BAC Information

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BAC

Clone NameB6Ng01-265P05
Chromosome4 (Build37)
Map Location 63,445,005 - 63,638,882
singlet/doubletdoublet
Overlap geneTnfsf8, Rpl17-ps, Tnc
Upstream geneZfp618, Ambp, Kif12, Col27a1, Orm1, Orm-ps, Orm3, Orm2, Akna, Whrn, Atp6v1g1, 6330416G13Rik, LOC670833, 1700018C11Rik, LOC667451, Tnfsf15
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265P05.bB6Ng01-265P05.g
ACCGA069467GA069468
length8331,088
definitionB6Ng01-265P05.b B6Ng01-265P05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,445,005 - 63,445,629)(63,637,796 - 63,638,882)
sequence
gaattctcatgatcaggcagggctgactttgcccttggcctgacatgctc
atccagctttagtcggttagacagctttatgatcttggctaatgttactc
acatttctgggatacggccaactttattagttaatctgagctggggtggt
gatgggaagatctgacttactttcacagttctcagggtttgttaaatgtt
ccattaatgaacatttaatgttcataatgtaatcttaccaaagatacttc
atcattctgcatcaaatagtgttgatacgttctcagattttcttattttt
gatgattttcaccacttcaagatatactgatcaggtattttggatcaatc
cccatactgagaattgccagaagtttttcttgtgattagatttgagatta
gggttttgggcaaagtaccatagaagcaaaatgtcatttccatcccatca
tatcaagaatcagcatgtcttgaggttttcaatgaatctcatgtgagaac
ttatttttaattatataaatgatatgaggaagtacaaatctattaatttc
ttcaaattagttcagaagaatttaaacactttatttacttatttgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtggcattaaaaagtatgtatatggtac
ttaaaatatagtatctacctaatccctcctgaagagacctaatatcccag
gagtgcttacacacctaagatcacaggctcacaggctcacaggagagaca
agctacagtcagagacagcaagaacagctaacaccagacataaacaaatg
gtgagaggcaagtgcagaacatagacaacaaaa
gaattctctgcatgccagagtctatactaagggttttacatccattatct
ctactaatcctcaaaacattcctgtgggtaccactttcaccattggaagg
gtgtagcaactgaagctcactgaagggaagagacttgtcccaggctgccc
aacctctcagtggtgtttgaacaattaagatcttgtaggttcctcaaact
ctgtggcttgaaaaagaaaagatttgccacgtacagggagaataaaaaga
aaaagaaaaaaaaaggagtggtagccgcagagatctgggtagtttctggg
tcacaggaaaaaaaaaactgtaggagcagatgtgttagatgagagaaaaa
gacagaaatgggtatggaaaaaattctctccgaaaacctctacgtgtttc
caagcttaatgaccaaaacgggctgaagcagggaagtagtgaggaagcag
gctcccttgagactggaaattgtttcctgagttagcatggtcagctgaag
caggcagaatcctaagccaaaaaacacacagagagaagccaaaggaatcc
agatttggggaggagaagggaagacagcagccgggcccctctagtcatgg
gctgcttcttgccagtggacccagtgtccctggtgtaggtttagttatga
cctgaccttgcttcttggctttggatctccttgaagatacatgagtgggc
agtcaaaattagcttccaatgagcttaatttccggatgccaggctgccca
gtgcagtgatccagaaaggtcccatcagaataatgttagttggagaaggg
aggcttactttggtcgtttgtataatgactacaaccgaattttcatctca
tgcgtgtttatatgagaaatgagctctataagaaagaccatgcactttat
atcttaccattaaaaaaagaaacgtaaaacaacatctgggaaaaaatgcc
aaaaattaaatcaaaataagtaatcagatctgtgaagttcactctcctct
cctctgtgaaactgggccaattgtgctaacatcgatctgacgtgaagcaa
ttgaccatggagcccaacagtcacctggtactacgtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_63445005_63445629
seq2: B6Ng01-265P05.b_49_673

seq1  GAATTCTCATGATCAGGCAGGGCTGACTTTGCCCTTGGCCTGACATGCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATGATCAGGCAGGGCTGACTTTGCCCTTGGCCTGACATGCTC  50

