BAC Information

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BAC

Clone NameB6Ng01-266L18
Chromosome4 (Build37)
Map Location 74,556,423 - 74,557,538
singlet/doubletsinglet
Overlap genenone
Upstream geneOTTMUSG00000004010, 2310002L09Rik, Frmd3, LOC100039774, Jmjd2c, LOC100040258, LOC100039814
Downstream geneLOC636847, 3110001D03Rik, LOC623529, LOC100039833, LOC100039884, LOC667845
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266L18.bB6Ng01-266L18.g
ACCGA070055GA070056
length1,2141,112
definitionB6Ng01-266L18.b B6Ng01-266L18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttctttagctctgtatctcattttttataatattatttggttc
tctggagtctaacttcttgagttctttgtacattttagatattagccctc
tatcagatgtagggttggtaaaagacttttcctaatctgtgggttgcctt
acagatgcttttccattttatgaagttacatttgtcaattgtcattctta
gagcatgagccattggtcttttgttcaagaaaatttcccccttgccaata
tgtgggaagttctttcctgccttctcttctattagattcagtatatctgg
ttttattttaggttcttgatccacttggacttgagctttgtacaaggaga
aacgaatggatcattttgcatttttctacatgctgactgccagctgaacc
agcaccatttgttgaaaatgttgtctttttttcccccactggatgatttt
ggcttctttgtcaaatatcaagtgatcataggtgtgggtttatttcaggg
tcttcagttctattttattgatctacctgcttgtatcaataccatgcagt
ttttagctctgtagtacagcttgaggtcagggatggtagttccccagaat
ttcttttattcttgatatcctgggacttttgttattctagatgaatttga
aaattgctctttcttttctttctttttttttttgttttgatttttttgtt
ttttgtttttgtttttgttttgttttgttcttacaatgggaaatagggag
tttattttatattattttattttattttttcctttttttattacatattt
tcctcaattacatttcccatgctatcccaaaagtcccccataccctttcc
ccgcactcccctacctacccatttcccactttttggccctggcattcccc
tgtactggggcatataaagttttcataatccaatgagcctctctttccag
tgatggccgactagccatcttttgatacatatgctgctagagtcaagagc
tatggggtactggtttagttcataatgttgttgccactactgggttgcag
aactcttaagcctctggatactttctctgctcctcattggggggccctgt
gattcatccaatagctgaacggtggcatcactatggttttgcctagacct
ggctagctcaagaaacgctaatcagctcctttcagacaaagtcttggcat
atggtatagtgcat
gaattctcttcagatttgcctccatatgaggaagggaaggaaattaagat
taagaaatgtaattttttaatctttcccaactttgttcaattctattggg
agaggatgtctatttcagcttcagcaaatatagattgcttgggtaaagat
gagtttgcaaattcagttttgtcaatttaacatagaaaaagttctgtgag
acttggtttgtttgtagactttaacaaaaagagggatggagacatttatc
agaataatggcaaggttgggggtggttttgagctactatccttaaacaat
gaagaggaagaataatcaaatatacactgaaaacacagccccaagtactc
tgaagtgacatttggctgcaatgctttctgactatatgacaatggaagcc
tgttcagctggcttttcccaaagccagagaaaggtccctgagttaaaatg
tcacaatgtatcttattttccatttctcagttctgccttcacatagaact
ttaaaaataacaactgcaaaaacattgaagaaggtgacagtgggaaagga
cagtttataggtgacttgagctttctgatttgaggcacagaggttacaaa
ttttcactgagaagattcagaggaagaacaaaacaaaaaacaaaaaacat
aatctccccaaaagaccatgatcatgtgatgccctggaaagtgattcttg
gatttcatttggaagcagaaaattaaagaatagataaaaggtttgtaatg
agattattgtagatcagctgaattatatagacttaagtcctttgcccagg
aatagctatcatttggtgacatagaacctgaaatcctgcctaaaggcaag
atttattcattcttcttttgaaactaactcccaaaattagacttgcatag
ttaaatataagctggtctctgtggggcaatgggctatgcacagacagact
ggtctcagtggagttgaggtctgaaccccagtaggacctggtgttcatag
cagccttattttataaatagccagaagctgaaaagacctagatgtcctca
cagaggaatgtatacaaaaatgtggtacattacacatggcaatactactc
agcctattaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_74556423_74557538
seq2: B6Ng01-266L18.g_66_1177 (reverse)

seq1  TTTTAATA-GCTGAGTAGTATTCCATTGTGTAAATGTACCACATTTTTTG  49
      |||||||| ||||||||||||| |  ||||| ||||||||||| ||||||
seq2  TTTTAATAGGCTGAGTAGTATTGCCATGTGT-AATGTACCACA-TTTTTG  48

seq1  TATACATTCCTCTGTTGAGGGACATCTGGGTTCTTTTCAGCTTCTGGCTA  99
      |||||||||||||| ||| |||||||| || |||||||||||||||||||
seq2  TATACATTCCTCTG-TGA-GGACATCTAGG-TCTTTTCAGCTTCTGGCTA  95

