BAC Information

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BAC

Clone NameB6Ng01-266N14
Chromosome4 (Build37)
Map Location 146,139,775 - 146,140,801
singlet/doubletsinglet
Overlap geneOTTMUSG00000010694
Upstream geneLOC666314, LOC545701, OTTMUSG00000010965, LOC666334, LOC545703, LOC384081, LOC100041379, LOC666349, LOC666351, LOC545704, 1700029I01Rik, LOC236069, LOC384084, LOC666386, LOC666390, LOC100041433, LOC433790, LOC433791, Rex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846
Downstream geneLOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266N14.bB6Ng01-266N14.g
ACCGA070139GA070140
length1,0221,174
definitionB6Ng01-266N14.b B6Ng01-266N14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttctaggaaattttttcactttgacattaagttagagactctt
tttctactttatcttctattttattgattctatcttgttttatgttaagg
tccttgatccacctggacttgtgctttgtgcacgtttatacaaatgtatc
tattttcagttttccacatacagactgccagttagaccaacatcaggtat
tgaagattttttcttttatccattatatatttttggcttctttgtcaaag
atcaattgtctgtaagtttgtggtttaattactaggccttcaattgtatt
ccattgatcaatctgtctgtctctgtatcagtacatgcagtttttatcac
tattgctctgaagtaacctgtaacgtttacaaaaagaaatgaagtccact
gttttgtaaacatagcagctcctatgtagtttgcttgggtgtgctttctg
gttgctaaatctagatatagaggctagttttaagtgagaaattacctttc
tgtttttcagttccttcacagactaagtttggctgtcctggaaatatctc
tctggatagatcttgtacacttagttgtgtcttgctctgtctcctgaatc
ctggtgttaaagatgtgtcccatgatacctggacctaacattttcctcat
tagaatttgatctgttccaggcttttcttggactttgaaaactgccttca
ttttcaaactcaaaccagaatcttaagtgggtcaaattttgtctgagatc
atcactctctcacttcctggtactcctttattcctcacaccatgagcctt
gtttttaaaccatgcctttccctttactgactcattagtgtagctacctc
tgtaattttaggtacttggagccccttatacaaatcatattgcatgttta
tattttggatagttgagaaatgttgggcagtgagtgcagggaatttaaag
ggaatccatgtccacagagctcagtgctctgggcaagtggacagcactct
ctatgagcccaggtgggtgtct
gaattcacactgaagccaaaccctataaaagtaatcaatccagtaaagcc
ttttcatgtcactatcacaaaaatgtcataaaagaatttatattgaagag
aaatcctacaaatataagcaatgtgcttagcatcgggtgcatctgtggac
agctagaagtgtctttacagttaggttctagacccagtgaggacactcct
catctgtaggcaacagcactgcccctgtatctgttgccagggcaccaatt
ccctttcacacgcttcccagcctcatggactgaataaaagagtgttccct
cgtcgcacagacccttctcttcttctgacctctcacccctctcagacact
gcttctgtcaataaaacctcccacatgacacctgaagcttggtgtgatat
gtccaggattttgcctgcctgttctaacaaatatgaagaaatgatttctg
ttacccttgtgactcatgcagtattgtttctggtacataaataaattcat
gataaagaagaattctgtaagtaagcttttagatgccttaacaggaatga
atgcattcacaagtaaatgtaggaaagaactcagacaagagaaaaacact
attcatgtgaccatttgatgaggactctagtttccaaaaaaaaaaaaaag
gtcttgctccttctccttttcatcatggctttgaaggtagaatatggttt
acaatgtgcactcaaatgcagtgaagttgatcattaatagttgtgggagt
tttattttgaaatatttgaagttgattttaaagtttaatgtatatgaggc
aaattcattcccaaaactttattaggccattgttatactccttctgtgga
tcctggtcatcttcttttgcattttcacgtggtgatcttccccccacccc
ccacccccgcaatgtataacatggatgctgatcatctctgtgatccattg
tttatttaaatatcagactgtgtatactcatactttccaagtaagtgttt
gtgaagggttttgtgtggttgtctagttttgtttttcagattttccacaa
atcctagagatgatgtttgttatccagcctgatttgatgtcagtcaatag
caagctacaatttgacctcttaattttcatggttagctcggatccatgtc
caatgctgaaaatgtaactctaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_146139775_146140801
seq2: B6Ng01-266N14.b_47_1068

seq1  GAATTCTTTCTAGGAAATTTTTTCACTGTGGCATTAAGTTTGAGACTCTT  50
      ||||||||||||||||||||||||||| || ||||||||| |||||||||
seq2  GAATTCTTTCTAGGAAATTTTTTCACTTTGACATTAAGTTAGAGACTCTT  50

