seq1  TATACATTATTATTAATACATGACTGATAAAAGTTCCTGATGAAATTAAG  1000
      |||||||||||| ||||||||||||||| |||||||||||||||||||||
seq2  TATACATTATTA-TAATACATGACTGAT-AAAGTTCCTGATGAAATTAAG  998

seq1  TTTGAAAGAAATAAAAAGCAACAAGCAGAGGAGAGACCCATTGGTTTTAT  1050
       |||||||||||||||||||   |||||||||||||||||||| |    |
seq2  -TTGAAAGAAATAAAAAGCA--CAGCAGAGGAGAGACCCATTGCT----T  1041

seq1  TATTATTTAATGTATTTAGTTT  1072
      |||   ||||||||||||||||
seq2  TATATATTAATGTATTTAGTTT  1063