seq1  -TTAT-AAATAAGGCTGCTATGAACACCAGGTCCTACTGGGGTTCAAGAC  147
       |||| ||||||||||||||||||||||||||||||||||||||| ||||
seq2  TTTATAAAATAAGGCTGCTATGAACACCAGGTCCTACTGGGGTTC-AGAC  144

seq1  CTCAACTCCACTGGAGACCAGTCTGTCTGTGCATAGCCCATTGCCCCACA  197
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CTCAACTCCACT-GAGACCAGTCTGTCTGTGCATAGCCCATTGCCCCACA  193

seq1  GAGACCAGCTTATATTTAACTATGCAAGTCTAATTTTGGGAGTTAGTTTC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCAGCTTATATTTAACTATGCAAGTCTAATTTTGGGAGTTAGTTTC  243

seq1  AAAAGAAGAATGAATAAATCTTGCCTTTAGGCAGGATTTCAGGTTCTATG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAGAATGAATAAATCTTGCCTTTAGGCAGGATTTCAGGTTCTATG  293

seq1  TCACCAAATGATAGCTATTCCTGGGCAAAGGACTTAAGTCTATATAATTC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCAAATGATAGCTATTCCTGGGCAAAGGACTTAAGTCTATATAATTC  343

seq1  AGCTGATCTACAATAATCTCATTACAAACCTTTTATCTATTCTTTAATTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGATCTACAATAATCTCATTACAAACCTTTTATCTATTCTTTAATTT  393

seq1  TCTGCTTCCAAATGAAATCCAAGAATCACTTTCCAGGGCATCACATGATC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTCCAAATGAAATCCAAGAATCACTTTCCAGGGCATCACATGATC  443

seq1  ATGGTCTTTTGGGGAGATTATGTTTTTTGTTTTTTGTTTTGTTCTTCCTC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTCTTTTGGGGAGATTATGTTTTTTGTTTTTTGTTTTGTTCTTCCTC  493

seq1  TGAATCTTCTCAGTGAAAATTTGTAACCTCTGTGCCTCAAATCAGAAAGC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCTTCTCAGTGAAAATTTGTAACCTCTGTGCCTCAAATCAGAAAGC  543

seq1  TCAAGTCACCTATAAACTGTCCTTTCCCACTGTCACCTTCTTCAATGTTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTCACCTATAAACTGTCCTTTCCCACTGTCACCTTCTTCAATGTTT  593

seq1  TTGCAGTTGTTATTTTTAAAGTTCTATGTGAAGGCAGAACTGAGAAATGG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGTTGTTATTTTTAAAGTTCTATGTGAAGGCAGAACTGAGAAATGG  643

seq1  AAAATAAGATACATTGTGACATTTTAACTCAGGGACCTTTCTCTGGCTTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAGATACATTGTGACATTTTAACTCAGGGACCTTTCTCTGGCTTT  693

seq1  GGGAAAAGCCAGCTGAACAGGCTTCCATTGTCATATAGTCAGAAAGCATT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAAGCCAGCTGAACAGGCTTCCATTGTCATATAGTCAGAAAGCATT  743

seq1  GCAGCCAAATGTCACTTCAGAGTACTTGGGGCTGTGTTTTCAGTGTATAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCAAATGTCACTTCAGAGTACTTGGGGCTGTGTTTTCAGTGTATAT  793

seq1  TTGATTATTCTTCCTCTTCATTGTTTAAGGATAGTAGCTCAAAACCACCC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTATTCTTCCTCTTCATTGTTTAAGGATAGTAGCTCAAAACCACCC  843

seq1  CCAACCTTGCCATTATTCTGATAAATGTCTCCATCCCTCTTTTTGTTAAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCTTGCCATTATTCTGATAAATGTCTCCATCCCTCTTTTTGTTAAA  893

seq1  GTCTACAAACAAACCAAGTCTCACAGAACTTTTTCTATGTTAAATTGACA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTACAAACAAACCAAGTCTCACAGAACTTTTTCTATGTTAAATTGACA  943

seq1  AAACTGAATTTGCAAACTCATCTTTACCCAAGCAATCTATATTTGCTGAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGAATTTGCAAACTCATCTTTACCCAAGCAATCTATATTTGCTGAA  993

seq1  GCTGAAATAGACATCCTCTCCCAATAGAATTGAACAAAGTTGGGAAAGAT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAATAGACATCCTCTCCCAATAGAATTGAACAAAGTTGGGAAAGAT  1043

seq1  TAAAAAATTACATTTCTTAATCTTAATTTCCTTCCCTTCCTCATATGGAG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAATTACATTTCTTAATCTTAATTTCCTTCCCTTCCTCATATGGAG  1093

seq1  GCAAATCTGAAGAGAATTC  1116
      |||||||||||||||||||
seq2  GCAAATCTGAAGAGAATTC  1112