seq1  TTTCTACTTTATCTTCTATTTTATTGATTCTATCTTGTTTTATGTTAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTACTTTATCTTCTATTTTATTGATTCTATCTTGTTTTATGTTAAGG  100

seq1  TCCTTGATCCACCTGGACTTGTGCTTTGTGCACGTTTATACAAATGTATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGATCCACCTGGACTTGTGCTTTGTGCACGTTTATACAAATGTATC  150

seq1  TATTTTCAGTTTTCCACATACAGACTGCCAGTTAGACCAACATCAGGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCAGTTTTCCACATACAGACTGCCAGTTAGACCAACATCAGGTAT  200

seq1  TGAAGATTTTTTCTTTTATCCATTATATATTTTTGGCTTCTTTGTCAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATTTTTTCTTTTATCCATTATATATTTTTGGCTTCTTTGTCAAAG  250

seq1  ATCAATTGTCTGTAAGTTTGTGGTTTAATTACTAGGCCTTCAATTGTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATTGTCTGTAAGTTTGTGGTTTAATTACTAGGCCTTCAATTGTATT  300

seq1  CCATTGATCAATCTGTCTGTCTCTGTATCAGTACATGCAGTTTTTATCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGATCAATCTGTCTGTCTCTGTATCAGTACATGCAGTTTTTATCAC  350

seq1  TATTGCTCTGAAGTAACCTGTAACGTTTACAAAAAGAAATGAAGTCCACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCTCTGAAGTAACCTGTAACGTTTACAAAAAGAAATGAAGTCCACT  400

seq1  GTTTTGTAAACATAGCAGCTCCTATGTAGTTTGCTTGGGTGTGCTTTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTAAACATAGCAGCTCCTATGTAGTTTGCTTGGGTGTGCTTTCTG  450

seq1  GTTGCTAAATCTAGATATAGAGGCTAGTTTTAAGTGAGAAATTACCTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTAAATCTAGATATAGAGGCTAGTTTTAAGTGAGAAATTACCTTTC  500

seq1  TGTTTTTCAGTTCCTTCACAGACTAAGTTTGGCTGTCCTGGAAATATCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTCAGTTCCTTCACAGACTAAGTTTGGCTGTCCTGGAAATATCTC  550

seq1  TCTGGATAGATCTTGTACACTTAGTTGTGTCTTGCTCTGTCTCCTGAATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGATAGATCTTGTACACTTAGTTGTGTCTTGCTCTGTCTCCTGAATC  600

seq1  CTGGTGTTAAAGATGTGTCCCATGATACCTGGACCTAACATTTTCCTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGTTAAAGATGTGTCCCATGATACCTGGACCTAACATTTTCCTCAT  650

seq1  TAGAATTTGATCTGTTCCAGGCTTTTCTTGGACTTTGAAAACTGCCTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTTGATCTGTTCCAGGCTTTTCTTGGACTTTGAAAACTGCCTTCA  700

seq1  TTTTCAAACTCAAACCAGAATCTTAAGTGGGTCAAATTTTGTCTGAGATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAAACTCAAACCAGAATCTTAAGTGGGTCAAATTTTGTCTGAGATC  750

seq1  ATCACTCTCTCACTTCCTGGTACTCCTTTATTCCTCACACCATGAGCCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTCTCTCACTTCCTGGTACTCCTTTATTCCTCACACCATGAGCCTT  800

seq1  GTTTTTAAACCATGCCTTTCCCTTTACTGACTCATTAGTGTAGCTACCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTAAACCATGCCTTTCCCTTTACTGACTCATTAGTGTAGCTACCTC  850

seq1  TGTAATTTTAGGTACTTCGAGCCCCTTATACAAATCATATTGCATGTTTA  900
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TGTAATTTTAGGTACTTGGAGCCCCTTATACAAATCATATTGCATGTTTA  900

seq1  TATTTTGGATAGTTGAGAAATGTTGGGCAGTGAATGCAGGGAATTTAAAG  950
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TATTTTGGATAGTTGAGAAATGTTGGGCAGTGAGTGCAGGGAATTTAAAG  950

seq1  GGAATCCCATGTCCCACCAGAGCACCAGTGCTCTGGGCAAGTGGACAGCA  1000
      ||||| ||||||||   ||||||  |||||||||||||||||||||||||
seq2  GGAAT-CCATGTCC--ACAGAGC-TCAGTGCTCTGGGCAAGTGGACAGCA  996

seq1  CTCTCTATGAGGCCCAGGTGGGTGTCT  1027
      |||||||||| ||||||||||||||||
seq2  CTCTCTATGA-GCCCAGGTGGGTGTCT  1022