seq1  ATCCAGCTTTAGTCGGTTAGACAGCTTTATGATCTTGGCTAATGTTACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGCTTTAGTCGGTTAGACAGCTTTATGATCTTGGCTAATGTTACTC  100

seq1  ACATTTCTGGGATACGGCCAACTTTATTAGTTAATCTGAGCTGGGGTGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCTGGGATACGGCCAACTTTATTAGTTAATCTGAGCTGGGGTGGT  150

seq1  GATGGGAAGATCTGACTTACTTTCACAGTTCTCAGGGTTTGTTAAATGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGAAGATCTGACTTACTTTCACAGTTCTCAGGGTTTGTTAAATGTT  200

seq1  CCATTAATGAACATTTAATGTTCATAATGTAATCTTACCAAAGATACTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTAATGAACATTTAATGTTCATAATGTAATCTTACCAAAGATACTTC  250

seq1  ATCATTCTGCATCAAATAGTGTTGATACGTTCTCAGATTTTCTTATTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTCTGCATCAAATAGTGTTGATACGTTCTCAGATTTTCTTATTTTT  300

seq1  GATGATTTTCACCACTTCAAGATATACTGATCAGGTATTTTGGATCAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATTTTCACCACTTCAAGATATACTGATCAGGTATTTTGGATCAATC  350

seq1  CCCATACTGAGAATTGCCAGAAGTTTTTCTTGTGATTAGATTTGAGATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATACTGAGAATTGCCAGAAGTTTTTCTTGTGATTAGATTTGAGATTA  400

seq1  GGGTTTTGGGCAAAGTACCATAGAAGCAAAATGTCATTTCCATCCCATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTTGGGCAAAGTACCATAGAAGCAAAATGTCATTTCCATCCCATCA  450

seq1  TATCAAGAATCAGCATGTCTTGAGGTTTTCAATGAATCTCATGTGAGAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAGAATCAGCATGTCTTGAGGTTTTCAATGAATCTCATGTGAGAAC  500

seq1  TTATTTTTAATTATATAAATGATATGAGGAAGTACAAATCTATTAATTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTAATTATATAAATGATATGAGGAAGTACAAATCTATTAATTTC  550

seq1  TTCAAATTAGTTCAGAAGAATTTAAACACTTTATTTACTTATTTGTGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATTAGTTCAGAAGAATTTAAACACTTTATTTACTTATTTGTGTGT  600

seq1  GTGTGTGTGTGTGTGTGTGTGTGTG  625
      |||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTG  625

seq1: chr4_63637796_63638882
seq2: B6Ng01-265P05.g_67_1154 (reverse)

seq1  CCACGTAG-ACCAGGTGACTG-TGGGCTTCATGGTCAATTGGCTTCACGC  48
      |||||||| |||||||||||| |||||| ||||||||||| |||||||| 
seq2  CCACGTAGTACCAGGTGACTGTTGGGCTCCATGGTCAATT-GCTTCACGT  49

seq1  AAGATGGATGTTAGCAC-ATTGG-CCAGTTTCCACAGAGGAGAGGAGAGT  96
       |||| ||||||||||| ||||| ||||||| ||||||||||||||||||
seq2  CAGATCGATGTTAGCACAATTGGCCCAGTTT-CACAGAGGAGAGGAGAGT  98

seq1  G-ACTTCACAGATCTGAATAACTTATTTTGATTTAATTTTTGGCATTTTT  145
      | |||||||||||||| || ||||||||||||||||||||||||||||||
seq2  GAACTTCACAGATCTG-ATTACTTATTTTGATTTAATTTTTGGCATTTTT  147

seq1  T-CCAGATGTTTGTTTTACGTTTC-TTTTTTAATGGTAAGATATAAAAGT  193
      | ||||||| |||||||||||||| ||||||||||||||||||| |||||
seq2  TCCCAGATG-TTGTTTTACGTTTCTTTTTTTAATGGTAAGATAT-AAAGT  195

seq1  GCATGGTTCTTTCTTATAGAGCTCATTTCTCATATAAACACGCATGAGAT  243
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGG-TCTTTCTTATAGAGCTCATTTCTCATATAAACACGCATGAGAT  244

