BAC Information

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BAC

Clone NameB6Ng01-265N19
Chromosome4 (Build37)
Map Location 112,762,877 - 112,763,965
singlet/doubletsinglet
Overlap genenone
Upstream gene9530098N22Rik, A430090E18Rik, A030013N09Rik, LOC665949, LOC630887, OTTMUSG00000008540, LOC100040581, A030001H23Rik, LOC433745, LOC545668
Downstream geneLOC230622, LOC100040607, LOC242627
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265N19.g
ACCGA069402
length1,074
definitionB6Ng01-265N19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaatcaataacttgggctccattttgttatggtcaatctccaag
cacaaaatggcttaacaatgaaaatacaacccaattaatatgaatacatg
ctgtttgccaaattgggcagatctaccactacacttccatcttctgaatt
atgagaccctttggaacttgacgtttctccaggccatgtgtttctgctcc
tcttcttctcttccctttcctctgtgtactctccctcttccattttcttc
atctctttcccaactttccactcgactttccctttatctgcccaatataa
tgtttcattcagctcgattttatataatgatcatttttatgccataattt
gaatgcaatgtaaggttaatattttaacttatataatgcagcacaataga
tatcatgattttcctcttcttgaattgaagaaatagcatagatacaagca
aattattatatatgtgtgatgttaacataaaatccaatatcatctgggag
ttaaagacaacccaatagacaaagaaaaatggtatttttttgtgagggtc
aataactgcaatttactgtgatatgtcttcatgaaaatatcttaaataaa
ctcatctttatatgtgatgtatgtaggccacaaaaaaaaaaatcacaaag
tcatgaacactgttgccaaagttctctctgaaaagagtccatccccttaa
tatagatgacttcagtggatgcagtatggctatcatataagcagttggga
aataatttttatgaatgcctttattcatatttcgaccctatattctctgc
tttactggtggagctttagataatgctgtttttaaaagctggaattgcct
ttatatgaattactgaaacaactttaacaatgttgactcccattaatgat
agagatcgatcttgaaacatgtgtgtccatacccacggtgcagagtatgt
atagatatacagctatctaactttaacattgagttcaattcattacctct
accattgagtgaaaaatacaaataaactggctgatcagcacagtgacttc
tcagtcaatgacactgtggttcac
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_112762877_112763965
seq2: B6Ng01-265N19.g_65_1138 (reverse)

seq1  GTGACCCACAGTGTCCAATGACTCCAAGGAAGTCAACTGTGCTGAACCAG  50
      |||| ||||||||| || |||||     |||||| ||||||||| | |||
seq2  GTGAACCACAGTGT-CATTGACT---GAGAAGTC-ACTGTGCTG-ATCAG  44

seq1  CAAGTTTATTTGGTATTTTTCACTCAAATGGGTAAGAGGTTAATGAATTG  100
      | ||||||||| ||||||||||||| |||||   ||||| ||||||||||
seq2  CCAGTTTATTT-GTATTTTTCACTC-AATGG--TAGAGG-TAATGAATTG  89

seq1  AACCTCAATGGTTAAAAGTTAGATAGCTGTATATCTATACATTACTCTGC  150
      || |||||||  | ||||||||||||||||||||||||||| ||||||||
seq2  AA-CTCAATG--TTAAAGTTAGATAGCTGTATATCTATACA-TACTCTGC  135

seq1  ACCGTGGGTATGGACACACATGTTTCAAGATCGATCTCTATCATTAATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTGGGTATGGACACACATGTTTCAAGATCGATCTCTATCATTAATGG  185

seq1  GAGTCAACATTGTTAAAGTTGTTTCAGTAATTCATATAAAGGCAATTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAACATTGTTAAAGTTGTTTCAGTAATTCATATAAAGGCAATTCCA  235

seq1  GCTTTTAAAAACAGCATTATCTAAAGCTCCACCAGTAAAGCAGAGAATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTAAAAACAGCATTATCTAAAGCTCCACCAGTAAAGCAGAGAATAT  285

seq1  AGGGTCGAAATATGAATAAAGGCATTCATAAAAATTATTTCCCAACTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCGAAATATGAATAAAGGCATTCATAAAAATTATTTCCCAACTGCT  335

seq1  TATATGATAGCCATACTGCATCCACTGAAGTCATCTATATTAAGGGGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGATAGCCATACTGCATCCACTGAAGTCATCTATATTAAGGGGATG  385

seq1  GACTCTTTTCAGAGAGAACTTTGGCAACAGTGTTCATGACTTTGTGATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTTTTCAGAGAGAACTTTGGCAACAGTGTTCATGACTTTGTGATTT  435

seq1  TTTTTTTTGTGGCCTACATACATCACATATAAAGATGAGTTTATTTAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTGTGGCCTACATACATCACATATAAAGATGAGTTTATTTAAGA  485

seq1  TATTTTCATGAAGACATATCACAGTAAATTGCAGTTATTGACCCTCACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCATGAAGACATATCACAGTAAATTGCAGTTATTGACCCTCACAA  535

seq1  AAAAATACCATTTTTCTTTGTCTATTGGGTTGTCTTTAACTCCCAGATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATACCATTTTTCTTTGTCTATTGGGTTGTCTTTAACTCCCAGATGA  585

seq1  TATTGGATTTTATGTTAACATCACACATATATAATAATTTGCTTGTATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGATTTTATGTTAACATCACACATATATAATAATTTGCTTGTATCT  635

seq1  ATGCTATTTCTTCAATTCAAGAAGAGGAAAATCATGATATCTATTGTGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTATTTCTTCAATTCAAGAAGAGGAAAATCATGATATCTATTGTGCT  685

seq1  GCATTATATAAGTTAAAATATTAACCTTACATTGCATTCAAATTATGGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTATATAAGTTAAAATATTAACCTTACATTGCATTCAAATTATGGCA  735

seq1  TAAAAATGATCATTATATAAAATCGAGCTGAATGAAACATTATATTGGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATGATCATTATATAAAATCGAGCTGAATGAAACATTATATTGGGC  785

seq1  AGATAAAGGGAAAGTCGAGTGGAAAGTTGGGAAAGAGATGAAGAAAATGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAAGGGAAAGTCGAGTGGAAAGTTGGGAAAGAGATGAAGAAAATGG  835

seq1  AAGAGGGAGAGTACACAGAGGAAAGGGAAGAGAAGAAGAGGAGCAGAAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGGAGAGTACACAGAGGAAAGGGAAGAGAAGAAGAGGAGCAGAAAC  885

seq1  ACATGGCCTGGAGAAACGTCAAGTTCCAAAGGGTCTCATAATTCAGAAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGCCTGGAGAAACGTCAAGTTCCAAAGGGTCTCATAATTCAGAAGA  935

seq1  TGGAAGTGTAGTGGTAGATCTGCCCAATTTGGCAAACAGCATGTATTCAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGTGTAGTGGTAGATCTGCCCAATTTGGCAAACAGCATGTATTCAT  985

seq1  ATTAATTGGGTTGTATTTTCATTGTTAAGCCATTTTGTGCTTGGAGATTG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTGGGTTGTATTTTCATTGTTAAGCCATTTTGTGCTTGGAGATTG  1035

seq1  ACCATAACAAAATGGAGCCCAAGTTATTGATTGGAATTC  1089
      |||||||||||||||||||||||||||||||||||||||
seq2  ACCATAACAAAATGGAGCCCAAGTTATTGATTGGAATTC  1074