seq1  GAAAATTCGGTTGTAGTCATTATACAAACGACCAAAGTAAGCCTCCCTTC  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTCGGTTGTAGTCATTATACAAACGACCAAAGTAAGCCTCCCTTC  294

seq1  TCCAACTAACATTATTCTGATGGGACCTTTCTGGATCACTGCACTGGGCA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACTAACATTATTCTGATGGGACCTTTCTGGATCACTGCACTGGGCA  344

seq1  GCCTGGCATCCGGAAATTAAGCTCATTGGAAGCTAATTTTGACTGCCCAC  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGCATCCGGAAATTAAGCTCATTGGAAGCTAATTTTGACTGCCCAC  394

seq1  TCATGTATCTTCAAGGAGATCCAAAGCCAAGAAGCAAGGTCAGGTCATAA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTATCTTCAAGGAGATCCAAAGCCAAGAAGCAAGGTCAGGTCATAA  444

seq1  CTAAACCTACACCAGGGACACTGGGTCCACTGGCAAGAAGCAGCCCATGA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACCTACACCAGGGACACTGGGTCCACTGGCAAGAAGCAGCCCATGA  494

seq1  CTAGAGGGGCCCGGCTGCTGTCTTCCCTTCTCCTCCCCAAATCTGGATTC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGGGGCCCGGCTGCTGTCTTCCCTTCTCCTCCCCAAATCTGGATTC  544

seq1  CTTTGGCTTCTCTCTGTGTGTTTTTTGGCTTAGGATTCTGCCTGCTTCAG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGCTTCTCTCTGTGTGTTTTTTGGCTTAGGATTCTGCCTGCTTCAG  594

seq1  CTGACCATGCTAACTCAGGAAACAATTTCCAGTCTCAAGGGAGCCTGCTT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCATGCTAACTCAGGAAACAATTTCCAGTCTCAAGGGAGCCTGCTT  644

seq1  CCTCACTACTTCCCTGCTTCAGCCCGTTTTGGTCATTAAGCTTGGAAACA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACTACTTCCCTGCTTCAGCCCGTTTTGGTCATTAAGCTTGGAAACA  694

seq1  CGTAGAGGTTTTCGGAGAGAATTTTTTCCATACCCATTTCTGTCTTTTTC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAGAGGTTTTCGGAGAGAATTTTTTCCATACCCATTTCTGTCTTTTTC  744

seq1  TCTCATCTAACACATCTGCTCCTACAGTTTTTTTTTTCCTGTGACCCAGA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATCTAACACATCTGCTCCTACAGTTTTTTTTTTCCTGTGACCCAGA  794

seq1  AACTACCCAGATCTCTGCGGCTACCACTCCTTTTTTTTTCTTTTTCTTTT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACCCAGATCTCTGCGGCTACCACTCCTTTTTTTTTCTTTTTCTTTT  844

seq1  TATTCTCCCTGTACGTGGCAAATCTTTTCTTTTTCAAGCCACAGAGTCTG  893
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TATTCTCCCTGTACGTGGCAAATCTTTTCTTTTTCAAGCCACAGAGTTTG  894

seq1  AGGAACCTACAAGATCTTAATTGTTCAAACACCACTGAGAGGTTGGGCAG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACCTACAAGATCTTAATTGTTCAAACACCACTGAGAGGTTGGGCAG  944

seq1  CCTGGGACAAGTCTCTTCCCTTCAGTGAGCTTCAGTTGCTACACCCTTCC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGACAAGTCTCTTCCCTTCAGTGAGCTTCAGTTGCTACACCCTTCC  994

seq1  AATGGTGAAAGTGGTACCCACAGGAATGTTTTGAGGATTAGTAGAGATAA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTGAAAGTGGTACCCACAGGAATGTTTTGAGGATTAGTAGAGATAA  1044

seq1  TGGATGTAAAACCCTTAGTATAGACTCTGGCATGCAGAGAATTC  1087
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGTAAAACCCTTAGTATAGACTCTGGCATGCAGAGAATTC  1088